RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 LRIG3Q6UXM1 1119 aa10.93□□□□□ -0.66
SNX29-207ENST00000568949 TRIM46Q7Z4K8 759 aa10.93□□□□□ -0.66
SNX29-207ENST00000568949 CNPY4Q8N129 248 aa10.93□□□□□ -0.66
SNX29-207ENST00000568949 UBE2J2Q8N2K1 259 aa10.93□□□□□ -0.66
SNX29-207ENST00000568949 SGMS2Q8NHU3 365 aa10.93□□□□□ -0.66
SNX29-207ENST00000568949 L3HYPDHQ96EM0 354 aa10.93□□□□□ -0.66
SNX29-207ENST00000568949 METTL2AQ96IZ6 378 aaKnown RBP10.93□□□□□ -0.66
SNX29-207ENST00000568949 SORCS2Q96PQ0 1159 aa10.93□□□□□ -0.66
SNX29-207ENST00000568949 OR5B2Q96R09 309 aa10.93□□□□□ -0.66
SNX29-207ENST00000568949 KCNA7Q96RP8 456 aa10.93□□□□□ -0.66
SNX29-207ENST00000568949 STACQ99469 402 aa10.93□□□□□ -0.66
SNX29-207ENST00000568949 DUSP22Q9NRW4 184 aa10.93□□□□□ -0.66
SNX29-207ENST00000568949 ASB6Q9NWX5 421 aa10.93□□□□□ -0.66
SNX29-207ENST00000568949 GIN1Q9NXP7 522 aa10.93□□□□□ -0.66
SNX29-207ENST00000568949 MALT1Q9UDY8 824 aa10.93□□□□□ -0.66
SNX29-207ENST00000568949 TENM1Q9UKZ4 2725 aa10.92□□□□□ -0.66
SNX29-207ENST00000568949 A0A1W2PR80 420 aa10.92□□□□□ -0.66
SNX29-207ENST00000568949 TRIM49D1C9J1S8 452 aa10.92□□□□□ -0.66
SNX29-207ENST00000568949 GTPBP1O00178 669 aaKnown RBP10.92□□□□□ -0.66
SNX29-207ENST00000568949 KCNAB3O43448 404 aa10.92□□□□□ -0.66
SNX29-207ENST00000568949 TBX19O60806 448 aa10.92□□□□□ -0.66
SNX29-207ENST00000568949 RSL1D1O76021 490 aaKnown RBP10.92□□□□□ -0.66
SNX29-207ENST00000568949 H6PDO95479 791 aa10.92□□□□□ -0.66
SNX29-207ENST00000568949 IGHV3-9P01782 118 aa10.92□□□□□ -0.66
SNX29-207ENST00000568949 EGR1P18146 543 aa10.92□□□□□ -0.66
SNX29-207ENST00000568949 ATP6V1C1P21283 382 aa10.92□□□□□ -0.66
SNX29-207ENST00000568949 ATP5F1P24539 256 aaPredicted RBP10.92□□□□□ -0.66
SNX29-207ENST00000568949 FRKP42685 505 aaPredicted RBP10.92□□□□□ -0.66
SNX29-207ENST00000568949 PRKAA2P54646 552 aa10.92□□□□□ -0.66
SNX29-207ENST00000568949 C2orf54Q08AI8 447 aa10.92□□□□□ -0.66
SNX29-207ENST00000568949 ABLIM2Q6H8Q1 611 aa10.92□□□□□ -0.66
SNX29-207ENST00000568949 TMPPEQ6ZT21 453 aa10.92□□□□□ -0.66
SNX29-207ENST00000568949 SZRD1Q7Z422 152 aa10.92□□□□□ -0.66
SNX29-207ENST00000568949 SLC22A9Q8IVM8 553 aa10.92□□□□□ -0.66
SNX29-207ENST00000568949 C17orf78Q8N4C9 275 aa10.92□□□□□ -0.66
SNX29-207ENST00000568949 WDR31Q8NA23 367 aa10.92□□□□□ -0.66
SNX29-207ENST00000568949 TOR1AIP2Q8NFQ8 470 aa10.92□□□□□ -0.66
SNX29-207ENST00000568949 OR5W2Q8NH69 310 aa10.92□□□□□ -0.66
SNX29-207ENST00000568949 JADE3Q92613 823 aa10.92□□□□□ -0.66
SNX29-207ENST00000568949 CIDECQ96AQ7 238 aaPredicted RBP10.92□□□□□ -0.66
SNX29-207ENST00000568949 ZNF524Q96C55 264 aa10.92□□□□□ -0.66
SNX29-207ENST00000568949 C16orf58Q96GQ5 468 aa10.92□□□□□ -0.66
SNX29-207ENST00000568949 EGLN2Q96KS0 407 aa10.92□□□□□ -0.66
SNX29-207ENST00000568949 PAFAH2Q99487 392 aa10.92□□□□□ -0.66
SNX29-207ENST00000568949 C1QTNF6Q9BXI9 259 aa10.92□□□□□ -0.66
SNX29-207ENST00000568949 BPESC1Q9GZL8 116 aa10.92□□□□□ -0.66
SNX29-207ENST00000568949 PIGUQ9H490 435 aa10.92□□□□□ -0.66
SNX29-207ENST00000568949 ACSS1Q9NUB1 689 aaPredicted RBP10.92□□□□□ -0.66
SNX29-207ENST00000568949 NINJ2Q9NZG7 142 aa10.92□□□□□ -0.66
SNX29-207ENST00000568949 TMEFF2Q9UIK5 374 aaPredicted RBP10.92□□□□□ -0.66
SNX29-207ENST00000568949 ZNF180Q9UJW8 692 aa10.92□□□□□ -0.66
SNX29-207ENST00000568949 NOSIPQ9Y314 301 aaKnown RBP10.92□□□□□ -0.66
SNX29-207ENST00000568949 NPIPB8E9PQR5 432 aa10.91□□□□□ -0.66
SNX29-207ENST00000568949 GPR171O14626 319 aa10.91□□□□□ -0.66
SNX29-207ENST00000568949 EIF4E2O60573 245 aaKnown RBP10.91□□□□□ -0.66
SNX29-207ENST00000568949 ITGA5P08648 1049 aa10.91□□□□□ -0.66
SNX29-207ENST00000568949 COMPP49747 757 aaPredicted RBP10.91□□□□□ -0.66
SNX29-207ENST00000568949 DIO1P49895 249 aa10.91□□□□□ -0.66
SNX29-207ENST00000568949 FOXA1P55317 472 aa10.91□□□□□ -0.66
SNX29-207ENST00000568949 SNRPD2P62316 118 aaKnown RBP10.91□□□□□ -0.66
SNX29-207ENST00000568949 CSNK2A1P68400 391 aaPredicted RBP10.91□□□□□ -0.66
SNX29-207ENST00000568949 QPRTQ15274 297 aa10.91□□□□□ -0.66
SNX29-207ENST00000568949 CARTPTQ16568 116 aa10.91□□□□□ -0.66
SNX29-207ENST00000568949 FAM174BQ3ZCQ3 159 aa10.91□□□□□ -0.66
SNX29-207ENST00000568949 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.91□□□□□ -0.66
SNX29-207ENST00000568949 ANKRD26P1Q6NSI1 321 aa10.91□□□□□ -0.66
SNX29-207ENST00000568949 MTDHQ86UE4 582 aaKnown RBP10.91□□□□□ -0.66
SNX29-207ENST00000568949 LCA5Q86VQ0 697 aa10.91□□□□□ -0.66
SNX29-207ENST00000568949 RELL1Q8IUW5 271 aa10.91□□□□□ -0.66
SNX29-207ENST00000568949 C1orf162Q8NEQ5 155 aaPredicted RBP10.91□□□□□ -0.66
SNX29-207ENST00000568949 HPS1Q92902 700 aa10.91□□□□□ -0.66
SNX29-207ENST00000568949 PPCDCQ96CD2 204 aa10.91□□□□□ -0.66
SNX29-207ENST00000568949 FBXO17Q96EF6 278 aa10.91□□□□□ -0.66
SNX29-207ENST00000568949 OTUB1Q96FW1 271 aaPredicted RBP10.91□□□□□ -0.66
SNX29-207ENST00000568949 SOX7Q9BT81 388 aa10.91□□□□□ -0.66
SNX29-207ENST00000568949 BHLHE41Q9C0J9 482 aaPredicted RBP10.91□□□□□ -0.66
SNX29-207ENST00000568949 ANKZF1Q9H8Y5 726 aa10.91□□□□□ -0.66
SNX29-207ENST00000568949 RRAGDQ9NQL2 400 aaPredicted RBP10.91□□□□□ -0.66
SNX29-207ENST00000568949 SERINC1Q9NRX5 453 aa10.91□□□□□ -0.66
SNX29-207ENST00000568949 ZDHHC18Q9NUE0 388 aa10.91□□□□□ -0.66
SNX29-207ENST00000568949 TMEM216Q9P0N5 145 aa10.91□□□□□ -0.66
SNX29-207ENST00000568949 AMDHD2Q9Y303 409 aa10.91□□□□□ -0.66
SNX29-207ENST00000568949 DTNAQ9Y4J8 743 aa10.91□□□□□ -0.66
SNX29-207ENST00000568949 TRAF6Q9Y4K3 522 aa10.91□□□□□ -0.66
SNX29-207ENST00000568949 ZNF716A6NP11 495 aa10.9□□□□□ -0.66
SNX29-207ENST00000568949 ATP6V1G2-DDX39BF2Z307 99 aa10.9□□□□□ -0.66
SNX29-207ENST00000568949 NPIPB9F8W1W9 429 aa10.9□□□□□ -0.66
SNX29-207ENST00000568949 H3BQF6 201 aa10.9□□□□□ -0.66
SNX29-207ENST00000568949 PDLIM1O00151 329 aa10.9□□□□□ -0.66
SNX29-207ENST00000568949 SULT2B1O00204 365 aa10.9□□□□□ -0.66
SNX29-207ENST00000568949 ZNF264O43296 627 aa10.9□□□□□ -0.66
SNX29-207ENST00000568949 DNAJA2O60884 412 aa10.9□□□□□ -0.66
SNX29-207ENST00000568949 PRPH2P23942 346 aa10.9□□□□□ -0.66
SNX29-207ENST00000568949 CHN2P52757 468 aa10.9□□□□□ -0.66
SNX29-207ENST00000568949 SLC16A1P53985 500 aa10.9□□□□□ -0.66
SNX29-207ENST00000568949 ATP12AP54707 1039 aa10.9□□□□□ -0.66
SNX29-207ENST00000568949 CBFBQ13951 182 aa10.9□□□□□ -0.66
SNX29-207ENST00000568949 KIAA0040Q15053 153 aa10.9□□□□□ -0.66
SNX29-207ENST00000568949 ZSWIM7Q19AV6 140 aa10.9□□□□□ -0.66
SNX29-207ENST00000568949 NDUFAF6Q330K2 333 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms