RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 ANKHD1Q8IWZ3 2542 aaKnown RBP27.51■■■□□ 2
CMTM4-204ENST00000563952 A6NNC1 897 aa27.51■■□□□ 1.99
CMTM4-204ENST00000563952 ENO4A6NNW6 628 aa27.51■■□□□ 1.99
CMTM4-204ENST00000563952 ETV2O00321 342 aaPredicted RBP27.51■■□□□ 1.99
CMTM4-204ENST00000563952 CGAP01215 116 aa27.51■■□□□ 1.99
CMTM4-204ENST00000563952 EPXP11678 715 aa27.51■■□□□ 1.99
CMTM4-204ENST00000563952 SLC7A1P30825 629 aa27.51■■□□□ 1.99
CMTM4-204ENST00000563952 MERTKQ12866 999 aa27.51■■□□□ 1.99
CMTM4-204ENST00000563952 BLOC1S3Q6QNY0 202 aa27.51■■□□□ 1.99
CMTM4-204ENST00000563952 ZNF474Q6S9Z5 364 aaPredicted RBP27.51■■□□□ 1.99
CMTM4-204ENST00000563952 WDR60Q8WVS4 1066 aa27.51■■□□□ 1.99
CMTM4-204ENST00000563952 CNOT9Q92600 299 aaKnown RBP27.51■■□□□ 1.99
CMTM4-204ENST00000563952 POLDIP3Q9BY77 421 aaKnown RBP27.51■■□□□ 1.99
CMTM4-204ENST00000563952 ACER3Q9NUN7 267 aa27.51■■□□□ 1.99
CMTM4-204ENST00000563952 BCHEP06276 602 aa27.5■■□□□ 1.99
CMTM4-204ENST00000563952 CD8BP10966 210 aa27.5■■□□□ 1.99
CMTM4-204ENST00000563952 KCNJ5P48544 419 aa27.5■■□□□ 1.99
CMTM4-204ENST00000563952 FAM27E3Q08E93 113 aa27.5■■□□□ 1.99
CMTM4-204ENST00000563952 MAPK11Q15759 364 aa27.5■■□□□ 1.99
CMTM4-204ENST00000563952 ZNF239Q16600 458 aaKnown RBP27.5■■□□□ 1.99
CMTM4-204ENST00000563952 C3orf33Q6P1S2 294 aa27.5■■□□□ 1.99
CMTM4-204ENST00000563952 ZNF610Q8N9Z0 462 aa27.5■■□□□ 1.99
CMTM4-204ENST00000563952 CPNE4Q96A23 557 aaPredicted RBP27.5■■□□□ 1.99
CMTM4-204ENST00000563952 SPDL1Q96EA4 605 aa27.5■■□□□ 1.99
CMTM4-204ENST00000563952 COQ10BQ9H8M1 238 aa27.5■■□□□ 1.99
CMTM4-204ENST00000563952 NPHS2Q9NP85 383 aa27.5■■□□□ 1.99
CMTM4-204ENST00000563952 EXOSC3Q9NQT5 275 aaKnown RBP27.5■■□□□ 1.99
CMTM4-204ENST00000563952 DCTN4Q9UJW0 460 aa27.5■■□□□ 1.99
CMTM4-204ENST00000563952 ITGB1BP2Q9UKP3 347 aa27.5■■□□□ 1.99
CMTM4-204ENST00000563952 CSMD1Q96PZ7 3565 aa27.5■■□□□ 1.99
CMTM4-204ENST00000563952 POLQO75417 2590 aa27.49■■□□□ 1.99
CMTM4-204ENST00000563952 A0A1W2PNR3 127 aa27.49■■□□□ 1.99
CMTM4-204ENST00000563952 SS18L1O75177 396 aaPredicted RBP27.49■■□□□ 1.99
CMTM4-204ENST00000563952 IL7RP16871 459 aa27.49■■□□□ 1.99
CMTM4-204ENST00000563952 PLAURQ03405 335 aa27.49■■□□□ 1.99
CMTM4-204ENST00000563952 GNA13Q14344 377 aa27.49■■□□□ 1.99
CMTM4-204ENST00000563952 SQLEQ14534 574 aa27.49■■□□□ 1.99
CMTM4-204ENST00000563952 AGKQ53H12 422 aa27.49■■□□□ 1.99
CMTM4-204ENST00000563952 PLEKHM3Q6ZWE6 761 aa27.49■■□□□ 1.99
CMTM4-204ENST00000563952 CMIPQ8IY22 773 aa27.49■■□□□ 1.99
CMTM4-204ENST00000563952 SLC39A3Q9BRY0 314 aa27.49■■□□□ 1.99
CMTM4-204ENST00000563952 SERINC1Q9NRX5 453 aa27.49■■□□□ 1.99
CMTM4-204ENST00000563952 GLRX2Q9NS18 164 aa27.49■■□□□ 1.99
CMTM4-204ENST00000563952 ZNF446Q9NWS9 450 aa27.49■■□□□ 1.99
CMTM4-204ENST00000563952 MYO9AB2RTY4 2548 aa27.49■■□□□ 1.99
CMTM4-204ENST00000563952 MPDZO75970 2070 aa27.48■■□□□ 1.99
CMTM4-204ENST00000563952 A0A096LPI6 279 aa27.48■■□□□ 1.99
CMTM4-204ENST00000563952 EDF1O60869 148 aaKnown RBP27.48■■□□□ 1.99
CMTM4-204ENST00000563952 DBIP07108 87 aaKnown RBP27.48■■□□□ 1.99
CMTM4-204ENST00000563952 POU2F1P14859 743 aa27.48■■□□□ 1.99
CMTM4-204ENST00000563952 RPS4Y1P22090 263 aaKnown RBP27.48■■□□□ 1.99
CMTM4-204ENST00000563952 CD79BP40259 229 aa27.48■■□□□ 1.99
CMTM4-204ENST00000563952 ATP4BP51164 291 aa27.48■■□□□ 1.99
CMTM4-204ENST00000563952 DAZAP2Q15038 168 aaPredicted RBP27.48■■□□□ 1.99
CMTM4-204ENST00000563952 FBXW10Q5XX13 1052 aa27.48■■□□□ 1.99
CMTM4-204ENST00000563952 GTF2IRD2BQ6EKJ0 949 aa27.48■■□□□ 1.99
CMTM4-204ENST00000563952 GTF2IRD2Q86UP8 949 aa27.48■■□□□ 1.99
CMTM4-204ENST00000563952 PEX5LQ8IYB4 626 aa27.48■■□□□ 1.99
CMTM4-204ENST00000563952 OR6K3Q8NGY3 331 aa27.48■■□□□ 1.99
CMTM4-204ENST00000563952 SLC38A5Q8WUX1 472 aa27.48■■□□□ 1.99
CMTM4-204ENST00000563952 OR5B2Q96R09 309 aa27.48■■□□□ 1.99
CMTM4-204ENST00000563952 CLEC4MQ9H2X3 399 aaPredicted RBP27.48■■□□□ 1.99
CMTM4-204ENST00000563952 RASSF1Q9NS23 344 aa27.48■■□□□ 1.99
CMTM4-204ENST00000563952 CALML5Q9NZT1 146 aa27.48■■□□□ 1.99
CMTM4-204ENST00000563952 SH3D21A4FU49 640 aa27.47■■□□□ 1.99
CMTM4-204ENST00000563952 CLIC1O00299 241 aa27.47■■□□□ 1.99
CMTM4-204ENST00000563952 TFPTP0C1Z6 253 aa27.47■■□□□ 1.99
CMTM4-204ENST00000563952 PABPC4LP0CB38 370 aaKnown RBP27.47■■□□□ 1.99
CMTM4-204ENST00000563952 NCF2P19878 526 aaPredicted RBP27.47■■□□□ 1.99
CMTM4-204ENST00000563952 CRISP3P54108 245 aa27.47■■□□□ 1.99
CMTM4-204ENST00000563952 EXOC3L2Q2M3D2 409 aa27.47■■□□□ 1.99
CMTM4-204ENST00000563952 RPS26P11Q5JNZ5 115 aaPredicted RBP27.47■■□□□ 1.99
CMTM4-204ENST00000563952 RNF128Q8TEB7 428 aa27.47■■□□□ 1.99
CMTM4-204ENST00000563952 ABHD3Q8WU67 409 aa27.47■■□□□ 1.99
CMTM4-204ENST00000563952 NRGNQ92686 78 aa27.47■■□□□ 1.99
CMTM4-204ENST00000563952 PMM1Q92871 262 aa27.47■■□□□ 1.99
CMTM4-204ENST00000563952 THUMPD1Q9NXG2 353 aaKnown RBP27.47■■□□□ 1.99
CMTM4-204ENST00000563952 ELOVL5Q9NYP7 299 aa27.47■■□□□ 1.99
CMTM4-204ENST00000563952 CSMD2Q7Z408 3487 aa27.46■■□□□ 1.99
CMTM4-204ENST00000563952 TMEM247A6NEH6 219 aa27.46■■□□□ 1.99
CMTM4-204ENST00000563952 AP3D1O14617 1153 aa27.46■■□□□ 1.99
CMTM4-204ENST00000563952 ADAM11O75078 769 aa27.46■■□□□ 1.99
CMTM4-204ENST00000563952 NID1P14543 1247 aa27.46■■□□□ 1.99
CMTM4-204ENST00000563952 IDH2P48735 452 aaKnown RBP27.46■■□□□ 1.99
CMTM4-204ENST00000563952 RGNQ15493 299 aa27.46■■□□□ 1.99
CMTM4-204ENST00000563952 MRPL2Q5T653 305 aaKnown RBP27.46■■□□□ 1.99
CMTM4-204ENST00000563952 FCRLAQ7L513 359 aa27.46■■□□□ 1.99
CMTM4-204ENST00000563952 OR52P1PQ8NH57 321 aa27.46■■□□□ 1.99
CMTM4-204ENST00000563952 TMEM19Q96HH6 336 aa27.46■■□□□ 1.99
CMTM4-204ENST00000563952 DACH2Q96NX9 599 aa27.46■■□□□ 1.99
CMTM4-204ENST00000563952 RAD21L1Q9H4I0 556 aa27.46■■□□□ 1.99
CMTM4-204ENST00000563952 CTPS2Q9NRF8 586 aa27.46■■□□□ 1.99
CMTM4-204ENST00000563952 NDRG3Q9UGV2 375 aa27.46■■□□□ 1.99
CMTM4-204ENST00000563952 IGHV3-15A0A0B4J1V0 119 aa27.45■■□□□ 1.98
CMTM4-204ENST00000563952 NUDT7P0C024 238 aa27.45■■□□□ 1.98
CMTM4-204ENST00000563952 CD1EP15812 388 aa27.45■■□□□ 1.98
CMTM4-204ENST00000563952 HOXB9P17482 250 aaPredicted RBP27.45■■□□□ 1.98
CMTM4-204ENST00000563952 AGTR1P30556 359 aa27.45■■□□□ 1.98
CMTM4-204ENST00000563952 APOBEC1P41238 236 aaKnown RBP27.45■■□□□ 1.98
CMTM4-204ENST00000563952 IRX1P78414 480 aaPredicted RBP27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms