RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 PDLIM5Q96HC4 596 aaKnown RBP5.59□□□□□ -1.51
HERPUD1-217ENST00000569429 CENPKQ9BS16 269 aa5.59□□□□□ -1.51
HERPUD1-217ENST00000569429 NAT10Q9H0A0 1025 aaKnown RBP5.59□□□□□ -1.51
HERPUD1-217ENST00000569429 CENPHQ9H3R5 247 aa5.59□□□□□ -1.51
HERPUD1-217ENST00000569429 EMC3Q9P0I2 261 aa5.59□□□□□ -1.51
HERPUD1-217ENST00000569429 FBXO5Q9UKT4 447 aa5.59□□□□□ -1.51
HERPUD1-217ENST00000569429 NOSIPQ9Y314 301 aaKnown RBP5.59□□□□□ -1.51
HERPUD1-217ENST00000569429 CMAHPQ9Y471 501 aa5.59□□□□□ -1.51
HERPUD1-217ENST00000569429 HMX2A2RU54 273 aa5.58□□□□□ -1.52
HERPUD1-217ENST00000569429 AGAP5A6NIR3 686 aa5.58□□□□□ -1.52
HERPUD1-217ENST00000569429 TRIM49D1C9J1S8 452 aa5.58□□□□□ -1.52
HERPUD1-217ENST00000569429 KIF2AO00139 706 aaPredicted RBP5.58□□□□□ -1.52
HERPUD1-217ENST00000569429 MGRN1O60291 552 aa5.58□□□□□ -1.52
HERPUD1-217ENST00000569429 LINGO3P0C6S8 592 aa5.58□□□□□ -1.52
HERPUD1-217ENST00000569429 PCSK2P16519 638 aa5.58□□□□□ -1.52
HERPUD1-217ENST00000569429 STIP1P31948 543 aaKnown RBP5.58□□□□□ -1.52
HERPUD1-217ENST00000569429 RNF144AP50876 292 aaPredicted RBP5.58□□□□□ -1.52
HERPUD1-217ENST00000569429 ZNF41P51814 821 aaPredicted RBP5.58□□□□□ -1.52
HERPUD1-217ENST00000569429 SEC24CP53992 1094 aa5.58□□□□□ -1.52
HERPUD1-217ENST00000569429 GPX6P59796 221 aa5.58□□□□□ -1.52
HERPUD1-217ENST00000569429 BPIFB3P59826 476 aa5.58□□□□□ -1.52
HERPUD1-217ENST00000569429 MRPS35P82673 323 aaKnown RBP5.58□□□□□ -1.52
HERPUD1-217ENST00000569429 SARNPP82979 210 aaKnown RBP5.58□□□□□ -1.52
HERPUD1-217ENST00000569429 EMX1Q04741 257 aaPredicted RBP5.58□□□□□ -1.52
HERPUD1-217ENST00000569429 EGFEM1PQ0D2K5 195 aa5.58□□□□□ -1.52
HERPUD1-217ENST00000569429 THOC5Q13769 683 aaKnown RBP5.58□□□□□ -1.52
HERPUD1-217ENST00000569429 C18orf21Q32NC0 220 aaPredicted RBP5.58□□□□□ -1.52
HERPUD1-217ENST00000569429 LCE2DQ5TA82 110 aaPredicted RBP5.58□□□□□ -1.52
HERPUD1-217ENST00000569429 APOOLQ6UXV4 268 aa5.58□□□□□ -1.52
HERPUD1-217ENST00000569429 SLC44A2Q8IWA5 706 aaPredicted RBP5.58□□□□□ -1.52
HERPUD1-217ENST00000569429 GSPT2Q8IYD1 628 aaKnown RBP5.58□□□□□ -1.52
HERPUD1-217ENST00000569429 RNF214Q8ND24 703 aa5.58□□□□□ -1.52
HERPUD1-217ENST00000569429 OR10S1Q8NGN2 331 aa5.58□□□□□ -1.52
HERPUD1-217ENST00000569429 SLC35B2Q8TB61 432 aa5.58□□□□□ -1.52
HERPUD1-217ENST00000569429 TBC1D15Q8TC07 691 aa5.58□□□□□ -1.52
HERPUD1-217ENST00000569429 SLC9A6Q92581 669 aa5.58□□□□□ -1.52
HERPUD1-217ENST00000569429 ERP27Q96DN0 273 aa5.58□□□□□ -1.52
HERPUD1-217ENST00000569429 EGFL8Q99944 293 aa5.58□□□□□ -1.52
HERPUD1-217ENST00000569429 GAL3ST1Q99999 423 aa5.58□□□□□ -1.52
HERPUD1-217ENST00000569429 MRPL37Q9BZE1 423 aaKnown RBP5.58□□□□□ -1.52
HERPUD1-217ENST00000569429 TBL1XR1Q9BZK7 514 aa5.58□□□□□ -1.52
HERPUD1-217ENST00000569429 TOR3AQ9H497 397 aa5.58□□□□□ -1.52
HERPUD1-217ENST00000569429 GOLPH3Q9H4A6 298 aa5.58□□□□□ -1.52
HERPUD1-217ENST00000569429 MOV10Q9HCE1 1003 aaKnown RBP5.58□□□□□ -1.52
HERPUD1-217ENST00000569429 RAB6BQ9NRW1 208 aa5.58□□□□□ -1.52
HERPUD1-217ENST00000569429 ANO10Q9NW15 660 aa5.58□□□□□ -1.52
HERPUD1-217ENST00000569429 CES1P1Q9UKY3 287 aa5.58□□□□□ -1.52
HERPUD1-217ENST00000569429 OR10H1Q9Y4A9 318 aa5.58□□□□□ -1.52
HERPUD1-217ENST00000569429 ACTL7BQ9Y614 415 aa5.58□□□□□ -1.52
HERPUD1-217ENST00000569429 PKHD1P08F94 4074 aa5.58□□□□□ -1.52
HERPUD1-217ENST00000569429 TRAV40A0A0B4J280 105 aa5.57□□□□□ -1.52
HERPUD1-217ENST00000569429 ZNF816-ZNF321PA0A0X1KG74 233 aa5.57□□□□□ -1.52
HERPUD1-217ENST00000569429 OR6C65A6NJZ3 312 aa5.57□□□□□ -1.52
HERPUD1-217ENST00000569429 CLDN25C9JDP6 229 aa5.57□□□□□ -1.52
HERPUD1-217ENST00000569429 POC1B-GALNT4F8VUJ3 575 aa5.57□□□□□ -1.52
HERPUD1-217ENST00000569429 MRPL33O75394 65 aaKnown RBP5.57□□□□□ -1.52
HERPUD1-217ENST00000569429 JTBO76095 146 aa5.57□□□□□ -1.52
HERPUD1-217ENST00000569429 IGKV3-15P01624 115 aa5.57□□□□□ -1.52
HERPUD1-217ENST00000569429 CSNK2A2P19784 350 aaPredicted RBP5.57□□□□□ -1.52
HERPUD1-217ENST00000569429 LMO1P25800 156 aa5.57□□□□□ -1.52
HERPUD1-217ENST00000569429 MPGP29372 298 aa5.57□□□□□ -1.52
HERPUD1-217ENST00000569429 CRYBB2P43320 205 aa5.57□□□□□ -1.52
HERPUD1-217ENST00000569429 CDKN2DP55273 166 aa5.57□□□□□ -1.52
HERPUD1-217ENST00000569429 ZBED6P86452 979 aa5.57□□□□□ -1.52
HERPUD1-217ENST00000569429 PSG6Q00889 435 aa5.57□□□□□ -1.52
HERPUD1-217ENST00000569429 MYL5Q02045 173 aa5.57□□□□□ -1.52
HERPUD1-217ENST00000569429 TEKQ02763 1124 aa5.57□□□□□ -1.52
HERPUD1-217ENST00000569429 BST1Q10588 318 aa5.57□□□□□ -1.52
HERPUD1-217ENST00000569429 MSMPQ1L6U9 139 aa5.57□□□□□ -1.52
HERPUD1-217ENST00000569429 TECRLQ5HYJ1 363 aa5.57□□□□□ -1.52
HERPUD1-217ENST00000569429 C9orf135Q5VTT2 229 aa5.57□□□□□ -1.52
HERPUD1-217ENST00000569429 ABLIM2Q6H8Q1 611 aa5.57□□□□□ -1.52
HERPUD1-217ENST00000569429 MED27Q6P2C8 311 aa5.57□□□□□ -1.52
HERPUD1-217ENST00000569429 GALNT4Q8N4A0 578 aa5.57□□□□□ -1.52
HERPUD1-217ENST00000569429 BHLHE22Q8NFJ8 381 aaPredicted RBP5.57□□□□□ -1.52
HERPUD1-217ENST00000569429 OR7G3Q8NG95 312 aa5.57□□□□□ -1.52
HERPUD1-217ENST00000569429 OR4F17Q8NGA8 305 aa5.57□□□□□ -1.52
HERPUD1-217ENST00000569429 WDR20Q8TBZ3 569 aa5.57□□□□□ -1.52
HERPUD1-217ENST00000569429 ZNF675Q8TD23 568 aa5.57□□□□□ -1.52
HERPUD1-217ENST00000569429 CALML6Q8TD86 181 aa5.57□□□□□ -1.52
HERPUD1-217ENST00000569429 RAB1CQ92928 201 aa5.57□□□□□ -1.52
HERPUD1-217ENST00000569429 TIMD4Q96H15 378 aa5.57□□□□□ -1.52
HERPUD1-217ENST00000569429 OR4F4Q96R69 305 aa5.57□□□□□ -1.52
HERPUD1-217ENST00000569429 RBBP8Q99708 897 aa5.57□□□□□ -1.52
HERPUD1-217ENST00000569429 MMP28Q9H239 520 aa5.57□□□□□ -1.52
HERPUD1-217ENST00000569429 ACSS3Q9H6R3 686 aa5.57□□□□□ -1.52
HERPUD1-217ENST00000569429 FBLN5Q9UBX5 448 aa5.57□□□□□ -1.52
HERPUD1-217ENST00000569429 ZKSCAN5Q9Y2L8 839 aa5.57□□□□□ -1.52
HERPUD1-217ENST00000569429 OARD1Q9Y530 152 aa5.57□□□□□ -1.52
HERPUD1-217ENST00000569429 ARPC4-TTLL3A0A0A6YYG9 625 aa5.56□□□□□ -1.52
HERPUD1-217ENST00000569429 A0A1W2PNR3 127 aa5.56□□□□□ -1.52
HERPUD1-217ENST00000569429 SDR42E2A6NKP2 422 aa5.56□□□□□ -1.52
HERPUD1-217ENST00000569429 ZNF716A6NP11 495 aa5.56□□□□□ -1.52
HERPUD1-217ENST00000569429 SMTNL1A8MU46 457 aa5.56□□□□□ -1.52
HERPUD1-217ENST00000569429 A8MXK9 166 aa5.56□□□□□ -1.52
HERPUD1-217ENST00000569429 ALG1L2C9J202 215 aa5.56□□□□□ -1.52
HERPUD1-217ENST00000569429 GPR171O14626 319 aa5.56□□□□□ -1.52
HERPUD1-217ENST00000569429 ZNF195O14628 629 aa5.56□□□□□ -1.52
HERPUD1-217ENST00000569429 CDC14BO60729 498 aa5.56□□□□□ -1.52
HERPUD1-217ENST00000569429 NME6O75414 186 aaPredicted RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms