RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 NPTX1Q15818 432 aa7.07□□□□□ -1.28
CDH1-208ENST00000565810 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.07□□□□□ -1.28
CDH1-208ENST00000565810 ALG10BQ5I7T1 473 aa7.07□□□□□ -1.28
CDH1-208ENST00000565810 SWT1Q5T5J6 900 aaKnown RBP7.07□□□□□ -1.28
CDH1-208ENST00000565810 RAET1LQ5VY80 246 aa7.07□□□□□ -1.28
CDH1-208ENST00000565810 FAM180AQ6UWF9 173 aa7.07□□□□□ -1.28
CDH1-208ENST00000565810 ARSKQ6UWY0 536 aa7.07□□□□□ -1.28
CDH1-208ENST00000565810 RRM2BQ7LG56 351 aa7.07□□□□□ -1.28
CDH1-208ENST00000565810 YRDCQ86U90 279 aaKnown RBP7.07□□□□□ -1.28
CDH1-208ENST00000565810 COMTD1Q86VU5 262 aa7.07□□□□□ -1.28
CDH1-208ENST00000565810 FAM109AQ8N4B1 249 aa7.07□□□□□ -1.28
CDH1-208ENST00000565810 PAPD5Q8NDF8 572 aaKnown RBP7.07□□□□□ -1.28
CDH1-208ENST00000565810 FAM83FQ8NEG4 500 aaPredicted RBP7.07□□□□□ -1.28
CDH1-208ENST00000565810 ADAMTS16Q8TE57 1224 aa7.07□□□□□ -1.28
CDH1-208ENST00000565810 PYDC1Q8WXC3 89 aa7.07□□□□□ -1.28
CDH1-208ENST00000565810 SLC41A3Q96GZ6 507 aa7.07□□□□□ -1.28
CDH1-208ENST00000565810 C7orf34Q96L11 122 aa7.07□□□□□ -1.28
CDH1-208ENST00000565810 UBL7Q96S82 380 aaPredicted RBP7.07□□□□□ -1.28
CDH1-208ENST00000565810 PIP5K1AQ99755 562 aa7.07□□□□□ -1.28
CDH1-208ENST00000565810 WFDC6Q9BQY6 131 aa7.07□□□□□ -1.28
CDH1-208ENST00000565810 BDH2Q9BUT1 245 aa7.07□□□□□ -1.28
CDH1-208ENST00000565810 PRR14Q9BWN1 585 aa7.07□□□□□ -1.28
CDH1-208ENST00000565810 RSPO3Q9BXY4 272 aaPredicted RBP7.07□□□□□ -1.28
CDH1-208ENST00000565810 OR2B2Q9GZK3 357 aa7.07□□□□□ -1.28
CDH1-208ENST00000565810 UBQLN3Q9H347 655 aa7.07□□□□□ -1.28
CDH1-208ENST00000565810 EXO5Q9H790 373 aa7.07□□□□□ -1.28
CDH1-208ENST00000565810 ZNF703Q9H7S9 590 aaPredicted RBP7.07□□□□□ -1.28
CDH1-208ENST00000565810 REEP1Q9H902 201 aa7.07□□□□□ -1.28
CDH1-208ENST00000565810 C12orf10Q9HB07 376 aa7.07□□□□□ -1.28
CDH1-208ENST00000565810 S100A14Q9HCY8 104 aa7.07□□□□□ -1.28
CDH1-208ENST00000565810 CTPS2Q9NRF8 586 aa7.07□□□□□ -1.28
CDH1-208ENST00000565810 ARMC1Q9NVT9 282 aa7.07□□□□□ -1.28
CDH1-208ENST00000565810 RIMS3Q9UJD0 308 aa7.07□□□□□ -1.28
CDH1-208ENST00000565810 TMCC3Q9ULS5 477 aa7.07□□□□□ -1.28
CDH1-208ENST00000565810 LHX6Q9UPM6 363 aa7.07□□□□□ -1.28
CDH1-208ENST00000565810 RPH3AQ9Y2J0 694 aaPredicted RBP7.07□□□□□ -1.28
CDH1-208ENST00000565810 SPIN1Q9Y657 262 aaPredicted RBP7.07□□□□□ -1.28
CDH1-208ENST00000565810 TMED7-TICAM2A0A0A6YYA0 188 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 A0A0B4J2E0 115 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 A0A1B0GX12 115 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 ELOA3DA6NLF2 546 aaPredicted RBP7.06□□□□□ -1.28
CDH1-208ENST00000565810 GJE1A6NN92 205 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 J3KTA2 159 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 TNFRSF11BO00300 401 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 CHP2O43745 196 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 ZIC3O60481 467 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 ADAM11O75078 769 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 E2F6O75461 281 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 DIRAS1O95057 198 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 GADD45GO95257 159 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 BAG2O95816 211 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 LDLRP01130 860 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 MT-ND1P03886 318 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 H1F0P07305 194 aaKnown RBP7.06□□□□□ -1.28
CDH1-208ENST00000565810 RFPL3SP0C7P2 107 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 ZNF17P17021 662 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 PRKCAP17252 672 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 TCEA1P23193 301 aaKnown RBP7.06□□□□□ -1.28
CDH1-208ENST00000565810 HTR2AP28223 471 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 TACR3P29371 465 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 RRM2P31350 389 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 MAGEA5P43359 124 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 CDH12P55289 794 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 DLX5P56178 289 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 PMP22Q01453 160 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 FOXF1Q12946 379 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 FOXD4Q12950 439 aaPredicted RBP7.06□□□□□ -1.28
CDH1-208ENST00000565810 LY6DQ14210 128 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 GK3PQ14409 553 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 TRAM2Q15035 370 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 TOMM34Q15785 309 aaPredicted RBP7.06□□□□□ -1.28
CDH1-208ENST00000565810 PLPPR5Q32ZL2 321 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 ELOA3BQ3SY89 546 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 SLC25A53Q5H9E4 307 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 COLEC12Q5KU26 742 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 DCST1Q5T197 706 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 OR2T5Q6IEZ7 315 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 POMZP3Q6PJE2 187 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 GDF7Q7Z4P5 450 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 OFCC1Q8IZS5 231 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 GTPBP8Q8N3Z3 284 aaPredicted RBP7.06□□□□□ -1.28
CDH1-208ENST00000565810 PIK3C3Q8NEB9 887 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 ELOA3Q8NG57 546 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 OR2T29Q8NH02 315 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 PHF10Q8WUB8 498 aaKnown RBP7.06□□□□□ -1.28
CDH1-208ENST00000565810 SLC38A4Q969I6 547 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 SLCO4A1Q96BD0 722 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 C3orf49Q96BT1 292 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 MPP4Q96JB8 637 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 HS6ST2Q96MM7 605 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 SFXN2Q96NB2 322 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 ADAM19Q9H013 955 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 DEFB127Q9H1M4 99 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 NMNAT1Q9HAN9 279 aaPredicted RBP7.06□□□□□ -1.28
CDH1-208ENST00000565810 ACKR4Q9NPB9 350 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 KRCC1Q9NPI7 259 aaPredicted RBP7.06□□□□□ -1.28
CDH1-208ENST00000565810 AGPAT4Q9NRZ5 378 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 LUZP4Q9P127 313 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 DNAJB9Q9UBS3 223 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 OSGIN1Q9UJX0 560 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms