RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 TFAP2EQ6VUC0 442 aa17.96■□□□□ 0.47
CLN6-207ENST00000566347 XAGE5Q8WWM1 108 aa17.96■□□□□ 0.47
CLN6-207ENST00000566347 ZNF524Q96C55 264 aa17.96■□□□□ 0.47
CLN6-207ENST00000566347 NEURL3Q96EH8 262 aa17.96■□□□□ 0.47
CLN6-207ENST00000566347 POM121Q96HA1 1249 aa17.96■□□□□ 0.47
CLN6-207ENST00000566347 PAIP2Q9BPZ3 127 aaKnown RBP17.96■□□□□ 0.47
CLN6-207ENST00000566347 SERINC1Q9NRX5 453 aa17.96■□□□□ 0.47
CLN6-207ENST00000566347 KLHL9Q9P2J3 617 aa17.96■□□□□ 0.47
CLN6-207ENST00000566347 SLC35A3Q9Y2D2 325 aa17.96■□□□□ 0.47
CLN6-207ENST00000566347 WDR45Q9Y484 360 aa17.96■□□□□ 0.47
CLN6-207ENST00000566347 UBTFL6P0CB48 400 aaPredicted RBP17.95■□□□□ 0.46
CLN6-207ENST00000566347 S100A3P33764 101 aa17.95■□□□□ 0.46
CLN6-207ENST00000566347 CHI3L1P36222 383 aaPredicted RBP17.95■□□□□ 0.46
CLN6-207ENST00000566347 CASP9P55211 416 aa17.95■□□□□ 0.46
CLN6-207ENST00000566347 BST1Q10588 318 aa17.95■□□□□ 0.46
CLN6-207ENST00000566347 FAM174BQ3ZCQ3 159 aa17.95■□□□□ 0.46
CLN6-207ENST00000566347 AP1ARQ63HQ0 302 aa17.95■□□□□ 0.46
CLN6-207ENST00000566347 TNFAIP8L2Q6P589 184 aaPredicted RBP17.95■□□□□ 0.46
CLN6-207ENST00000566347 PRSS57Q6UWY2 283 aa17.95■□□□□ 0.46
CLN6-207ENST00000566347 ZNF704Q6ZNC4 412 aaPredicted RBP17.95■□□□□ 0.46
CLN6-207ENST00000566347 NUFIP2Q7Z417 695 aaKnown RBP17.95■□□□□ 0.46
CLN6-207ENST00000566347 WFDC8Q8IUA0 241 aa17.95■□□□□ 0.46
CLN6-207ENST00000566347 GABRG1Q8N1C3 465 aa17.95■□□□□ 0.46
CLN6-207ENST00000566347 ROPN1LQ96C74 230 aa17.95■□□□□ 0.46
CLN6-207ENST00000566347 CCDC115Q96NT0 180 aa17.95■□□□□ 0.46
CLN6-207ENST00000566347 SAP130Q9H0E3 1048 aa17.95■□□□□ 0.46
CLN6-207ENST00000566347 GSX1Q9H4S2 264 aaPredicted RBP17.95■□□□□ 0.46
CLN6-207ENST00000566347 BCO1Q9HAY6 547 aa17.95■□□□□ 0.46
CLN6-207ENST00000566347 PNPOQ9NVS9 261 aa17.95■□□□□ 0.46
CLN6-207ENST00000566347 MARCOQ9UEW3 520 aaPredicted RBP17.95■□□□□ 0.46
CLN6-207ENST00000566347 BTNL2Q9UIR0 455 aa17.95■□□□□ 0.46
CLN6-207ENST00000566347 CENPVL1A0A0U1RR11 272 aa17.94■□□□□ 0.46
CLN6-207ENST00000566347 A0A1W2PNR3 127 aa17.94■□□□□ 0.46
CLN6-207ENST00000566347 GCM2O75603 506 aaPredicted RBP17.94■□□□□ 0.46
CLN6-207ENST00000566347 ENPP1P22413 925 aa17.94■□□□□ 0.46
CLN6-207ENST00000566347 SESN3P58005 492 aa17.94■□□□□ 0.46
CLN6-207ENST00000566347 HPCAP84074 193 aa17.94■□□□□ 0.46
CLN6-207ENST00000566347 P2RY6Q15077 328 aa17.94■□□□□ 0.46
CLN6-207ENST00000566347 TYW3Q6IPR3 259 aaKnown RBP17.94■□□□□ 0.46
CLN6-207ENST00000566347 PLEKHM3Q6ZWE6 761 aa17.94■□□□□ 0.46
CLN6-207ENST00000566347 OLIG3Q7RTU3 272 aa17.94■□□□□ 0.46
CLN6-207ENST00000566347 ZNF619Q8N2I2 560 aa17.94■□□□□ 0.46
CLN6-207ENST00000566347 TRIML2Q8N7C3 387 aa17.94■□□□□ 0.46
CLN6-207ENST00000566347 FAM71CQ8NEG0 241 aa17.94■□□□□ 0.46
CLN6-207ENST00000566347 SLC25A43Q8WUT9 341 aaPredicted RBP17.94■□□□□ 0.46
CLN6-207ENST00000566347 RAB8BQ92930 207 aa17.94■□□□□ 0.46
CLN6-207ENST00000566347 S100PBPQ96BU1 408 aa17.94■□□□□ 0.46
CLN6-207ENST00000566347 PLPPR2Q96GM1 343 aa17.94■□□□□ 0.46
CLN6-207ENST00000566347 OR5B2Q96R09 309 aa17.94■□□□□ 0.46
CLN6-207ENST00000566347 USB1Q9BQ65 265 aaKnown RBP17.94■□□□□ 0.46
CLN6-207ENST00000566347 SLC35A5Q9BS91 424 aa17.94■□□□□ 0.46
CLN6-207ENST00000566347 ACER3Q9NUN7 267 aa17.94■□□□□ 0.46
CLN6-207ENST00000566347 SPIN1Q9Y657 262 aaPredicted RBP17.94■□□□□ 0.46
CLN6-207ENST00000566347 FREM1Q5H8C1 2179 aa17.94■□□□□ 0.46
CLN6-207ENST00000566347 H6PDO95479 791 aa17.93■□□□□ 0.46
CLN6-207ENST00000566347 INHBBP09529 407 aa17.93■□□□□ 0.46
CLN6-207ENST00000566347 IL32P24001 234 aa17.93■□□□□ 0.46
CLN6-207ENST00000566347 ADSLP30566 484 aaPredicted RBP17.93■□□□□ 0.46
CLN6-207ENST00000566347 PGM1P36871 562 aa17.93■□□□□ 0.46
CLN6-207ENST00000566347 TXNL4AP83876 142 aaKnown RBP17.93■□□□□ 0.46
CLN6-207ENST00000566347 LRRC74AQ0VAA2 488 aa17.93■□□□□ 0.46
CLN6-207ENST00000566347 MERTKQ12866 999 aa17.93■□□□□ 0.46
CLN6-207ENST00000566347 MAPK14Q16539 360 aa17.93■□□□□ 0.46
CLN6-207ENST00000566347 SFRP5Q5T4F7 317 aa17.93■□□□□ 0.46
CLN6-207ENST00000566347 FRRS1Q6ZNA5 592 aa17.93■□□□□ 0.46
CLN6-207ENST00000566347 SPATA19Q7Z5L4 167 aa17.93■□□□□ 0.46
CLN6-207ENST00000566347 ANKRD42Q8N9B4 389 aa17.93■□□□□ 0.46
CLN6-207ENST00000566347 PSD2Q9BQI7 771 aa17.93■□□□□ 0.46
CLN6-207ENST00000566347 QRSL1Q9H0R6 528 aaKnown RBP17.93■□□□□ 0.46
CLN6-207ENST00000566347 NGBQ9NPG2 151 aa17.93■□□□□ 0.46
CLN6-207ENST00000566347 AIG1Q9NVV5 245 aa17.93■□□□□ 0.46
CLN6-207ENST00000566347 NAV3Q8IVL0 2385 aa17.93■□□□□ 0.46
CLN6-207ENST00000566347 IGHV3-15A0A0B4J1V0 119 aa17.92■□□□□ 0.46
CLN6-207ENST00000566347 TRPC5OSA6NMA1 111 aa17.92■□□□□ 0.46
CLN6-207ENST00000566347 SDHDO14521 159 aa17.92■□□□□ 0.46
CLN6-207ENST00000566347 CYTIPO60759 359 aa17.92■□□□□ 0.46
CLN6-207ENST00000566347 TMCC2O75069 709 aa17.92■□□□□ 0.46
CLN6-207ENST00000566347 ALDOCP09972 364 aaKnown RBP17.92■□□□□ 0.46
CLN6-207ENST00000566347 APOBEC1P41238 236 aaKnown RBP17.92■□□□□ 0.46
CLN6-207ENST00000566347 ANXA11P50995 505 aaKnown RBP17.92■□□□□ 0.46
CLN6-207ENST00000566347 CSNK2A1P68400 391 aaPredicted RBP17.92■□□□□ 0.46
CLN6-207ENST00000566347 RASGEF1BQ0VAM2 473 aa17.92■□□□□ 0.46
CLN6-207ENST00000566347 FUT5Q11128 374 aa17.92■□□□□ 0.46
CLN6-207ENST00000566347 GPAT3Q53EU6 434 aa17.92■□□□□ 0.46
CLN6-207ENST00000566347 SYT14P1Q58G82 188 aa17.92■□□□□ 0.46
CLN6-207ENST00000566347 ZNF563Q8TA94 476 aa17.92■□□□□ 0.46
CLN6-207ENST00000566347 HSD17B8Q92506 261 aa17.92■□□□□ 0.46
CLN6-207ENST00000566347 KISS1RQ969F8 398 aaPredicted RBP17.92■□□□□ 0.46
CLN6-207ENST00000566347 PANX1Q96RD7 426 aa17.92■□□□□ 0.46
CLN6-207ENST00000566347 ZBTB18Q99592 522 aa17.92■□□□□ 0.46
CLN6-207ENST00000566347 TMEM204Q9BSN7 226 aa17.92■□□□□ 0.46
CLN6-207ENST00000566347 GSX2Q9BZM3 304 aa17.92■□□□□ 0.46
CLN6-207ENST00000566347 EXOSC3Q9NQT5 275 aaKnown RBP17.92■□□□□ 0.46
CLN6-207ENST00000566347 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.92■□□□□ 0.46
CLN6-207ENST00000566347 THAP1Q9NVV9 213 aa17.92■□□□□ 0.46
CLN6-207ENST00000566347 PRR14LQ5THK1 2151 aa17.91■□□□□ 0.46
CLN6-207ENST00000566347 ZNF724A8MTY0 619 aa17.91■□□□□ 0.46
CLN6-207ENST00000566347 FAM171A2A8MVW0 826 aa17.91■□□□□ 0.46
CLN6-207ENST00000566347 SMAD9O15198 467 aaKnown RBP17.91■□□□□ 0.46
CLN6-207ENST00000566347 HDAC3O15379 428 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms