RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 NACC2Q96BF6 587 aa17.56■□□□□ 0.4
SMPD3-203ENST00000563226 TNFRSF13CQ96RJ3 184 aa17.56■□□□□ 0.4
SMPD3-203ENST00000563226 GAL3ST4Q96RP7 486 aa17.56■□□□□ 0.4
SMPD3-203ENST00000563226 ZNF649Q9BS31 505 aa17.56■□□□□ 0.4
SMPD3-203ENST00000563226 VN1R1Q9GZP7 353 aa17.56■□□□□ 0.4
SMPD3-203ENST00000563226 NXF2Q9GZY0 626 aaKnown RBP17.56■□□□□ 0.4
SMPD3-203ENST00000563226 LRRN3Q9H3W5 708 aa17.56■□□□□ 0.4
SMPD3-203ENST00000563226 MCCC2Q9HCC0 563 aa17.56■□□□□ 0.4
SMPD3-203ENST00000563226 PALMDQ9NP74 551 aa17.56■□□□□ 0.4
SMPD3-203ENST00000563226 RPS6KB2Q9UBS0 482 aa17.56■□□□□ 0.4
SMPD3-203ENST00000563226 YARS2Q9Y2Z4 477 aaKnown RBP17.56■□□□□ 0.4
SMPD3-203ENST00000563226 EXOSC1Q9Y3B2 195 aaKnown RBP17.56■□□□□ 0.4
SMPD3-203ENST00000563226 SPIN1Q9Y657 262 aaPredicted RBP17.56■□□□□ 0.4
SMPD3-203ENST00000563226 MPDZO75970 2070 aa17.55■□□□□ 0.4
SMPD3-203ENST00000563226 CCDC163A0A0D9SF12 145 aa17.55■□□□□ 0.4
SMPD3-203ENST00000563226 CDC14CA4D256 554 aa17.55■□□□□ 0.4
SMPD3-203ENST00000563226 EFCAB7A8K855 629 aa17.55■□□□□ 0.4
SMPD3-203ENST00000563226 PPP1R3DO95685 299 aa17.55■□□□□ 0.4
SMPD3-203ENST00000563226 IL33O95760 270 aa17.55■□□□□ 0.4
SMPD3-203ENST00000563226 HOXA6P31267 233 aa17.55■□□□□ 0.4
SMPD3-203ENST00000563226 SLC1A3P43003 542 aa17.55■□□□□ 0.4
SMPD3-203ENST00000563226 RGS19P49795 217 aa17.55■□□□□ 0.4
SMPD3-203ENST00000563226 FOXK2Q01167 660 aa17.55■□□□□ 0.4
SMPD3-203ENST00000563226 ITGADQ13349 1161 aa17.55■□□□□ 0.4
SMPD3-203ENST00000563226 NSDHLQ15738 373 aa17.55■□□□□ 0.4
SMPD3-203ENST00000563226 NIPAL3Q6P499 406 aa17.55■□□□□ 0.4
SMPD3-203ENST00000563226 SHISA6Q6ZSJ9 500 aa17.55■□□□□ 0.4
SMPD3-203ENST00000563226 OAFQ86UD1 273 aa17.55■□□□□ 0.4
SMPD3-203ENST00000563226 ZNF485Q8NCK3 441 aa17.55■□□□□ 0.4
SMPD3-203ENST00000563226 SAP25Q8TEE9 199 aa17.55■□□□□ 0.4
SMPD3-203ENST00000563226 S100ZQ8WXG8 99 aa17.55■□□□□ 0.4
SMPD3-203ENST00000563226 KLHDC3Q9BQ90 382 aa17.55■□□□□ 0.4
SMPD3-203ENST00000563226 IER2Q9BTL4 223 aa17.55■□□□□ 0.4
SMPD3-203ENST00000563226 C6orf62Q9GZU0 229 aaPredicted RBP17.55■□□□□ 0.4
SMPD3-203ENST00000563226 CHCHD3Q9NX63 227 aaKnown RBP17.55■□□□□ 0.4
SMPD3-203ENST00000563226 EXOGQ9Y2C4 368 aaKnown RBP17.55■□□□□ 0.4
SMPD3-203ENST00000563226 FRYLO94915 3013 aa17.55■□□□□ 0.4
SMPD3-203ENST00000563226 A0A1W2PQM1 296 aa17.54■□□□□ 0.4
SMPD3-203ENST00000563226 SIGLEC6O43699 453 aa17.54■□□□□ 0.4
SMPD3-203ENST00000563226 HCN1O60741 890 aa17.54■□□□□ 0.4
SMPD3-203ENST00000563226 LALBAP00709 142 aa17.54■□□□□ 0.4
SMPD3-203ENST00000563226 CPEP16870 476 aa17.54■□□□□ 0.4
SMPD3-203ENST00000563226 ZSWIM7Q19AV6 140 aa17.54■□□□□ 0.4
SMPD3-203ENST00000563226 TMEM44Q2T9K0 475 aa17.54■□□□□ 0.4
SMPD3-203ENST00000563226 RPL13AP3Q6NVV1 102 aa17.54■□□□□ 0.4
SMPD3-203ENST00000563226 TMEM71Q6P5X7 295 aa17.54■□□□□ 0.4
SMPD3-203ENST00000563226 MAMSTRQ6ZN01 415 aa17.54■□□□□ 0.4
SMPD3-203ENST00000563226 LANCL3Q6ZV70 420 aa17.54■□□□□ 0.4
SMPD3-203ENST00000563226 COX15Q7KZN9 410 aa17.54■□□□□ 0.4
SMPD3-203ENST00000563226 C9orf40Q8IXQ3 194 aa17.54■□□□□ 0.4
SMPD3-203ENST00000563226 FAM71CQ8NEG0 241 aa17.54■□□□□ 0.4
SMPD3-203ENST00000563226 LCORQ96JN0 433 aaPredicted RBP17.54■□□□□ 0.4
SMPD3-203ENST00000563226 MMP27Q9H306 513 aa17.54■□□□□ 0.4
SMPD3-203ENST00000563226 CMC2Q9NRP2 79 aa17.54■□□□□ 0.4
SMPD3-203ENST00000563226 SLC22A11Q9NSA0 550 aa17.54■□□□□ 0.4
SMPD3-203ENST00000563226 SEC14L4Q9UDX3 406 aa17.54■□□□□ 0.4
SMPD3-203ENST00000563226 MKL2Q9ULH7 1088 aa17.54■□□□□ 0.4
SMPD3-203ENST00000563226 STUB1Q9UNE7 303 aa17.54■□□□□ 0.4
SMPD3-203ENST00000563226 FRG2CA6NGY1 282 aa17.54■□□□□ 0.4
SMPD3-203ENST00000563226 UTS2O95399 124 aa17.54■□□□□ 0.4
SMPD3-203ENST00000563226 HLA-BQ31612 363 aa17.54■□□□□ 0.4
SMPD3-203ENST00000563226 C11orf91Q3C1V1 193 aa17.54■□□□□ 0.4
SMPD3-203ENST00000563226 ZNF362Q5T0B9 420 aaPredicted RBP17.54■□□□□ 0.4
SMPD3-203ENST00000563226 CBLN3Q6UW01 205 aa17.54■□□□□ 0.4
SMPD3-203ENST00000563226 Q6ZNX1 250 aa17.54■□□□□ 0.4
SMPD3-203ENST00000563226 WDR5BQ86VZ2 330 aa17.54■□□□□ 0.4
SMPD3-203ENST00000563226 ZFP41Q8N8Y5 198 aa17.54■□□□□ 0.4
SMPD3-203ENST00000563226 OR4C6Q8NH72 309 aa17.54■□□□□ 0.4
SMPD3-203ENST00000563226 PIGKQ92643 395 aa17.54■□□□□ 0.4
SMPD3-203ENST00000563226 TMEM203Q969S6 136 aa17.54■□□□□ 0.4
SMPD3-203ENST00000563226 C3orf49Q96BT1 292 aa17.54■□□□□ 0.4
SMPD3-203ENST00000563226 ZNF524Q96C55 264 aa17.54■□□□□ 0.4
SMPD3-203ENST00000563226 UBQLN4Q9NRR5 601 aa17.54■□□□□ 0.4
SMPD3-203ENST00000563226 H2AFY2Q9P0M6 372 aaPredicted RBP17.54■□□□□ 0.4
SMPD3-203ENST00000563226 SLC35A3Q9Y2D2 325 aa17.54■□□□□ 0.4
SMPD3-203ENST00000563226 ASCC3Q8N3C0 2202 aaKnown RBP17.53■□□□□ 0.4
SMPD3-203ENST00000563226 DYRK3O43781 588 aa17.53■□□□□ 0.4
SMPD3-203ENST00000563226 TIAF1O95411 115 aa17.53■□□□□ 0.4
SMPD3-203ENST00000563226 IGHA1P01876 353 aa17.53■□□□□ 0.4
SMPD3-203ENST00000563226 PSMA1P25786 263 aaKnown RBP17.53■□□□□ 0.4
SMPD3-203ENST00000563226 NOS3P29474 1203 aa17.53■□□□□ 0.4
SMPD3-203ENST00000563226 CCL7P80098 99 aa17.53■□□□□ 0.4
SMPD3-203ENST00000563226 IFITM3Q01628 133 aa17.53■□□□□ 0.4
SMPD3-203ENST00000563226 EBPQ15125 230 aaKnown RBP17.53■□□□□ 0.4
SMPD3-203ENST00000563226 NR0B2Q15466 257 aa17.53■□□□□ 0.4
SMPD3-203ENST00000563226 ZNF791Q3KP31 576 aaPredicted RBP17.53■□□□□ 0.4
SMPD3-203ENST00000563226 LRRC17Q8N6Y2 441 aa17.53■□□□□ 0.4
SMPD3-203ENST00000563226 OR51G2Q8NGK0 314 aa17.53■□□□□ 0.4
SMPD3-203ENST00000563226 OR2I1PQ8NGU4 316 aa17.53■□□□□ 0.4
SMPD3-203ENST00000563226 PHOSPHO1Q8TCT1 267 aa17.53■□□□□ 0.4
SMPD3-203ENST00000563226 PTP4A1Q93096 173 aa17.53■□□□□ 0.4
SMPD3-203ENST00000563226 KISS1RQ969F8 398 aaPredicted RBP17.53■□□□□ 0.4
SMPD3-203ENST00000563226 ADOQ96SZ5 270 aa17.53■□□□□ 0.4
SMPD3-203ENST00000563226 ASPNQ9BXN1 380 aa17.53■□□□□ 0.4
SMPD3-203ENST00000563226 RTN4RQ9BZR6 473 aa17.53■□□□□ 0.4
SMPD3-203ENST00000563226 FN3KQ9H479 309 aa17.53■□□□□ 0.4
SMPD3-203ENST00000563226 PRMT8Q9NR22 394 aaPredicted RBP17.53■□□□□ 0.4
SMPD3-203ENST00000563226 B3GNT3Q9Y2A9 372 aa17.53■□□□□ 0.4
SMPD3-203ENST00000563226 A0A087WUJ7 227 aa17.52■□□□□ 0.4
SMPD3-203ENST00000563226 SLC9A3P48764 834 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms