RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 HLA-DMAP28067 261 aa16.37■□□□□ 0.21
CMTM3-214ENST00000567572 MAP2K3P46734 347 aa16.37■□□□□ 0.21
CMTM3-214ENST00000567572 CSNK1EP49674 416 aaKnown RBP16.37■□□□□ 0.21
CMTM3-214ENST00000567572 FXYD6P3P58550 94 aa16.37■□□□□ 0.21
CMTM3-214ENST00000567572 ACTC1P68032 377 aa16.37■□□□□ 0.21
CMTM3-214ENST00000567572 ACTA1P68133 377 aa16.37■□□□□ 0.21
CMTM3-214ENST00000567572 SHC2P98077 582 aa16.37■□□□□ 0.21
CMTM3-214ENST00000567572 POU4F2Q12837 409 aa16.37■□□□□ 0.21
CMTM3-214ENST00000567572 QPRTQ15274 297 aa16.37■□□□□ 0.21
CMTM3-214ENST00000567572 TAB1Q15750 504 aa16.37■□□□□ 0.21
CMTM3-214ENST00000567572 ZFP69Q49AA0 526 aa16.37■□□□□ 0.21
CMTM3-214ENST00000567572 PLBD1Q6P4A8 553 aa16.37■□□□□ 0.21
CMTM3-214ENST00000567572 OGFOD3Q6PK18 319 aa16.37■□□□□ 0.21
CMTM3-214ENST00000567572 KLBQ86Z14 1044 aa16.37■□□□□ 0.21
CMTM3-214ENST00000567572 OR4N5Q8IXE1 308 aa16.37■□□□□ 0.21
CMTM3-214ENST00000567572 ZFP41Q8N8Y5 198 aa16.37■□□□□ 0.21
CMTM3-214ENST00000567572 OR51G2Q8NGK0 314 aa16.37■□□□□ 0.21
CMTM3-214ENST00000567572 BPIFA2Q96DR5 249 aa16.37■□□□□ 0.21
CMTM3-214ENST00000567572 AHCYL2Q96HN2 611 aaKnown RBP16.37■□□□□ 0.21
CMTM3-214ENST00000567572 ST6GAL2Q96JF0 529 aa16.37■□□□□ 0.21
CMTM3-214ENST00000567572 FRMD6Q96NE9 622 aa16.37■□□□□ 0.21
CMTM3-214ENST00000567572 DUSP15Q9H1R2 295 aaPredicted RBP16.37■□□□□ 0.21
CMTM3-214ENST00000567572 TMEM27Q9HBJ8 222 aa16.37■□□□□ 0.21
CMTM3-214ENST00000567572 RBFOX1Q9NWB1 397 aaKnown RBP16.37■□□□□ 0.21
CMTM3-214ENST00000567572 HAO2Q9NYQ3 351 aa16.37■□□□□ 0.21
CMTM3-214ENST00000567572 COMMD3Q9UBI1 195 aa16.37■□□□□ 0.21
CMTM3-214ENST00000567572 ABCA7Q8IZY2 2146 aa16.37■□□□□ 0.21
CMTM3-214ENST00000567572 TP53BP1Q12888 1972 aaPredicted RBP16.37■□□□□ 0.21
CMTM3-214ENST00000567572 CENPVL1A0A0U1RR11 272 aa16.37■□□□□ 0.21
CMTM3-214ENST00000567572 SLC9B1P1A6NJY1 282 aa16.37■□□□□ 0.21
CMTM3-214ENST00000567572 PRR23D1E9PI22 279 aaPredicted RBP16.37■□□□□ 0.21
CMTM3-214ENST00000567572 CHP2O43745 196 aa16.37■□□□□ 0.21
CMTM3-214ENST00000567572 SLC2A10O95528 541 aa16.37■□□□□ 0.21
CMTM3-214ENST00000567572 PRR23D2P0DMB1 279 aaPredicted RBP16.37■□□□□ 0.21
CMTM3-214ENST00000567572 MAKP20794 623 aa16.37■□□□□ 0.21
CMTM3-214ENST00000567572 DRD5P21918 477 aa16.37■□□□□ 0.21
CMTM3-214ENST00000567572 MYL9P24844 172 aa16.37■□□□□ 0.21
CMTM3-214ENST00000567572 DMWDQ09019 674 aa16.37■□□□□ 0.21
CMTM3-214ENST00000567572 MGAT2Q10469 447 aa16.37■□□□□ 0.21
CMTM3-214ENST00000567572 DEFB133Q30KQ1 61 aa16.37■□□□□ 0.21
CMTM3-214ENST00000567572 DEFB110Q30KQ9 67 aa16.37■□□□□ 0.21
CMTM3-214ENST00000567572 CCNJQ5T5M9 372 aa16.37■□□□□ 0.21
CMTM3-214ENST00000567572 TPRA1Q86W33 373 aa16.37■□□□□ 0.21
CMTM3-214ENST00000567572 Q8N402 240 aa16.37■□□□□ 0.21
CMTM3-214ENST00000567572 DUSP18Q8NEJ0 188 aa16.37■□□□□ 0.21
CMTM3-214ENST00000567572 KISS1RQ969F8 398 aaPredicted RBP16.37■□□□□ 0.21
CMTM3-214ENST00000567572 SLC38A3Q99624 504 aa16.37■□□□□ 0.21
CMTM3-214ENST00000567572 HDHD5Q9BXW7 423 aa16.37■□□□□ 0.21
CMTM3-214ENST00000567572 STARD5Q9NSY2 213 aa16.37■□□□□ 0.21
CMTM3-214ENST00000567572 SIGLEC7Q9Y286 467 aa16.37■□□□□ 0.21
CMTM3-214ENST00000567572 RIIAD1A6NNX1 92 aa16.36■□□□□ 0.21
CMTM3-214ENST00000567572 PLA2G10O15496 165 aa16.36■□□□□ 0.21
CMTM3-214ENST00000567572 SDC3O75056 442 aa16.36■□□□□ 0.21
CMTM3-214ENST00000567572 MT-ND5P03915 603 aa16.36■□□□□ 0.21
CMTM3-214ENST00000567572 CTSBP07858 339 aa16.36■□□□□ 0.21
CMTM3-214ENST00000567572 PRKAR1AP10644 381 aa16.36■□□□□ 0.21
CMTM3-214ENST00000567572 PRG2P13727 222 aa16.36■□□□□ 0.21
CMTM3-214ENST00000567572 RAB38P57729 211 aa16.36■□□□□ 0.21
CMTM3-214ENST00000567572 HBMQ6B0K9 141 aa16.36■□□□□ 0.21
CMTM3-214ENST00000567572 WDR88Q6ZMY6 472 aa16.36■□□□□ 0.21
CMTM3-214ENST00000567572 TMEM91Q6ZNR0 172 aa16.36■□□□□ 0.21
CMTM3-214ENST00000567572 MCATQ8IVS2 390 aaKnown RBP16.36■□□□□ 0.21
CMTM3-214ENST00000567572 CA13Q8N1Q1 262 aa16.36■□□□□ 0.21
CMTM3-214ENST00000567572 OR5T3Q8NGG3 340 aa16.36■□□□□ 0.21
CMTM3-214ENST00000567572 SLC7A6Q92536 515 aa16.36■□□□□ 0.21
CMTM3-214ENST00000567572 NDC1Q9BTX1 674 aa16.36■□□□□ 0.21
CMTM3-214ENST00000567572 ZNF426Q9BUY5 554 aa16.36■□□□□ 0.21
CMTM3-214ENST00000567572 UCKL1Q9NWZ5 548 aa16.36■□□□□ 0.21
CMTM3-214ENST00000567572 KCNE5Q9UJ90 142 aa16.36■□□□□ 0.21
CMTM3-214ENST00000567572 N6AMT1Q9Y5N5 214 aa16.36■□□□□ 0.21
CMTM3-214ENST00000567572 DAPL1A0PJW8 107 aa16.35■□□□□ 0.21
CMTM3-214ENST00000567572 CENPXA8MT69 81 aa16.35■□□□□ 0.21
CMTM3-214ENST00000567572 PIAS2O75928 621 aa16.35■□□□□ 0.21
CMTM3-214ENST00000567572 SLC35E2P0CK97 266 aa16.35■□□□□ 0.21
CMTM3-214ENST00000567572 NR4A2P43354 598 aa16.35■□□□□ 0.21
CMTM3-214ENST00000567572 AFF3P51826 1226 aaKnown RBP16.35■□□□□ 0.21
CMTM3-214ENST00000567572 DAB2P98082 770 aa16.35■□□□□ 0.21
CMTM3-214ENST00000567572 FOXK2Q01167 660 aa16.35■□□□□ 0.21
CMTM3-214ENST00000567572 SF3A2Q15428 464 aaKnown RBP16.35■□□□□ 0.21
CMTM3-214ENST00000567572 PRTGQ2VWP7 1150 aa16.35■□□□□ 0.21
CMTM3-214ENST00000567572 C14orf28Q4W4Y0 310 aa16.35■□□□□ 0.21
CMTM3-214ENST00000567572 SHISA5Q8N114 240 aa16.35■□□□□ 0.21
CMTM3-214ENST00000567572 TMEM52Q8NDY8 209 aa16.35■□□□□ 0.21
CMTM3-214ENST00000567572 SIMC1Q8NDZ2 872 aa16.35■□□□□ 0.21
CMTM3-214ENST00000567572 TCTN2Q96GX1 697 aa16.35■□□□□ 0.21
CMTM3-214ENST00000567572 KCNJ15Q99712 375 aa16.35■□□□□ 0.21
CMTM3-214ENST00000567572 MAP3K3Q99759 626 aa16.35■□□□□ 0.21
CMTM3-214ENST00000567572 IER2Q9BTL4 223 aa16.35■□□□□ 0.21
CMTM3-214ENST00000567572 LMF2Q9BU23 707 aaKnown RBP16.35■□□□□ 0.21
CMTM3-214ENST00000567572 TRIM2Q9C040 744 aa16.35■□□□□ 0.21
CMTM3-214ENST00000567572 RNF32Q9H0A6 362 aa16.35■□□□□ 0.21
CMTM3-214ENST00000567572 SPAG17Q6Q759 2223 aa16.35■□□□□ 0.21
CMTM3-214ENST00000567572 A0A0B4J2E0 115 aa16.35■□□□□ 0.21
CMTM3-214ENST00000567572 A0A1B0GX12 115 aa16.35■□□□□ 0.21
CMTM3-214ENST00000567572 BLACEA4D250 179 aa16.35■□□□□ 0.21
CMTM3-214ENST00000567572 BCAT2O15382 392 aaPredicted RBP16.35■□□□□ 0.21
CMTM3-214ENST00000567572 PLPP2O43688 288 aa16.35■□□□□ 0.21
CMTM3-214ENST00000567572 HPGDSO60760 199 aa16.35■□□□□ 0.21
CMTM3-214ENST00000567572 ZNF3P17036 446 aa16.35■□□□□ 0.21
CMTM3-214ENST00000567572 IFITM2Q01629 132 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms