RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 GOLGA8QA0A0J9YX86 632 aa7.59□□□□□ -1.19
CAPN3-213ENST00000565173 GOLGA8OA6NCC3 632 aa7.59□□□□□ -1.19
CAPN3-213ENST00000565173 ZNF724A8MTY0 619 aa7.59□□□□□ -1.19
CAPN3-213ENST00000565173 SHISA9B4DS77 424 aa7.59□□□□□ -1.19
CAPN3-213ENST00000565173 RNF223E7ERA6 249 aa7.59□□□□□ -1.19
CAPN3-213ENST00000565173 GOLGA8NF8WBI6 632 aa7.59□□□□□ -1.19
CAPN3-213ENST00000565173 CLOCKO15516 846 aa7.59□□□□□ -1.19
CAPN3-213ENST00000565173 RAMP1O60894 148 aa7.59□□□□□ -1.19
CAPN3-213ENST00000565173 NDUFS7O75251 213 aa7.59□□□□□ -1.19
CAPN3-213ENST00000565173 BCAS1O75363 584 aaPredicted RBP7.59□□□□□ -1.19
CAPN3-213ENST00000565173 UGT2B17O75795 530 aa7.59□□□□□ -1.19
CAPN3-213ENST00000565173 LYZL6O75951 148 aa7.59□□□□□ -1.19
CAPN3-213ENST00000565173 PGM3O95394 542 aa7.59□□□□□ -1.19
CAPN3-213ENST00000565173 NUDT17P0C025 328 aa7.59□□□□□ -1.19
CAPN3-213ENST00000565173 G6PDP11413 515 aa7.59□□□□□ -1.19
CAPN3-213ENST00000565173 UBL4AP11441 157 aa7.59□□□□□ -1.19
CAPN3-213ENST00000565173 COX5AP20674 150 aa7.59□□□□□ -1.19
CAPN3-213ENST00000565173 MATN1P21941 496 aa7.59□□□□□ -1.19
CAPN3-213ENST00000565173 IGHV1-2P23083 117 aa7.59□□□□□ -1.19
CAPN3-213ENST00000565173 NTF4P34130 210 aa7.59□□□□□ -1.19
CAPN3-213ENST00000565173 SERPINB5P36952 375 aa7.59□□□□□ -1.19
CAPN3-213ENST00000565173 CDKN1AP38936 164 aa7.59□□□□□ -1.19
CAPN3-213ENST00000565173 CLDN8P56748 225 aa7.59□□□□□ -1.19
CAPN3-213ENST00000565173 SESN3P58005 492 aa7.59□□□□□ -1.19
CAPN3-213ENST00000565173 EMX2Q04743 252 aa7.59□□□□□ -1.19
CAPN3-213ENST00000565173 RASGEF1BQ0VAM2 473 aa7.59□□□□□ -1.19
CAPN3-213ENST00000565173 SELENBP1Q13228 472 aa7.59□□□□□ -1.19
CAPN3-213ENST00000565173 CBFBQ13951 182 aa7.59□□□□□ -1.19
CAPN3-213ENST00000565173 ETFDHQ16134 617 aa7.59□□□□□ -1.19
CAPN3-213ENST00000565173 MAPK14Q16539 360 aa7.59□□□□□ -1.19
CAPN3-213ENST00000565173 ARHGAP11BQ3KRB8 267 aa7.59□□□□□ -1.19
CAPN3-213ENST00000565173 SPDYE7PQ495Y7 208 aa7.59□□□□□ -1.19
CAPN3-213ENST00000565173 TIGD2Q4W5G0 525 aa7.59□□□□□ -1.19
CAPN3-213ENST00000565173 HEPHL1Q6MZM0 1159 aa7.59□□□□□ -1.19
CAPN3-213ENST00000565173 BHLHA15Q7RTS1 189 aaPredicted RBP7.59□□□□□ -1.19
CAPN3-213ENST00000565173 C6orf120Q7Z4R8 191 aa7.59□□□□□ -1.19
CAPN3-213ENST00000565173 CLECL1Q8IZS7 167 aa7.59□□□□□ -1.19
CAPN3-213ENST00000565173 FNDC5Q8NAU1 212 aa7.59□□□□□ -1.19
CAPN3-213ENST00000565173 FAM71CQ8NEG0 241 aa7.59□□□□□ -1.19
CAPN3-213ENST00000565173 KBTBD8Q8NFY9 601 aa7.59□□□□□ -1.19
CAPN3-213ENST00000565173 RFWD2Q8NHY2 731 aa7.59□□□□□ -1.19
CAPN3-213ENST00000565173 MOAP1Q96BY2 351 aa7.59□□□□□ -1.19
CAPN3-213ENST00000565173 ZG16BQ96DA0 208 aa7.59□□□□□ -1.19
CAPN3-213ENST00000565173 ZNF300Q96RE9 604 aaPredicted RBP7.59□□□□□ -1.19
CAPN3-213ENST00000565173 PRPF18Q99633 342 aaKnown RBP7.59□□□□□ -1.19
CAPN3-213ENST00000565173 USB1Q9BQ65 265 aaKnown RBP7.59□□□□□ -1.19
CAPN3-213ENST00000565173 THUMPD3Q9BV44 507 aaKnown RBP7.59□□□□□ -1.19
CAPN3-213ENST00000565173 DUSP26Q9BV47 211 aa7.59□□□□□ -1.19
CAPN3-213ENST00000565173 PARD6BQ9BYG5 372 aa7.59□□□□□ -1.19
CAPN3-213ENST00000565173 POTEKPQ9BYX7 375 aa7.59□□□□□ -1.19
CAPN3-213ENST00000565173 REG4Q9BYZ8 158 aa7.59□□□□□ -1.19
CAPN3-213ENST00000565173 LAT2Q9GZY6 243 aa7.59□□□□□ -1.19
CAPN3-213ENST00000565173 SLCO5A1Q9H2Y9 848 aa7.59□□□□□ -1.19
CAPN3-213ENST00000565173 NGBQ9NPG2 151 aa7.59□□□□□ -1.19
CAPN3-213ENST00000565173 NPAP1Q9NZP6 1156 aa7.59□□□□□ -1.19
CAPN3-213ENST00000565173 LIPT1Q9Y234 373 aa7.59□□□□□ -1.19
CAPN3-213ENST00000565173 SONP18583 2426 aaKnown RBP7.59□□□□□ -1.19
CAPN3-213ENST00000565173 CADP27708 2225 aa7.58□□□□□ -1.2
CAPN3-213ENST00000565173 STAB1Q9NY15 2570 aa7.58□□□□□ -1.2
CAPN3-213ENST00000565173 IGKV3D-15A0A087WSY6 115 aa7.58□□□□□ -1.2
CAPN3-213ENST00000565173 ZNF716A6NP11 495 aa7.58□□□□□ -1.2
CAPN3-213ENST00000565173 CFLARO15519 480 aa7.58□□□□□ -1.2
CAPN3-213ENST00000565173 ITM2AO43736 263 aa7.58□□□□□ -1.2
CAPN3-213ENST00000565173 TYROBPO43914 113 aa7.58□□□□□ -1.2
CAPN3-213ENST00000565173 SCN2BO60939 215 aa7.58□□□□□ -1.2
CAPN3-213ENST00000565173 SKAP2O75563 359 aaPredicted RBP7.58□□□□□ -1.2
CAPN3-213ENST00000565173 IGHV4-39P01824 125 aa7.58□□□□□ -1.2
CAPN3-213ENST00000565173 BPGMP07738 259 aa7.58□□□□□ -1.2
CAPN3-213ENST00000565173 GUSBP08236 651 aa7.58□□□□□ -1.2
CAPN3-213ENST00000565173 SLC7A1P30825 629 aa7.58□□□□□ -1.2
CAPN3-213ENST00000565173 IDUAP35475 653 aa7.58□□□□□ -1.2
CAPN3-213ENST00000565173 PGM1P36871 562 aa7.58□□□□□ -1.2
CAPN3-213ENST00000565173 ACVR1BP36896 505 aa7.58□□□□□ -1.2
CAPN3-213ENST00000565173 ETV4P43268 484 aa7.58□□□□□ -1.2
CAPN3-213ENST00000565173 DIO1P49895 249 aa7.58□□□□□ -1.2
CAPN3-213ENST00000565173 CASP9P55211 416 aa7.58□□□□□ -1.2
CAPN3-213ENST00000565173 PHC1P78364 1004 aa7.58□□□□□ -1.2
CAPN3-213ENST00000565173 PLAURQ03405 335 aa7.58□□□□□ -1.2
CAPN3-213ENST00000565173 GPR68Q15743 365 aa7.58□□□□□ -1.2
CAPN3-213ENST00000565173 PGS1Q32NB8 556 aa7.58□□□□□ -1.2
CAPN3-213ENST00000565173 TIMM23BQ5SRD1 257 aa7.58□□□□□ -1.2
CAPN3-213ENST00000565173 OR4F3Q6IEY1 312 aa7.58□□□□□ -1.2
CAPN3-213ENST00000565173 C3orf33Q6P1S2 294 aa7.58□□□□□ -1.2
CAPN3-213ENST00000565173 WDR93Q6P2C0 686 aa7.58□□□□□ -1.2
CAPN3-213ENST00000565173 TMPPEQ6ZT21 453 aa7.58□□□□□ -1.2
CAPN3-213ENST00000565173 CXXC5Q7LFL8 322 aaKnown RBP7.58□□□□□ -1.2
CAPN3-213ENST00000565173 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.58□□□□□ -1.2
CAPN3-213ENST00000565173 DTX2Q86UW9 622 aa7.58□□□□□ -1.2
CAPN3-213ENST00000565173 RIBC1Q8N443 379 aaPredicted RBP7.58□□□□□ -1.2
CAPN3-213ENST00000565173 ZNF433Q8N7K0 673 aaPredicted RBP7.58□□□□□ -1.2
CAPN3-213ENST00000565173 ZNF614Q8N883 585 aa7.58□□□□□ -1.2
CAPN3-213ENST00000565173 TOR1AIP2Q8NFQ8 470 aa7.58□□□□□ -1.2
CAPN3-213ENST00000565173 OR8J2Q8NGG1 315 aa7.58□□□□□ -1.2
CAPN3-213ENST00000565173 MIPOL1Q8TD10 442 aa7.58□□□□□ -1.2
CAPN3-213ENST00000565173 ST8SIA1Q92185 356 aa7.58□□□□□ -1.2
CAPN3-213ENST00000565173 TRMT61AQ96FX7 289 aaKnown RBP7.58□□□□□ -1.2
CAPN3-213ENST00000565173 OR5B2Q96R09 309 aa7.58□□□□□ -1.2
CAPN3-213ENST00000565173 TRAF4Q9BUZ4 470 aaPredicted RBP7.58□□□□□ -1.2
CAPN3-213ENST00000565173 CCDC106Q9BWC9 280 aa7.58□□□□□ -1.2
CAPN3-213ENST00000565173 GRIP2Q9C0E4 1043 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms