RNA–Protein interactions for RNA: ENST00000563348.1

TRADD-203, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 833 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-203ENST00000563348 GTF2IRD2BQ6EKJ0 949 aa17.02■□□□□ 0.32
TRADD-203ENST00000563348 HMGN2P46Q86SG4 172 aa17.02■□□□□ 0.32
TRADD-203ENST00000563348 CDH24Q86UP0 819 aa17.02■□□□□ 0.32
TRADD-203ENST00000563348 GTF2IRD2Q86UP8 949 aa17.02■□□□□ 0.32
TRADD-203ENST00000563348 FUNDC1Q8IVP5 155 aa17.02■□□□□ 0.32
TRADD-203ENST00000563348 ZNF610Q8N9Z0 462 aa17.02■□□□□ 0.32
TRADD-203ENST00000563348 ATP6V1C2Q8NEY4 427 aa17.02■□□□□ 0.32
TRADD-203ENST00000563348 GPATCH1Q9BRR8 931 aaKnown RBP17.02■□□□□ 0.32
TRADD-203ENST00000563348 SLC39A3Q9BRY0 314 aa17.02■□□□□ 0.32
TRADD-203ENST00000563348 QRSL1Q9H0R6 528 aaKnown RBP17.02■□□□□ 0.32
TRADD-203ENST00000563348 EXOSC3Q9NQT5 275 aaKnown RBP17.02■□□□□ 0.32
TRADD-203ENST00000563348 PLSCR4Q9NRQ2 329 aa17.02■□□□□ 0.32
TRADD-203ENST00000563348 ELOVL5Q9NYP7 299 aa17.02■□□□□ 0.32
TRADD-203ENST00000563348 CLEC4AQ9UMR7 237 aa17.02■□□□□ 0.32
TRADD-203ENST00000563348 PROCRQ9UNN8 238 aa17.02■□□□□ 0.32
TRADD-203ENST00000563348 EMC9Q9Y3B6 208 aa17.02■□□□□ 0.32
TRADD-203ENST00000563348 CLDN24A6NM45 220 aa17.01■□□□□ 0.31
TRADD-203ENST00000563348 PLGP00747 810 aaPredicted RBP17.01■□□□□ 0.31
TRADD-203ENST00000563348 CPOXP36551 454 aa17.01■□□□□ 0.31
TRADD-203ENST00000563348 CD79BP40259 229 aa17.01■□□□□ 0.31
TRADD-203ENST00000563348 CRATP43155 626 aa17.01■□□□□ 0.31
TRADD-203ENST00000563348 CTBP2P56545 445 aa17.01■□□□□ 0.31
TRADD-203ENST00000563348 MAPK11Q15759 364 aa17.01■□□□□ 0.31
TRADD-203ENST00000563348 ZNF239Q16600 458 aaKnown RBP17.01■□□□□ 0.31
TRADD-203ENST00000563348 GTDC1Q4AE62 458 aa17.01■□□□□ 0.31
TRADD-203ENST00000563348 BLOC1S3Q6QNY0 202 aa17.01■□□□□ 0.31
TRADD-203ENST00000563348 CMIPQ8IY22 773 aa17.01■□□□□ 0.31
TRADD-203ENST00000563348 OR6K3Q8NGY3 331 aa17.01■□□□□ 0.31
TRADD-203ENST00000563348 ROBO4Q8WZ75 1007 aa17.01■□□□□ 0.31
TRADD-203ENST00000563348 CPNE4Q96A23 557 aaPredicted RBP17.01■□□□□ 0.31
TRADD-203ENST00000563348 POLDIP3Q9BY77 421 aaKnown RBP17.01■□□□□ 0.31
TRADD-203ENST00000563348 SRXN1Q9BYN0 137 aa17.01■□□□□ 0.31
TRADD-203ENST00000563348 PAIP1Q9H074 479 aaKnown RBP17.01■□□□□ 0.31
TRADD-203ENST00000563348 COQ10BQ9H8M1 238 aa17.01■□□□□ 0.31
TRADD-203ENST00000563348 SERINC1Q9NRX5 453 aa17.01■□□□□ 0.31
TRADD-203ENST00000563348 TMEM45AQ9NWC5 275 aa17.01■□□□□ 0.31
TRADD-203ENST00000563348 NDRG3Q9UGV2 375 aa17.01■□□□□ 0.31
TRADD-203ENST00000563348 PCDHB14Q9Y5E9 798 aa17.01■□□□□ 0.31
TRADD-203ENST00000563348 TFPTP0C1Z6 253 aa17■□□□□ 0.31
TRADD-203ENST00000563348 ETFAP13804 333 aa17■□□□□ 0.31
TRADD-203ENST00000563348 RAC3P60763 192 aa17■□□□□ 0.31
TRADD-203ENST00000563348 IRX1P78414 480 aaPredicted RBP17■□□□□ 0.31
TRADD-203ENST00000563348 PLAURQ03405 335 aa17■□□□□ 0.31
TRADD-203ENST00000563348 MERTKQ12866 999 aa17■□□□□ 0.31
TRADD-203ENST00000563348 GNA13Q14344 377 aa17■□□□□ 0.31
TRADD-203ENST00000563348 SLC2A7Q6PXP3 512 aa17■□□□□ 0.31
TRADD-203ENST00000563348 PLEKHM3Q6ZWE6 761 aa17■□□□□ 0.31
TRADD-203ENST00000563348 ARFGAP2Q8N6H7 521 aa17■□□□□ 0.31
TRADD-203ENST00000563348 STON2Q8WXE9 905 aa17■□□□□ 0.31
TRADD-203ENST00000563348 CNOT9Q92600 299 aaKnown RBP17■□□□□ 0.31
TRADD-203ENST00000563348 AURKBQ96GD4 344 aaPredicted RBP17■□□□□ 0.31
TRADD-203ENST00000563348 REXO5Q96IC2 774 aaKnown RBP17■□□□□ 0.31
TRADD-203ENST00000563348 TEP1Q99973 2627 aaKnown RBP17■□□□□ 0.31
TRADD-203ENST00000563348 CLEC4MQ9H2X3 399 aaPredicted RBP17■□□□□ 0.31
TRADD-203ENST00000563348 P2RX2Q9UBL9 471 aa17■□□□□ 0.31
TRADD-203ENST00000563348 AKAP9Q99996 3911 aa17■□□□□ 0.31
TRADD-203ENST00000563348 SH3D21A4FU49 640 aa16.99■□□□□ 0.31
TRADD-203ENST00000563348 GOSR1O95249 250 aa16.99■□□□□ 0.31
TRADD-203ENST00000563348 DBIP07108 87 aaKnown RBP16.99■□□□□ 0.31
TRADD-203ENST00000563348 POU2F1P14859 743 aa16.99■□□□□ 0.31
TRADD-203ENST00000563348 IL7RP16871 459 aa16.99■□□□□ 0.31
TRADD-203ENST00000563348 RPS4Y1P22090 263 aaKnown RBP16.99■□□□□ 0.31
TRADD-203ENST00000563348 SLC7A1P30825 629 aa16.99■□□□□ 0.31
TRADD-203ENST00000563348 RYKP34925 604 aa16.99■□□□□ 0.31
TRADD-203ENST00000563348 APOBEC1P41238 236 aaKnown RBP16.99■□□□□ 0.31
TRADD-203ENST00000563348 ATP4BP51164 291 aa16.99■□□□□ 0.31
TRADD-203ENST00000563348 DSTNP60981 165 aa16.99■□□□□ 0.31
TRADD-203ENST00000563348 C3orf33Q6P1S2 294 aa16.99■□□□□ 0.31
TRADD-203ENST00000563348 ZNF563Q8TA94 476 aa16.99■□□□□ 0.31
TRADD-203ENST00000563348 RNF128Q8TEB7 428 aa16.99■□□□□ 0.31
TRADD-203ENST00000563348 SLC38A5Q8WUX1 472 aa16.99■□□□□ 0.31
TRADD-203ENST00000563348 SLC52A3Q9NQ40 469 aa16.99■□□□□ 0.31
TRADD-203ENST00000563348 THUMPD1Q9NXG2 353 aaKnown RBP16.99■□□□□ 0.31
TRADD-203ENST00000563348 CALML5Q9NZT1 146 aa16.99■□□□□ 0.31
TRADD-203ENST00000563348 CCDC167Q9P0B6 97 aa16.99■□□□□ 0.31
TRADD-203ENST00000563348 ITGB1BP2Q9UKP3 347 aa16.99■□□□□ 0.31
TRADD-203ENST00000563348 F8P00451 2351 aa16.98■□□□□ 0.31
TRADD-203ENST00000563348 A0A096LPI6 279 aa16.98■□□□□ 0.31
TRADD-203ENST00000563348 A0A1W2PNR3 127 aa16.98■□□□□ 0.31
TRADD-203ENST00000563348 C16orf97H3BN30 126 aa16.98■□□□□ 0.31
TRADD-203ENST00000563348 CLIC1O00299 241 aa16.98■□□□□ 0.31
TRADD-203ENST00000563348 CASKO14936 926 aa16.98■□□□□ 0.31
TRADD-203ENST00000563348 ADAM11O75078 769 aa16.98■□□□□ 0.31
TRADD-203ENST00000563348 HOXB9P17482 250 aaPredicted RBP16.98■□□□□ 0.31
TRADD-203ENST00000563348 UGT2B10P36537 528 aa16.98■□□□□ 0.31
TRADD-203ENST00000563348 KCNJ5P48544 419 aa16.98■□□□□ 0.31
TRADD-203ENST00000563348 RNPS1Q15287 305 aaKnown RBP16.98■□□□□ 0.31
TRADD-203ENST00000563348 FCRLAQ7L513 359 aa16.98■□□□□ 0.31
TRADD-203ENST00000563348 GRINAQ7Z429 371 aa16.98■□□□□ 0.31
TRADD-203ENST00000563348 CDC20BQ86Y33 519 aa16.98■□□□□ 0.31
TRADD-203ENST00000563348 PEX5LQ8IYB4 626 aa16.98■□□□□ 0.31
TRADD-203ENST00000563348 WDR60Q8WVS4 1066 aa16.98■□□□□ 0.31
TRADD-203ENST00000563348 NRGNQ92686 78 aa16.98■□□□□ 0.31
TRADD-203ENST00000563348 SPDL1Q96EA4 605 aa16.98■□□□□ 0.31
TRADD-203ENST00000563348 WFIKKN1Q96NZ8 548 aa16.98■□□□□ 0.31
TRADD-203ENST00000563348 CCDC106Q9BWC9 280 aa16.98■□□□□ 0.31
TRADD-203ENST00000563348 GP6Q9HCN6 339 aa16.98■□□□□ 0.31
TRADD-203ENST00000563348 DSPPQ9NZW4 1301 aa16.97■□□□□ 0.31
TRADD-203ENST00000563348 EDF1O60869 148 aaKnown RBP16.97■□□□□ 0.31
TRADD-203ENST00000563348 PRKD3O94806 890 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms