RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 SLC1A3P43003 542 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 ERVPABLB-1P60509 514 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 RING1Q06587 406 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 GK2Q14410 553 aaPredicted RBP2.73□□□□□ -1.97
CHD9-218ENST00000566029 THEM4Q5T1C6 240 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 ACSM2BQ68CK6 577 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 SMARCD3Q6STE5 483 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 ETV3LQ6ZN32 361 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 NRSN1Q8IZ57 195 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 RGL4Q8IZJ4 473 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 C15orf54Q8N8G6 183 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 PNPLA1Q8N8W4 532 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 DBF4BQ8NFT6 615 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 OR2D3Q8NGH3 330 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 OR10A6Q8NH74 314 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 ADAMTS15Q8TE58 950 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 BMFQ96LC9 184 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 IL4I1Q96RQ9 567 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 IFT27Q9BW83 186 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 POLDIP3Q9BY77 421 aaKnown RBP2.73□□□□□ -1.97
CHD9-218ENST00000566029 BTBD1Q9H0C5 482 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 RASL12Q9NYN1 266 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 GALPQ9UBC7 116 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 TRPV2Q9Y5S1 764 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 LRP5LA4QPB2 252 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 PPP1R2P9O14990 202 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 CHST10O43529 356 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 OR1I1O60431 355 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 CRYBA1P05813 215 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 SFTPBP07988 381 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 ZNF865P0CJ78 1059 aaPredicted RBP2.73□□□□□ -1.97
CHD9-218ENST00000566029 LIMS3P0CW19 117 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 LIMS4P0CW20 117 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 ELNP15502 786 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 TACR1P25103 407 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 SERPINF1P36955 418 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 WDR5P61964 334 aaKnown RBP2.73□□□□□ -1.97
CHD9-218ENST00000566029 ACY1Q03154 408 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 MTAPQ13126 283 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 NDUFAF6Q330K2 333 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 LINGO4Q6UY18 593 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 SP8Q8IXZ3 490 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 PRSS58Q8IYP2 241 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 OR9K2Q8NGE7 335 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 OR5M3Q8NGP4 307 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 PXYLP1Q8TE99 480 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 GLYATL2Q8WU03 294 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 TMEM159Q96B96 161 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 MRPL38Q96DV4 380 aaKnown RBP2.73□□□□□ -1.97
CHD9-218ENST00000566029 PTCHD1Q96NR3 888 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 NIPSNAP1Q9BPW8 284 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 MAN2C1Q9NTJ4 1040 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 PPP4R1LQ9P1A2 415 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 PTGFRNQ9P2B2 879 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 LAMP5Q9UJQ1 280 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 ADAMTS5Q9UNA0 930 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 A0A1B0GUH1 482 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 A0A1W2PRB8 838 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 OR14I1A6ND48 311 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 RBBP9O75884 186 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 RECKO95980 971 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 NDUFB7P17568 137 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 S100A3P33764 101 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 IHHQ14623 411 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 EOGTQ5NDL2 527 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 MANEAQ5SRI9 462 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 YOD1Q5VVQ6 348 aaPredicted RBP2.73□□□□□ -1.97
CHD9-218ENST00000566029 PRICKLE2Q7Z3G6 844 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 SZRD1Q7Z422 152 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 NRROSQ86YC3 692 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 CRYBG2Q8N1P7 616 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 ZNF485Q8NCK3 441 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 DNAJB3Q8WWF6 145 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 C1GALT1C1Q96EU7 318 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 KCTD7Q96MP8 289 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 CDCP1Q9H5V8 836 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 GPR34Q9UPC5 381 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 FAM230AA0A1W2PPH8 454 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 UBE2CO00762 179 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 FGF10O15520 208 aaPredicted RBP2.73□□□□□ -1.97
CHD9-218ENST00000566029 GGCTO75223 188 aaKnown RBP2.73□□□□□ -1.97
CHD9-218ENST00000566029 UQCRC2P22695 453 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 LAP3P28838 519 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 GCGRP47871 477 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 SRSF4Q08170 494 aaKnown RBP2.73□□□□□ -1.97
CHD9-218ENST00000566029 KLF9Q13886 244 aaPredicted RBP2.73□□□□□ -1.97
CHD9-218ENST00000566029 PEA15Q15121 130 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 ZNHIT3Q15649 155 aaPredicted RBP2.73□□□□□ -1.97
CHD9-218ENST00000566029 AKR1C8PQ5T2L2 129 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 ATXN7L2Q5T6C5 722 aaPredicted RBP2.73□□□□□ -1.97
CHD9-218ENST00000566029 NPSR1Q6W5P4 371 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 DCUN1D3Q8IWE4 304 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 LRRC52Q8N7C0 313 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 C19orf47Q8N9M1 422 aaKnown RBP2.73□□□□□ -1.97
CHD9-218ENST00000566029 CD200R1Q8TD46 325 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 CLEC4CQ8WTT0 213 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 SAT2Q96F10 170 aaPredicted RBP2.73□□□□□ -1.97
CHD9-218ENST00000566029 LINGO1Q96FE5 620 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 C12orf66Q96MD2 445 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 ERMAPQ96PL5 475 aaPredicted RBP2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms