RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 OAZ3Q9UMX2 235 aa10.11□□□□□ -0.79
SF3B3-205ENST00000564899 TP53TG5Q9Y2B4 290 aa10.11□□□□□ -0.79
SF3B3-205ENST00000564899 WIF1Q9Y5W5 379 aa10.11□□□□□ -0.79
SF3B3-205ENST00000564899 LYVE1Q9Y5Y7 322 aa10.11□□□□□ -0.79
SF3B3-205ENST00000564899 U3KQV3 271 aa10.11□□□□□ -0.79
SF3B3-205ENST00000564899 ADGRG4Q8IZF6 3080 aa10.1□□□□□ -0.79
SF3B3-205ENST00000564899 ZFHX3Q15911 3703 aa10.1□□□□□ -0.79
SF3B3-205ENST00000564899 C2CD3Q4AC94 2353 aa10.1□□□□□ -0.79
SF3B3-205ENST00000564899 MED13Q9UHV7 2174 aa10.1□□□□□ -0.79
SF3B3-205ENST00000564899 SHANK1Q9Y566 2161 aa10.1□□□□□ -0.79
SF3B3-205ENST00000564899 TRAPPC13A5PLN9 417 aa10.1□□□□□ -0.79
SF3B3-205ENST00000564899 C2orf72A6NCS6 295 aa10.1□□□□□ -0.79
SF3B3-205ENST00000564899 CDK2AP1O14519 115 aa10.1□□□□□ -0.79
SF3B3-205ENST00000564899 GMFGO60234 142 aa10.1□□□□□ -0.79
SF3B3-205ENST00000564899 WDPCPO95876 746 aa10.1□□□□□ -0.79
SF3B3-205ENST00000564899 F10P00742 488 aa10.1□□□□□ -0.79
SF3B3-205ENST00000564899 P04436 131 aa10.1□□□□□ -0.79
SF3B3-205ENST00000564899 LINGO3P0C6S8 592 aa10.1□□□□□ -0.79
SF3B3-205ENST00000564899 CD96P40200 585 aa10.1□□□□□ -0.79
SF3B3-205ENST00000564899 CD97P48960 835 aa10.1□□□□□ -0.79
SF3B3-205ENST00000564899 P2RX1P51575 399 aa10.1□□□□□ -0.79
SF3B3-205ENST00000564899 ARHGDIAP52565 204 aa10.1□□□□□ -0.79
SF3B3-205ENST00000564899 COPZ1P61923 177 aa10.1□□□□□ -0.79
SF3B3-205ENST00000564899 ST3GAL3Q11203 375 aa10.1□□□□□ -0.79
SF3B3-205ENST00000564899 MFAP5Q13361 173 aa10.1□□□□□ -0.79
SF3B3-205ENST00000564899 GK3PQ14409 553 aa10.1□□□□□ -0.79
SF3B3-205ENST00000564899 EXOC3L2Q2M3D2 409 aa10.1□□□□□ -0.79
SF3B3-205ENST00000564899 SLC22A10Q63ZE4 541 aa10.1□□□□□ -0.79
SF3B3-205ENST00000564899 SLC30A6Q6NXT4 461 aa10.1□□□□□ -0.79
SF3B3-205ENST00000564899 ZNF613Q6PF04 617 aa10.1□□□□□ -0.79
SF3B3-205ENST00000564899 SHQ1Q6PI26 577 aaKnown RBP10.1□□□□□ -0.79
SF3B3-205ENST00000564899 TMEM179BQ7Z7N9 219 aa10.1□□□□□ -0.79
SF3B3-205ENST00000564899 HIPK1Q86Z02 1210 aa10.1□□□□□ -0.79
SF3B3-205ENST00000564899 ZDHHC13Q8IUH4 622 aa10.1□□□□□ -0.79
SF3B3-205ENST00000564899 EPHX4Q8IUS5 362 aa10.1□□□□□ -0.79
SF3B3-205ENST00000564899 APLFQ8IW19 511 aaPredicted RBP10.1□□□□□ -0.79
SF3B3-205ENST00000564899 CATSPER1Q8NEC5 780 aa10.1□□□□□ -0.79
SF3B3-205ENST00000564899 TOR1AIP2Q8NFQ8 470 aa10.1□□□□□ -0.79
SF3B3-205ENST00000564899 OR4C15Q8NGM1 316 aa10.1□□□□□ -0.79
SF3B3-205ENST00000564899 OR5W2Q8NH69 310 aa10.1□□□□□ -0.79
SF3B3-205ENST00000564899 OR5K1Q8NHB7 308 aa10.1□□□□□ -0.79
SF3B3-205ENST00000564899 ADAMTS16Q8TE57 1224 aa10.1□□□□□ -0.79
SF3B3-205ENST00000564899 EPYCQ99645 322 aa10.1□□□□□ -0.79
SF3B3-205ENST00000564899 C9orf16Q9BUW7 83 aa10.1□□□□□ -0.79
SF3B3-205ENST00000564899 VCX3BQ9H321 246 aa10.1□□□□□ -0.79
SF3B3-205ENST00000564899 NMNAT1Q9HAN9 279 aaPredicted RBP10.1□□□□□ -0.79
SF3B3-205ENST00000564899 HHATLQ9HCP6 504 aa10.1□□□□□ -0.79
SF3B3-205ENST00000564899 TIMMDC1Q9NPL8 285 aa10.1□□□□□ -0.79
SF3B3-205ENST00000564899 ACER3Q9NUN7 267 aa10.1□□□□□ -0.79
SF3B3-205ENST00000564899 LRFN1Q9P244 771 aa10.1□□□□□ -0.79
SF3B3-205ENST00000564899 RPS6KB2Q9UBS0 482 aa10.1□□□□□ -0.79
SF3B3-205ENST00000564899 TUBD1Q9UJT1 453 aa10.1□□□□□ -0.79
SF3B3-205ENST00000564899 TMCC3Q9ULS5 477 aa10.1□□□□□ -0.79
SF3B3-205ENST00000564899 KCNMB2Q9Y691 235 aa10.1□□□□□ -0.79
SF3B3-205ENST00000564899 TNRC6AQ8NDV7 1962 aaKnown RBP10.09□□□□□ -0.79
SF3B3-205ENST00000564899 IGLV3-32A0A0A0MS00 114 aa10.09□□□□□ -0.79
SF3B3-205ENST00000564899 A0A0B4J2E0 115 aa10.09□□□□□ -0.79
SF3B3-205ENST00000564899 TRBV4-1A0A0J9YWV2 114 aa10.09□□□□□ -0.79
SF3B3-205ENST00000564899 A0A1B0GWA3 101 aa10.09□□□□□ -0.79
SF3B3-205ENST00000564899 A0A1B0GX12 115 aa10.09□□□□□ -0.79
SF3B3-205ENST00000564899 A0A1W2PRQ8 180 aa10.09□□□□□ -0.79
SF3B3-205ENST00000564899 ANKRD33BA6NCL7 494 aa10.09□□□□□ -0.79
SF3B3-205ENST00000564899 G3V2T6 193 aa10.09□□□□□ -0.79
SF3B3-205ENST00000564899 G3V3Y1 287 aa10.09□□□□□ -0.79
SF3B3-205ENST00000564899 PDLIM1O00151 329 aa10.09□□□□□ -0.79
SF3B3-205ENST00000564899 FAAHO00519 579 aa10.09□□□□□ -0.79
SF3B3-205ENST00000564899 NUDT14O95848 222 aa10.09□□□□□ -0.79
SF3B3-205ENST00000564899 PDGFAP04085 211 aa10.09□□□□□ -0.79
SF3B3-205ENST00000564899 THRBP10828 461 aa10.09□□□□□ -0.79
SF3B3-205ENST00000564899 PGCP20142 388 aa10.09□□□□□ -0.79
SF3B3-205ENST00000564899 FUT4P22083 530 aa10.09□□□□□ -0.79
SF3B3-205ENST00000564899 GNLYP22749 145 aa10.09□□□□□ -0.79
SF3B3-205ENST00000564899 ELAVL4P26378 380 aaKnown RBP10.09□□□□□ -0.79
SF3B3-205ENST00000564899 GCKP35557 465 aa10.09□□□□□ -0.79
SF3B3-205ENST00000564899 VHLP40337 213 aa10.09□□□□□ -0.79
SF3B3-205ENST00000564899 LIMS1P48059 325 aa10.09□□□□□ -0.79
SF3B3-205ENST00000564899 IDH2P48735 452 aaKnown RBP10.09□□□□□ -0.79
SF3B3-205ENST00000564899 MASP1P48740 699 aa10.09□□□□□ -0.79
SF3B3-205ENST00000564899 SUMO3P55854 103 aaPredicted RBP10.09□□□□□ -0.79
SF3B3-205ENST00000564899 CBFBQ13951 182 aa10.09□□□□□ -0.79
SF3B3-205ENST00000564899 DGCR6Q14129 220 aa10.09□□□□□ -0.79
SF3B3-205ENST00000564899 LAPTM4AQ15012 233 aa10.09□□□□□ -0.79
SF3B3-205ENST00000564899 TRAM2Q15035 370 aa10.09□□□□□ -0.79
SF3B3-205ENST00000564899 OR1C1Q15619 314 aa10.09□□□□□ -0.79
SF3B3-205ENST00000564899 DCST1Q5T197 706 aa10.09□□□□□ -0.79
SF3B3-205ENST00000564899 OTUD3Q5T2D3 398 aaPredicted RBP10.09□□□□□ -0.79
SF3B3-205ENST00000564899 OR5M10Q6IEU7 315 aa10.09□□□□□ -0.79
SF3B3-205ENST00000564899 ZBTB49Q6ZSB9 765 aa10.09□□□□□ -0.79
SF3B3-205ENST00000564899 GDF7Q7Z4P5 450 aa10.09□□□□□ -0.79
SF3B3-205ENST00000564899 MDGA2Q7Z553 956 aa10.09□□□□□ -0.79
SF3B3-205ENST00000564899 STK32CQ86UX6 486 aa10.09□□□□□ -0.79
SF3B3-205ENST00000564899 ZNF227Q86WZ6 799 aa10.09□□□□□ -0.79
SF3B3-205ENST00000564899 HS3ST5Q8IZT8 346 aa10.09□□□□□ -0.79
SF3B3-205ENST00000564899 CBR4Q8N4T8 237 aa10.09□□□□□ -0.79
SF3B3-205ENST00000564899 LSMEM1Q8N8F7 131 aa10.09□□□□□ -0.79
SF3B3-205ENST00000564899 PSD4Q8NDX1 1056 aa10.09□□□□□ -0.79
SF3B3-205ENST00000564899 FDCSPQ8NFU4 85 aa10.09□□□□□ -0.79
SF3B3-205ENST00000564899 OR4K17Q8NGC6 315 aa10.09□□□□□ -0.79
SF3B3-205ENST00000564899 ZNF563Q8TA94 476 aa10.09□□□□□ -0.79
SF3B3-205ENST00000564899 RNF217Q8TC41 542 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms