RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 GLRX2Q9NS18 164 aa16.44■□□□□ 0.22
SYNGR3-204ENST00000564642 THUMPD1Q9NXG2 353 aaKnown RBP16.44■□□□□ 0.22
SYNGR3-204ENST00000564642 PROCRQ9UNN8 238 aa16.44■□□□□ 0.22
SYNGR3-204ENST00000564642 PCDHB14Q9Y5E9 798 aa16.44■□□□□ 0.22
SYNGR3-204ENST00000564642 MPDZO75970 2070 aa16.43■□□□□ 0.22
SYNGR3-204ENST00000564642 NR5A2O00482 541 aa16.43■□□□□ 0.22
SYNGR3-204ENST00000564642 DBIP07108 87 aaKnown RBP16.43■□□□□ 0.22
SYNGR3-204ENST00000564642 PABPC4LP0CB38 370 aaKnown RBP16.43■□□□□ 0.22
SYNGR3-204ENST00000564642 NCF2P19878 526 aaPredicted RBP16.43■□□□□ 0.22
SYNGR3-204ENST00000564642 SLC7A1P30825 629 aa16.43■□□□□ 0.22
SYNGR3-204ENST00000564642 KCNJ5P48544 419 aa16.43■□□□□ 0.22
SYNGR3-204ENST00000564642 ATP4BP51164 291 aa16.43■□□□□ 0.22
SYNGR3-204ENST00000564642 MVDP53602 400 aa16.43■□□□□ 0.22
SYNGR3-204ENST00000564642 MERTKQ12866 999 aa16.43■□□□□ 0.22
SYNGR3-204ENST00000564642 SQLEQ14534 574 aa16.43■□□□□ 0.22
SYNGR3-204ENST00000564642 AGKQ53H12 422 aa16.43■□□□□ 0.22
SYNGR3-204ENST00000564642 C3orf33Q6P1S2 294 aa16.43■□□□□ 0.22
SYNGR3-204ENST00000564642 BLOC1S3Q6QNY0 202 aa16.43■□□□□ 0.22
SYNGR3-204ENST00000564642 FUNDC1Q8IVP5 155 aa16.43■□□□□ 0.22
SYNGR3-204ENST00000564642 FAM71CQ8NEG0 241 aa16.43■□□□□ 0.22
SYNGR3-204ENST00000564642 WDR60Q8WVS4 1066 aa16.43■□□□□ 0.22
SYNGR3-204ENST00000564642 ROBO4Q8WZ75 1007 aa16.43■□□□□ 0.22
SYNGR3-204ENST00000564642 SPDL1Q96EA4 605 aa16.43■□□□□ 0.22
SYNGR3-204ENST00000564642 AURKBQ96GD4 344 aaPredicted RBP16.43■□□□□ 0.22
SYNGR3-204ENST00000564642 PAIP1Q9H074 479 aaKnown RBP16.43■□□□□ 0.22
SYNGR3-204ENST00000564642 RABEP2Q9H5N1 569 aa16.43■□□□□ 0.22
SYNGR3-204ENST00000564642 EXOSC3Q9NQT5 275 aaKnown RBP16.43■□□□□ 0.22
SYNGR3-204ENST00000564642 ACER3Q9NUN7 267 aa16.43■□□□□ 0.22
SYNGR3-204ENST00000564642 ELOVL5Q9NYP7 299 aa16.43■□□□□ 0.22
SYNGR3-204ENST00000564642 NDRG3Q9UGV2 375 aa16.43■□□□□ 0.22
SYNGR3-204ENST00000564642 CLEC4AQ9UMR7 237 aa16.43■□□□□ 0.22
SYNGR3-204ENST00000564642 APCP25054 2843 aa16.42■□□□□ 0.22
SYNGR3-204ENST00000564642 LRBAP50851 2863 aa16.42■□□□□ 0.22
SYNGR3-204ENST00000564642 A0A096LPI6 279 aa16.42■□□□□ 0.22
SYNGR3-204ENST00000564642 CLDN24A6NM45 220 aa16.42■□□□□ 0.22
SYNGR3-204ENST00000564642 CLIC1O00299 241 aa16.42■□□□□ 0.22
SYNGR3-204ENST00000564642 ETV2O00321 342 aaPredicted RBP16.42■□□□□ 0.22
SYNGR3-204ENST00000564642 EDF1O60869 148 aaKnown RBP16.42■□□□□ 0.22
SYNGR3-204ENST00000564642 BCAS1O75363 584 aaPredicted RBP16.42■□□□□ 0.22
SYNGR3-204ENST00000564642 CTAG2O75638 210 aa16.42■□□□□ 0.22
SYNGR3-204ENST00000564642 BCHEP06276 602 aa16.42■□□□□ 0.22
SYNGR3-204ENST00000564642 CD8BP10966 210 aa16.42■□□□□ 0.22
SYNGR3-204ENST00000564642 CRISP3P54108 245 aa16.42■□□□□ 0.22
SYNGR3-204ENST00000564642 FAM27E3Q08E93 113 aa16.42■□□□□ 0.22
SYNGR3-204ENST00000564642 GUSBP1Q15486 140 aa16.42■□□□□ 0.22
SYNGR3-204ENST00000564642 FBXW10Q5XX13 1052 aa16.42■□□□□ 0.22
SYNGR3-204ENST00000564642 ZNF610Q8N9Z0 462 aa16.42■□□□□ 0.22
SYNGR3-204ENST00000564642 OR6K3Q8NGY3 331 aa16.42■□□□□ 0.22
SYNGR3-204ENST00000564642 GPATCH1Q9BRR8 931 aaKnown RBP16.42■□□□□ 0.22
SYNGR3-204ENST00000564642 POLDIP3Q9BY77 421 aaKnown RBP16.42■□□□□ 0.22
SYNGR3-204ENST00000564642 CACYBPQ9HB71 228 aaKnown RBP16.42■□□□□ 0.22
SYNGR3-204ENST00000564642 NPHS2Q9NP85 383 aa16.42■□□□□ 0.22
SYNGR3-204ENST00000564642 TMEM45AQ9NWC5 275 aa16.42■□□□□ 0.22
SYNGR3-204ENST00000564642 DNAJB12Q9NXW2 375 aaKnown RBP16.42■□□□□ 0.22
SYNGR3-204ENST00000564642 DCTN4Q9UJW0 460 aa16.42■□□□□ 0.22
SYNGR3-204ENST00000564642 A6NNC1 897 aa16.41■□□□□ 0.22
SYNGR3-204ENST00000564642 SS18L1O75177 396 aaPredicted RBP16.41■□□□□ 0.22
SYNGR3-204ENST00000564642 CGAP01215 116 aa16.41■□□□□ 0.22
SYNGR3-204ENST00000564642 TFPTP0C1Z6 253 aa16.41■□□□□ 0.22
SYNGR3-204ENST00000564642 POU2F1P14859 743 aa16.41■□□□□ 0.22
SYNGR3-204ENST00000564642 CD79BP40259 229 aa16.41■□□□□ 0.22
SYNGR3-204ENST00000564642 APOBEC1P41238 236 aaKnown RBP16.41■□□□□ 0.22
SYNGR3-204ENST00000564642 DAZAP2Q15038 168 aaPredicted RBP16.41■□□□□ 0.22
SYNGR3-204ENST00000564642 RGNQ15493 299 aa16.41■□□□□ 0.22
SYNGR3-204ENST00000564642 ZNF239Q16600 458 aaKnown RBP16.41■□□□□ 0.22
SYNGR3-204ENST00000564642 ZNF474Q6S9Z5 364 aaPredicted RBP16.41■□□□□ 0.22
SYNGR3-204ENST00000564642 PLEKHM3Q6ZWE6 761 aa16.41■□□□□ 0.22
SYNGR3-204ENST00000564642 SLC38A5Q8WUX1 472 aa16.41■□□□□ 0.22
SYNGR3-204ENST00000564642 STON2Q8WXE9 905 aa16.41■□□□□ 0.22
SYNGR3-204ENST00000564642 CNOT9Q92600 299 aaKnown RBP16.41■□□□□ 0.22
SYNGR3-204ENST00000564642 DACH2Q96NX9 599 aa16.41■□□□□ 0.22
SYNGR3-204ENST00000564642 SIKE1Q9BRV8 207 aa16.41■□□□□ 0.22
SYNGR3-204ENST00000564642 SRXN1Q9BYN0 137 aa16.41■□□□□ 0.22
SYNGR3-204ENST00000564642 PLSCR4Q9NRQ2 329 aa16.41■□□□□ 0.22
SYNGR3-204ENST00000564642 RASSF1Q9NS23 344 aa16.41■□□□□ 0.22
SYNGR3-204ENST00000564642 TRIM33Q9UPN9 1127 aa16.41■□□□□ 0.22
SYNGR3-204ENST00000564642 A0A1W2PNR3 127 aa16.4■□□□□ 0.22
SYNGR3-204ENST00000564642 SH3D21A4FU49 640 aa16.4■□□□□ 0.22
SYNGR3-204ENST00000564642 CASKO14936 926 aa16.4■□□□□ 0.22
SYNGR3-204ENST00000564642 NID1P14543 1247 aa16.4■□□□□ 0.22
SYNGR3-204ENST00000564642 RPS4Y1P22090 263 aaKnown RBP16.4■□□□□ 0.22
SYNGR3-204ENST00000564642 IDH2P48735 452 aaKnown RBP16.4■□□□□ 0.22
SYNGR3-204ENST00000564642 PCYT1AP49585 367 aa16.4■□□□□ 0.22
SYNGR3-204ENST00000564642 RAC3P60763 192 aa16.4■□□□□ 0.22
SYNGR3-204ENST00000564642 FADDQ13158 208 aa16.4■□□□□ 0.22
SYNGR3-204ENST00000564642 RNPS1Q15287 305 aaKnown RBP16.4■□□□□ 0.22
SYNGR3-204ENST00000564642 MAPK11Q15759 364 aa16.4■□□□□ 0.22
SYNGR3-204ENST00000564642 GRINAQ7Z429 371 aa16.4■□□□□ 0.22
SYNGR3-204ENST00000564642 CDH24Q86UP0 819 aa16.4■□□□□ 0.22
SYNGR3-204ENST00000564642 OR52P1PQ8NH57 321 aa16.4■□□□□ 0.22
SYNGR3-204ENST00000564642 SLC25A43Q8WUT9 341 aaPredicted RBP16.4■□□□□ 0.22
SYNGR3-204ENST00000564642 OR5B2Q96R09 309 aa16.4■□□□□ 0.22
SYNGR3-204ENST00000564642 CLEC4MQ9H2X3 399 aaPredicted RBP16.4■□□□□ 0.22
SYNGR3-204ENST00000564642 COQ10BQ9H8M1 238 aa16.4■□□□□ 0.22
SYNGR3-204ENST00000564642 ZNF446Q9NWS9 450 aa16.4■□□□□ 0.22
SYNGR3-204ENST00000564642 ITGB1BP2Q9UKP3 347 aa16.4■□□□□ 0.22
SYNGR3-204ENST00000564642 ZNF232Q9UNY5 417 aa16.4■□□□□ 0.22
SYNGR3-204ENST00000564642 SPIN1Q9Y657 262 aaPredicted RBP16.4■□□□□ 0.22
SYNGR3-204ENST00000564642 POLQO75417 2590 aa16.4■□□□□ 0.22
SYNGR3-204ENST00000564642 A0A0G2JND7 137 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms