RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 BLOC1S6Q9UL45 172 aa16.5■□□□□ 0.23
COMMD4-208ENST00000563220 MASP2O00187 686 aa16.5■□□□□ 0.23
COMMD4-208ENST00000563220 HCRTR2O43614 444 aa16.5■□□□□ 0.23
COMMD4-208ENST00000563220 SCO2O43819 266 aa16.5■□□□□ 0.23
COMMD4-208ENST00000563220 OR2J2O76002 312 aa16.5■□□□□ 0.23
COMMD4-208ENST00000563220 FTH1P19P0C7X4 201 aa16.5■□□□□ 0.23
COMMD4-208ENST00000563220 MST1P26927 711 aa16.5■□□□□ 0.23
COMMD4-208ENST00000563220 GABARAPL2P60520 117 aa16.5■□□□□ 0.23
COMMD4-208ENST00000563220 PLAG1Q6DJT9 500 aa16.5■□□□□ 0.23
COMMD4-208ENST00000563220 PTCHD4Q6ZW05 846 aa16.5■□□□□ 0.23
COMMD4-208ENST00000563220 DNAJA4Q8WW22 397 aaPredicted RBP16.5■□□□□ 0.23
COMMD4-208ENST00000563220 KRCC1Q9NPI7 259 aaPredicted RBP16.5■□□□□ 0.23
COMMD4-208ENST00000563220 A0A087WUJ7 227 aa16.49■□□□□ 0.23
COMMD4-208ENST00000563220 A0A1W2PQ72 361 aa16.49■□□□□ 0.23
COMMD4-208ENST00000563220 CCDC160A6NGH7 325 aa16.49■□□□□ 0.23
COMMD4-208ENST00000563220 GMFGO60234 142 aa16.49■□□□□ 0.23
COMMD4-208ENST00000563220 EIF4E2O60573 245 aaKnown RBP16.49■□□□□ 0.23
COMMD4-208ENST00000563220 TNFSF15O95150 251 aa16.49■□□□□ 0.23
COMMD4-208ENST00000563220 IGHEP01854 428 aa16.49■□□□□ 0.23
COMMD4-208ENST00000563220 NAGAP17050 411 aa16.49■□□□□ 0.23
COMMD4-208ENST00000563220 RBM34P42696 430 aaKnown RBP16.49■□□□□ 0.23
COMMD4-208ENST00000563220 CTBP2P56545 445 aa16.49■□□□□ 0.23
COMMD4-208ENST00000563220 EXT1Q16394 746 aa16.49■□□□□ 0.23
COMMD4-208ENST00000563220 BROXQ5VW32 411 aa16.49■□□□□ 0.23
COMMD4-208ENST00000563220 WBP2NLQ6ICG8 309 aa16.49■□□□□ 0.23
COMMD4-208ENST00000563220 ZNF620Q6ZNG0 422 aa16.49■□□□□ 0.23
COMMD4-208ENST00000563220 TMPRSS11FQ6ZWK6 438 aa16.49■□□□□ 0.23
COMMD4-208ENST00000563220 NDUFAF7Q7L592 441 aa16.49■□□□□ 0.23
COMMD4-208ENST00000563220 PPP1R32Q7Z5V6 425 aa16.49■□□□□ 0.23
COMMD4-208ENST00000563220 M1APQ8TC57 530 aa16.49■□□□□ 0.23
COMMD4-208ENST00000563220 TMIGD2Q96BF3 282 aa16.49■□□□□ 0.23
COMMD4-208ENST00000563220 BPIFA2Q96DR5 249 aa16.49■□□□□ 0.23
COMMD4-208ENST00000563220 IL4I1Q96RQ9 567 aa16.49■□□□□ 0.23
COMMD4-208ENST00000563220 DUSP21Q9H596 190 aa16.49■□□□□ 0.23
COMMD4-208ENST00000563220 MMP25Q9NPA2 562 aa16.49■□□□□ 0.23
COMMD4-208ENST00000563220 IL20Q9NYY1 176 aa16.49■□□□□ 0.23
COMMD4-208ENST00000563220 SELENONQ9NZV5 590 aa16.49■□□□□ 0.23
COMMD4-208ENST00000563220 ICAM5Q9UMF0 924 aa16.49■□□□□ 0.23
COMMD4-208ENST00000563220 HEATR5AQ86XA9 2040 aa16.48■□□□□ 0.23
COMMD4-208ENST00000563220 UNC119BA6NIH7 251 aa16.48■□□□□ 0.23
COMMD4-208ENST00000563220 FOXD2O60548 495 aaPredicted RBP16.48■□□□□ 0.23
COMMD4-208ENST00000563220 F8A1P23610 371 aa16.48■□□□□ 0.23
COMMD4-208ENST00000563220 SLC35A2P78381 396 aa16.48■□□□□ 0.23
COMMD4-208ENST00000563220 KCTD8Q6ZWB6 473 aa16.48■□□□□ 0.23
COMMD4-208ENST00000563220 TEX47Q8TBZ9 253 aa16.48■□□□□ 0.23
COMMD4-208ENST00000563220 SLC25A19Q9HC21 320 aa16.48■□□□□ 0.23
COMMD4-208ENST00000563220 ZNF160Q9HCG1 818 aa16.48■□□□□ 0.23
COMMD4-208ENST00000563220 AMBNQ9NP70 447 aa16.48■□□□□ 0.23
COMMD4-208ENST00000563220 SCN3BQ9NY72 215 aa16.48■□□□□ 0.23
COMMD4-208ENST00000563220 TVP23BQ9NYZ1 205 aa16.48■□□□□ 0.23
COMMD4-208ENST00000563220 RSL24D1Q9UHA3 163 aaKnown RBP16.48■□□□□ 0.23
COMMD4-208ENST00000563220 TPRKBQ9Y3C4 175 aa16.48■□□□□ 0.23
COMMD4-208ENST00000563220 NSG1A0A0A6YYJ2 146 aa16.48■□□□□ 0.23
COMMD4-208ENST00000563220 H3BSA7 217 aa16.48■□□□□ 0.23
COMMD4-208ENST00000563220 ZNF701M0R085 212 aaPredicted RBP16.48■□□□□ 0.23
COMMD4-208ENST00000563220 FAM20BO75063 409 aa16.48■□□□□ 0.23
COMMD4-208ENST00000563220 OTX2P32243 289 aa16.48■□□□□ 0.23
COMMD4-208ENST00000563220 ST13P50502 369 aaKnown RBP16.48■□□□□ 0.23
COMMD4-208ENST00000563220 FXYD6P3P58550 94 aa16.48■□□□□ 0.23
COMMD4-208ENST00000563220 TEKQ02763 1124 aa16.48■□□□□ 0.23
COMMD4-208ENST00000563220 SSPNQ14714 243 aa16.48■□□□□ 0.23
COMMD4-208ENST00000563220 TOMM34Q15785 309 aaPredicted RBP16.48■□□□□ 0.23
COMMD4-208ENST00000563220 CLEC12AQ5QGZ9 265 aa16.48■□□□□ 0.23
COMMD4-208ENST00000563220 CASP12Q6UXS9 341 aa16.48■□□□□ 0.23
COMMD4-208ENST00000563220 ATG4DQ86TL0 474 aaPredicted RBP16.48■□□□□ 0.23
COMMD4-208ENST00000563220 SPARTQ8N0X7 666 aa16.48■□□□□ 0.23
COMMD4-208ENST00000563220 ESX1Q8N693 406 aa16.48■□□□□ 0.23
COMMD4-208ENST00000563220 ZNF540Q8NDQ6 660 aa16.48■□□□□ 0.23
COMMD4-208ENST00000563220 DUSP19Q8WTR2 217 aa16.48■□□□□ 0.23
COMMD4-208ENST00000563220 TMCO6Q96DC7 493 aa16.48■□□□□ 0.23
COMMD4-208ENST00000563220 RASL10BQ96S79 203 aa16.48■□□□□ 0.23
COMMD4-208ENST00000563220 TSSK6Q9BXA6 273 aa16.48■□□□□ 0.23
COMMD4-208ENST00000563220 IRF2BPLQ9H1B7 796 aa16.48■□□□□ 0.23
COMMD4-208ENST00000563220 TIMMDC1Q9NPL8 285 aa16.48■□□□□ 0.23
COMMD4-208ENST00000563220 ERVK-18Q9QC07 812 aa16.48■□□□□ 0.23
COMMD4-208ENST00000563220 IL20RAQ9UHF4 553 aa16.48■□□□□ 0.23
COMMD4-208ENST00000563220 C2orf72A6NCS6 295 aa16.47■□□□□ 0.23
COMMD4-208ENST00000563220 MPZL2O60487 215 aa16.47■□□□□ 0.23
COMMD4-208ENST00000563220 ITPKBP27987 946 aa16.47■□□□□ 0.23
COMMD4-208ENST00000563220 SLC6A8P48029 635 aa16.47■□□□□ 0.23
COMMD4-208ENST00000563220 SMSP52788 366 aa16.47■□□□□ 0.23
COMMD4-208ENST00000563220 NUDT6P53370 316 aa16.47■□□□□ 0.23
COMMD4-208ENST00000563220 SNRPGP62308 76 aaKnown RBP16.47■□□□□ 0.23
COMMD4-208ENST00000563220 RPS15P62841 145 aaKnown RBP16.47■□□□□ 0.23
COMMD4-208ENST00000563220 EFNB1P98172 346 aa16.47■□□□□ 0.23
COMMD4-208ENST00000563220 CRYZQ08257 329 aaKnown RBP16.47■□□□□ 0.23
COMMD4-208ENST00000563220 SLC27A4Q6P1M0 643 aa16.47■□□□□ 0.23
COMMD4-208ENST00000563220 NUP54Q7Z3B4 507 aa16.47■□□□□ 0.23
COMMD4-208ENST00000563220 MRGPREQ86SM8 312 aa16.47■□□□□ 0.23
COMMD4-208ENST00000563220 CDK20Q8IZL9 346 aa16.47■□□□□ 0.23
COMMD4-208ENST00000563220 TCEANCQ8N8B7 351 aa16.47■□□□□ 0.23
COMMD4-208ENST00000563220 NLGN4YQ8NFZ3 816 aaPredicted RBP16.47■□□□□ 0.23
COMMD4-208ENST00000563220 OR5W2Q8NH69 310 aa16.47■□□□□ 0.23
COMMD4-208ENST00000563220 ZNF563Q8TA94 476 aa16.47■□□□□ 0.23
COMMD4-208ENST00000563220 RNF138Q8WVD3 245 aa16.47■□□□□ 0.23
COMMD4-208ENST00000563220 SAMD8Q96LT4 415 aa16.47■□□□□ 0.23
COMMD4-208ENST00000563220 PLCXD1Q9NUJ7 323 aa16.47■□□□□ 0.23
COMMD4-208ENST00000563220 TMEM5Q9Y2B1 443 aa16.47■□□□□ 0.23
COMMD4-208ENST00000563220 CDH10Q9Y6N8 788 aa16.47■□□□□ 0.23
COMMD4-208ENST00000563220 SDK2Q58EX2 2172 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms