RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 CYBRD1Q53TN4 286 aa23.49■■□□□ 1.35
NME3-208ENST00000565379 MTX3Q5HYI7 312 aa23.49■■□□□ 1.35
NME3-208ENST00000565379 CBLL1Q75N03 491 aa23.49■■□□□ 1.35
NME3-208ENST00000565379 FGD2Q7Z6J4 655 aa23.49■■□□□ 1.35
NME3-208ENST00000565379 GHDCQ8N2G8 530 aa23.49■■□□□ 1.35
NME3-208ENST00000565379 ITLN2Q8WWU7 325 aaPredicted RBP23.49■■□□□ 1.35
NME3-208ENST00000565379 ST8SIA1Q92185 356 aa23.49■■□□□ 1.35
NME3-208ENST00000565379 ASB9Q96DX5 294 aa23.49■■□□□ 1.35
NME3-208ENST00000565379 PIGQQ9BRB3 760 aa23.49■■□□□ 1.35
NME3-208ENST00000565379 DEFB127Q9H1M4 99 aa23.49■■□□□ 1.35
NME3-208ENST00000565379 LDAHQ9H6V9 325 aa23.49■■□□□ 1.35
NME3-208ENST00000565379 ACTR3BQ9P1U1 418 aa23.49■■□□□ 1.35
NME3-208ENST00000565379 SAMD4AQ9UPU9 718 aaKnown RBP23.49■■□□□ 1.35
NME3-208ENST00000565379 SLC9A8Q9Y2E8 581 aa23.49■■□□□ 1.35
NME3-208ENST00000565379 GTF3C1Q12789 2109 aa23.48■■□□□ 1.35
NME3-208ENST00000565379 TRGV5A0A0B4J1U4 118 aa23.48■■□□□ 1.35
NME3-208ENST00000565379 ZIC3O60481 467 aa23.48■■□□□ 1.35
NME3-208ENST00000565379 TPST1O60507 370 aa23.48■■□□□ 1.35
NME3-208ENST00000565379 FESP07332 822 aa23.48■■□□□ 1.35
NME3-208ENST00000565379 ZNF17P17021 662 aa23.48■■□□□ 1.35
NME3-208ENST00000565379 ADH6P28332 368 aa23.48■■□□□ 1.35
NME3-208ENST00000565379 GRNP28799 593 aaKnown RBP23.48■■□□□ 1.35
NME3-208ENST00000565379 NCALDP61601 193 aa23.48■■□□□ 1.35
NME3-208ENST00000565379 COPZ1P61923 177 aa23.48■■□□□ 1.35
NME3-208ENST00000565379 PLAURQ03405 335 aa23.48■■□□□ 1.35
NME3-208ENST00000565379 TRAP1Q12931 704 aaKnown RBP23.48■■□□□ 1.35
NME3-208ENST00000565379 PGM2L1Q6PCE3 622 aa23.48■■□□□ 1.35
NME3-208ENST00000565379 NSMCE2Q96MF7 247 aa23.48■■□□□ 1.35
NME3-208ENST00000565379 CADM1Q9BY67 442 aaKnown RBP23.48■■□□□ 1.35
NME3-208ENST00000565379 ETV2O00321 342 aaPredicted RBP23.47■■□□□ 1.35
NME3-208ENST00000565379 ARPC2O15144 300 aa23.47■■□□□ 1.35
NME3-208ENST00000565379 BCAS1O75363 584 aaPredicted RBP23.47■■□□□ 1.35
NME3-208ENST00000565379 PDE5AO76074 875 aa23.47■■□□□ 1.35
NME3-208ENST00000565379 SERPINA1P01009 418 aa23.47■■□□□ 1.35
NME3-208ENST00000565379 NCK1P16333 377 aa23.47■■□□□ 1.35
NME3-208ENST00000565379 DLX5P56178 289 aa23.47■■□□□ 1.35
NME3-208ENST00000565379 QPRTQ15274 297 aa23.47■■□□□ 1.35
NME3-208ENST00000565379 PLPPR5Q32ZL2 321 aa23.47■■□□□ 1.35
NME3-208ENST00000565379 SLC25A53Q5H9E4 307 aa23.47■■□□□ 1.35
NME3-208ENST00000565379 ARHGAP11AQ6P4F7 1023 aa23.47■■□□□ 1.35
NME3-208ENST00000565379 AAGABQ6PD74 315 aa23.47■■□□□ 1.35
NME3-208ENST00000565379 TRILQ7L0X0 811 aa23.47■■□□□ 1.35
NME3-208ENST00000565379 GPR32P1Q8NGA4 272 aa23.47■■□□□ 1.35
NME3-208ENST00000565379 ZNF563Q8TA94 476 aa23.47■■□□□ 1.35
NME3-208ENST00000565379 NEIL3Q8TAT5 605 aa23.47■■□□□ 1.35
NME3-208ENST00000565379 MRGPRX4Q96LA9 322 aa23.47■■□□□ 1.35
NME3-208ENST00000565379 ARHGDIGQ99819 225 aa23.47■■□□□ 1.35
NME3-208ENST00000565379 EXO5Q9H790 373 aa23.47■■□□□ 1.35
NME3-208ENST00000565379 DCAF13Q9NV06 445 aaKnown RBP23.47■■□□□ 1.35
NME3-208ENST00000565379 TESQ9UGI8 421 aaKnown RBP23.47■■□□□ 1.35
NME3-208ENST00000565379 ZNF835Q9Y2P0 537 aa23.47■■□□□ 1.35
NME3-208ENST00000565379 TNFSF12-TNFSF13A0A0A6YY99 330 aa23.46■■□□□ 1.35
NME3-208ENST00000565379 OR14I1A6ND48 311 aa23.46■■□□□ 1.35
NME3-208ENST00000565379 AQP7O14520 342 aa23.46■■□□□ 1.35
NME3-208ENST00000565379 HNRNPRO43390 633 aaKnown RBP23.46■■□□□ 1.35
NME3-208ENST00000565379 GMFGO60234 142 aa23.46■■□□□ 1.35
NME3-208ENST00000565379 FMO6PO60774 539 aa23.46■■□□□ 1.35
NME3-208ENST00000565379 CELA3AP09093 270 aa23.46■■□□□ 1.35
NME3-208ENST00000565379 CHMP24386 653 aa23.46■■□□□ 1.35
NME3-208ENST00000565379 HTR3AP46098 478 aa23.46■■□□□ 1.35
NME3-208ENST00000565379 RGS8P57771 180 aaPredicted RBP23.46■■□□□ 1.35
NME3-208ENST00000565379 ADORA2A-AS1P86434 159 aa23.46■■□□□ 1.35
NME3-208ENST00000565379 NRF1Q16656 503 aa23.46■■□□□ 1.35
NME3-208ENST00000565379 NHSL2Q5HYW2 709 aa23.46■■□□□ 1.35
NME3-208ENST00000565379 ARSKQ6UWY0 536 aa23.46■■□□□ 1.35
NME3-208ENST00000565379 ASRGL1Q7L266 308 aa23.46■■□□□ 1.35
NME3-208ENST00000565379 RANBP3LQ86VV4 465 aaPredicted RBP23.46■■□□□ 1.35
NME3-208ENST00000565379 DHFR2Q86XF0 187 aa23.46■■□□□ 1.35
NME3-208ENST00000565379 ULK2Q8IYT8 1036 aa23.46■■□□□ 1.35
NME3-208ENST00000565379 GTPBP8Q8N3Z3 284 aaPredicted RBP23.46■■□□□ 1.35
NME3-208ENST00000565379 PCDHAC1Q9H158 963 aa23.46■■□□□ 1.35
NME3-208ENST00000565379 STOML1Q9UBI4 398 aa23.46■■□□□ 1.35
NME3-208ENST00000565379 VDAC3Q9Y277 283 aa23.46■■□□□ 1.35
NME3-208ENST00000565379 CDC40O60508 579 aaKnown RBP eCLIP23.45■■□□□ 1.34
NME3-208ENST00000565379 EPPINO95925 133 aa23.45■■□□□ 1.34
NME3-208ENST00000565379 ACTL6AO96019 429 aa23.45■■□□□ 1.34
NME3-208ENST00000565379 RYKP34925 604 aa23.45■■□□□ 1.34
NME3-208ENST00000565379 ACAA2P42765 397 aaKnown RBP23.45■■□□□ 1.34
NME3-208ENST00000565379 RBPJQ06330 500 aa23.45■■□□□ 1.34
NME3-208ENST00000565379 CDSNQ15517 529 aa23.45■■□□□ 1.34
NME3-208ENST00000565379 TMEM44Q2T9K0 475 aa23.45■■□□□ 1.34
NME3-208ENST00000565379 GLIPR1L2Q4G1C9 344 aa23.45■■□□□ 1.34
NME3-208ENST00000565379 WIPI1Q5MNZ9 446 aaPredicted RBP23.45■■□□□ 1.34
NME3-208ENST00000565379 SP5Q6BEB4 398 aaPredicted RBP23.45■■□□□ 1.34
NME3-208ENST00000565379 C3P1Q6ZMU1 363 aa23.45■■□□□ 1.34
NME3-208ENST00000565379 YRDCQ86U90 279 aaKnown RBP23.45■■□□□ 1.34
NME3-208ENST00000565379 SPPL2CQ8IUH8 684 aa23.45■■□□□ 1.34
NME3-208ENST00000565379 TPD52L3Q96J77 140 aa23.45■■□□□ 1.34
NME3-208ENST00000565379 CLPTM1LQ96KA5 538 aa23.45■■□□□ 1.34
NME3-208ENST00000565379 RSPO3Q9BXY4 272 aaPredicted RBP23.45■■□□□ 1.34
NME3-208ENST00000565379 TRIM15Q9C019 465 aa23.45■■□□□ 1.34
NME3-208ENST00000565379 ACER3Q9NUN7 267 aa23.45■■□□□ 1.34
NME3-208ENST00000565379 ZNF407Q9C0G0 2248 aa23.44■■□□□ 1.34
NME3-208ENST00000565379 PRSS44E7EML9 344 aa23.44■■□□□ 1.34
NME3-208ENST00000565379 ZNF682O95780 498 aa23.44■■□□□ 1.34
NME3-208ENST00000565379 GKN3PP0CG01 181 aa23.44■■□□□ 1.34
NME3-208ENST00000565379 PRKCAP17252 672 aa23.44■■□□□ 1.34
NME3-208ENST00000565379 ELK4P28324 431 aa23.44■■□□□ 1.34
NME3-208ENST00000565379 MSX2P35548 267 aaPredicted RBP23.44■■□□□ 1.34
NME3-208ENST00000565379 IDH2P48735 452 aaKnown RBP23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms