RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 PPP1R14AQ96A00 147 aa3.14□□□□□ -1.91
CHD9-213ENST00000564845 RADILQ96JH8 1075 aa3.14□□□□□ -1.91
CHD9-213ENST00000564845 PRRG4Q9BZD6 226 aa3.14□□□□□ -1.91
CHD9-213ENST00000564845 RBM38Q9H0Z9 239 aaKnown RBP3.14□□□□□ -1.91
CHD9-213ENST00000564845 PLEKHJ1Q9NW61 149 aa3.14□□□□□ -1.91
CHD9-213ENST00000564845 TEX51A0A1B0GUA7 166 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 hCG_1807616A0A1W2PRN6 198 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 A6NHS1 94 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 E9PQ18 207 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 H7C417 338 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 KLF8O95600 359 aaPredicted RBP3.13□□□□□ -1.91
CHD9-213ENST00000564845 SAGP10523 405 aaPredicted RBP3.13□□□□□ -1.91
CHD9-213ENST00000564845 PGCP20142 388 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 ABCD3P28288 659 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 GJA4P35212 333 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 SPINT3P49223 89 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 IRF8Q02556 426 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 MPEG1Q2M385 716 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 LRFN4Q6PJG9 635 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 ASPGQ86U10 573 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 IGFN1Q86VF2 1251 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 ZNF454Q8N9F8 522 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 CD300LFQ8TDQ1 290 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 GPBAR1Q8TDU6 330 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 BORCS7Q96B45 105 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 KCTD7Q96MP8 289 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 TBL1XR1Q9BZK7 514 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 ZNF224Q9NZL3 707 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 NPAP1Q9NZP6 1156 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 DNAJB9Q9UBS3 223 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 FXYD1O00168 92 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 TFECO14948 347 aaPredicted RBP3.13□□□□□ -1.91
CHD9-213ENST00000564845 C6orf47O95873 294 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 RPLP1P05386 114 aaKnown RBP3.13□□□□□ -1.91
CHD9-213ENST00000564845 GYPBP06028 91 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 BCKDHAP12694 445 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 RAB6AP20340 208 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 KCNJ5P48544 419 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 ZNF81P51508 661 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 RAB33AQ14088 237 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 GALEQ14376 348 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 AGERQ15109 404 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 RAB11BQ15907 218 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 LIPNQ5VXI9 398 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 LRRC56Q8IYG6 542 aaPredicted RBP3.13□□□□□ -1.91
CHD9-213ENST00000564845 TNFAIP8L1Q8WVP5 186 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 BHLHE41Q9C0J9 482 aaPredicted RBP3.13□□□□□ -1.91
CHD9-213ENST00000564845 LRTM1Q9HBL6 345 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 IL23AQ9NPF7 189 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 GAR1Q9NY12 217 aaKnown RBP3.13□□□□□ -1.91
CHD9-213ENST00000564845 MLXQ9UH92 298 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 FBXL2Q9UKC9 423 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 OR10H1Q9Y4A9 318 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 TCF20Q9UGU0 1960 aaKnown RBP3.13□□□□□ -1.91
CHD9-213ENST00000564845 A0A0G2JPF8 293 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 ANKRD61A6NGH8 418 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 PATE3B3GLJ2 98 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 HNRNPCL3B7ZW38 293 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 SGCEO43556 437 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 SLC22A3O75751 556 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 POP7O75817 140 aaKnown RBP3.13□□□□□ -1.91
CHD9-213ENST00000564845 EBLN1P0CF75 366 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 HNRNPCL4P0DMR1 293 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 DRD3P35462 400 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 HMGCLP35914 325 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 OPRD1P41143 372 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 MANFP55145 182 aaKnown RBP3.13□□□□□ -1.91
CHD9-213ENST00000564845 UBE2MP61081 183 aaKnown RBP3.13□□□□□ -1.91
CHD9-213ENST00000564845 HYAL1Q12794 435 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 MLC1Q15049 377 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 CTU2Q2VPK5 515 aaKnown RBP3.13□□□□□ -1.91
CHD9-213ENST00000564845 TMEM41BQ5BJD5 291 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 ZNF776Q68DI1 518 aaPredicted RBP3.13□□□□□ -1.91
CHD9-213ENST00000564845 CWF19L1Q69YN2 538 aaKnown RBP3.13□□□□□ -1.91
CHD9-213ENST00000564845 Q6ZNB5 142 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 ASCL5Q7RTU5 278 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 P2RY8Q86VZ1 359 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 CPSF7Q8N684 471 aaKnown RBP3.13□□□□□ -1.91
CHD9-213ENST00000564845 STEAP2Q8NFT2 490 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 THAP4Q8WY91 577 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 BOD1Q96IK1 185 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 AKR1E2Q96JD6 320 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 LMLNQ96KR4 655 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 NAA11Q9BSU3 229 aaPredicted RBP3.13□□□□□ -1.91
CHD9-213ENST00000564845 MRPS30Q9NP92 439 aaKnown RBP3.13□□□□□ -1.91
CHD9-213ENST00000564845 TMEM138Q9NPI0 162 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 DOCK8Q8NF50 2099 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 ARRDC5A6NEK1 342 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 FAM171A2A8MVW0 826 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 ISM1B1AKI9 464 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 HRO43593 1189 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 BCAS1O75363 584 aaPredicted RBP3.13□□□□□ -1.91
CHD9-213ENST00000564845 GLCEO94923 617 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 H6PDO95479 791 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 RAB40ALP0C0E4 278 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 ZDHHC11BP0C7U3 371 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 ZNF35P13682 527 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 ADRB3P13945 408 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 DRD5P21918 477 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 CHMP24386 653 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms