RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 G6PDP11413 515 aa16.55■□□□□ 0.24
LINC01238-205ENST00000567549 HBA1P69905 142 aa16.55■□□□□ 0.24
LINC01238-205ENST00000567549 TXNL4AP83876 142 aaKnown RBP16.55■□□□□ 0.24
LINC01238-205ENST00000567549 RASGEF1BQ0VAM2 473 aa16.55■□□□□ 0.24
LINC01238-205ENST00000567549 GPR68Q15743 365 aa16.55■□□□□ 0.24
LINC01238-205ENST00000567549 ZNF141Q15928 474 aa16.55■□□□□ 0.24
LINC01238-205ENST00000567549 ARHGAP11BQ3KRB8 267 aa16.55■□□□□ 0.24
LINC01238-205ENST00000567549 ALKBH2Q6NS38 261 aa16.55■□□□□ 0.24
LINC01238-205ENST00000567549 C6orf120Q7Z4R8 191 aa16.55■□□□□ 0.24
LINC01238-205ENST00000567549 LRRC34Q8IZ02 419 aa16.55■□□□□ 0.24
LINC01238-205ENST00000567549 KRTCAP2Q8N6L1 136 aa16.55■□□□□ 0.24
LINC01238-205ENST00000567549 OR5AK3PQ8NH89 298 aa16.55■□□□□ 0.24
LINC01238-205ENST00000567549 OR5B2Q96R09 309 aa16.55■□□□□ 0.24
LINC01238-205ENST00000567549 NPAS1Q99742 590 aa16.55■□□□□ 0.24
LINC01238-205ENST00000567549 SRXN1Q9BYN0 137 aa16.55■□□□□ 0.24
LINC01238-205ENST00000567549 DPY30Q9C005 99 aa16.55■□□□□ 0.24
LINC01238-205ENST00000567549 ZDHHC2Q9UIJ5 367 aa16.55■□□□□ 0.24
LINC01238-205ENST00000567549 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.55■□□□□ 0.24
LINC01238-205ENST00000567549 HIVEP2P31629 2446 aa16.55■□□□□ 0.24
LINC01238-205ENST00000567549 NPIPA5A0A0B4J1W7 369 aa16.54■□□□□ 0.24
LINC01238-205ENST00000567549 RNF103-CHMP3A0A140T963 221 aa16.54■□□□□ 0.24
LINC01238-205ENST00000567549 A0A1W2PP18 115 aa16.54■□□□□ 0.24
LINC01238-205ENST00000567549 ZNF724A8MTY0 619 aa16.54■□□□□ 0.24
LINC01238-205ENST00000567549 NPIPA7E9PJI5 369 aa16.54■□□□□ 0.24
LINC01238-205ENST00000567549 BIRC5O15392 142 aa16.54■□□□□ 0.24
LINC01238-205ENST00000567549 CLOCKO15516 846 aa16.54■□□□□ 0.24
LINC01238-205ENST00000567549 CYP7B1O75881 506 aa16.54■□□□□ 0.24
LINC01238-205ENST00000567549 NTN1O95631 604 aa16.54■□□□□ 0.24
LINC01238-205ENST00000567549 ADAP00813 363 aa16.54■□□□□ 0.24
LINC01238-205ENST00000567549 NPIPA8P0DM63 369 aa16.54■□□□□ 0.24
LINC01238-205ENST00000567549 NID1P14543 1247 aa16.54■□□□□ 0.24
LINC01238-205ENST00000567549 IDUAP35475 653 aa16.54■□□□□ 0.24
LINC01238-205ENST00000567549 APOBEC1P41238 236 aaKnown RBP16.54■□□□□ 0.24
LINC01238-205ENST00000567549 OR3A2P47893 321 aa16.54■□□□□ 0.24
LINC01238-205ENST00000567549 CLNS1AP54105 237 aaKnown RBP16.54■□□□□ 0.24
LINC01238-205ENST00000567549 CBX1P83916 185 aa16.54■□□□□ 0.24
LINC01238-205ENST00000567549 TTMPQ5BVD1 217 aa16.54■□□□□ 0.24
LINC01238-205ENST00000567549 NCMAPQ5T1S8 102 aa16.54■□□□□ 0.24
LINC01238-205ENST00000567549 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.54■□□□□ 0.24
LINC01238-205ENST00000567549 PDZK1Q5T2W1 519 aa16.54■□□□□ 0.24
LINC01238-205ENST00000567549 C22orf34Q6ZV56 151 aa16.54■□□□□ 0.24
LINC01238-205ENST00000567549 BHLHA15Q7RTS1 189 aaPredicted RBP16.54■□□□□ 0.24
LINC01238-205ENST00000567549 GALNT5Q7Z7M9 940 aa16.54■□□□□ 0.24
LINC01238-205ENST00000567549 ZNF100Q8IYN0 542 aa16.54■□□□□ 0.24
LINC01238-205ENST00000567549 ARFGAP2Q8N6H7 521 aa16.54■□□□□ 0.24
LINC01238-205ENST00000567549 OR8J2Q8NGG1 315 aa16.54■□□□□ 0.24
LINC01238-205ENST00000567549 OR4A15Q8NGL6 344 aa16.54■□□□□ 0.24
LINC01238-205ENST00000567549 MIPOL1Q8TD10 442 aa16.54■□□□□ 0.24
LINC01238-205ENST00000567549 RADILQ96JH8 1075 aa16.54■□□□□ 0.24
LINC01238-205ENST00000567549 COQ10BQ9H8M1 238 aa16.54■□□□□ 0.24
LINC01238-205ENST00000567549 BARX1Q9HBU1 254 aaPredicted RBP16.54■□□□□ 0.24
LINC01238-205ENST00000567549 GIMAP2Q9UG22 337 aa16.54■□□□□ 0.24
LINC01238-205ENST00000567549 LAMP3Q9UQV4 416 aa16.54■□□□□ 0.24
LINC01238-205ENST00000567549 ROS1P08922 2347 aa16.54■□□□□ 0.24
LINC01238-205ENST00000567549 NSD1Q96L73 2696 aaPredicted RBP16.54■□□□□ 0.24
LINC01238-205ENST00000567549 SULT2B1O00204 365 aa16.53■□□□□ 0.24
LINC01238-205ENST00000567549 GPR171O14626 319 aa16.53■□□□□ 0.24
LINC01238-205ENST00000567549 DNPH1O43598 174 aa16.53■□□□□ 0.24
LINC01238-205ENST00000567549 CYTIPO60759 359 aa16.53■□□□□ 0.24
LINC01238-205ENST00000567549 SERPINE1P05121 402 aa16.53■□□□□ 0.24
LINC01238-205ENST00000567549 UQCRC2P22695 453 aa16.53■□□□□ 0.24
LINC01238-205ENST00000567549 CLK1P49759 484 aaKnown RBP16.53■□□□□ 0.24
LINC01238-205ENST00000567549 LRRC74AQ0VAA2 488 aa16.53■□□□□ 0.24
LINC01238-205ENST00000567549 TIGD2Q4W5G0 525 aa16.53■□□□□ 0.24
LINC01238-205ENST00000567549 NUFIP2Q7Z417 695 aaKnown RBP16.53■□□□□ 0.24
LINC01238-205ENST00000567549 TRIML2Q8N7C3 387 aa16.53■□□□□ 0.24
LINC01238-205ENST00000567549 OR5D16Q8NGK9 328 aa16.53■□□□□ 0.24
LINC01238-205ENST00000567549 ZNF563Q8TA94 476 aa16.53■□□□□ 0.24
LINC01238-205ENST00000567549 IGFBPL1Q8WX77 278 aa16.53■□□□□ 0.24
LINC01238-205ENST00000567549 ZBTB9Q96C00 473 aa16.53■□□□□ 0.24
LINC01238-205ENST00000567549 TLCD1Q96CP7 247 aa16.53■□□□□ 0.24
LINC01238-205ENST00000567549 C3orf30Q96M34 536 aa16.53■□□□□ 0.24
LINC01238-205ENST00000567549 PSD2Q9BQI7 771 aa16.53■□□□□ 0.24
LINC01238-205ENST00000567549 THUMPD3Q9BV44 507 aaKnown RBP16.53■□□□□ 0.24
LINC01238-205ENST00000567549 ZNF350Q9GZX5 532 aa16.53■□□□□ 0.24
LINC01238-205ENST00000567549 PRSS51A0A1B0GVH4 220 aa16.52■□□□□ 0.24
LINC01238-205ENST00000567549 TRIM64A6NGJ6 449 aa16.52■□□□□ 0.24
LINC01238-205ENST00000567549 TRIM64BA6NI03 449 aa16.52■□□□□ 0.24
LINC01238-205ENST00000567549 TM9SF1O15321 606 aa16.52■□□□□ 0.24
LINC01238-205ENST00000567549 UQCRBP14927 111 aa16.52■□□□□ 0.24
LINC01238-205ENST00000567549 SHC1P29353 583 aa16.52■□□□□ 0.24
LINC01238-205ENST00000567549 HTR3AP46098 478 aa16.52■□□□□ 0.24
LINC01238-205ENST00000567549 KHKP50053 298 aa16.52■□□□□ 0.24
LINC01238-205ENST00000567549 MERTKQ12866 999 aa16.52■□□□□ 0.24
LINC01238-205ENST00000567549 SKP2Q13309 424 aa16.52■□□□□ 0.24
LINC01238-205ENST00000567549 GNA13Q14344 377 aa16.52■□□□□ 0.24
LINC01238-205ENST00000567549 PDK3Q15120 406 aa16.52■□□□□ 0.24
LINC01238-205ENST00000567549 PPA1Q15181 289 aa16.52■□□□□ 0.24
LINC01238-205ENST00000567549 TAB1Q15750 504 aa16.52■□□□□ 0.24
LINC01238-205ENST00000567549 TOMM34Q15785 309 aaPredicted RBP16.52■□□□□ 0.24
LINC01238-205ENST00000567549 SYT14P1Q58G82 188 aa16.52■□□□□ 0.24
LINC01238-205ENST00000567549 TIMM23BQ5SRD1 257 aa16.52■□□□□ 0.24
LINC01238-205ENST00000567549 C1QTNF12Q5T7M4 302 aa16.52■□□□□ 0.24
LINC01238-205ENST00000567549 DNAJC14Q6Y2X3 702 aaPredicted RBP16.52■□□□□ 0.24
LINC01238-205ENST00000567549 PIWIL2Q8TC59 973 aaKnown RBP16.52■□□□□ 0.24
LINC01238-205ENST00000567549 TESCQ96BS2 214 aa16.52■□□□□ 0.24
LINC01238-205ENST00000567549 SSU72Q9NP77 194 aaKnown RBP16.52■□□□□ 0.24
LINC01238-205ENST00000567549 ACER3Q9NUN7 267 aa16.52■□□□□ 0.24
LINC01238-205ENST00000567549 PRDM4Q9UKN5 801 aa16.52■□□□□ 0.24
LINC01238-205ENST00000567549 MGAT4BQ9UQ53 548 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms