RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 OR2M3Q8NG83 312 aa14.14□□□□□ -0.15
USB1-208ENST00000563207 B4GALNT2Q8NHY0 566 aa14.14□□□□□ -0.15
USB1-208ENST00000563207 ZG16BQ96DA0 208 aa14.14□□□□□ -0.15
USB1-208ENST00000563207 TUBA1CQ9BQE3 449 aa14.14□□□□□ -0.15
USB1-208ENST00000563207 RTN4RQ9BZR6 473 aa14.14□□□□□ -0.15
USB1-208ENST00000563207 LAT2Q9GZY6 243 aa14.14□□□□□ -0.15
USB1-208ENST00000563207 DSN1Q9H410 356 aa14.14□□□□□ -0.15
USB1-208ENST00000563207 DNAJB12Q9NXW2 375 aaKnown RBP14.14□□□□□ -0.15
USB1-208ENST00000563207 A0A087WZY1 265 aa14.13□□□□□ -0.15
USB1-208ENST00000563207 SERPINB7O75635 380 aa14.13□□□□□ -0.15
USB1-208ENST00000563207 CSTAP01040 98 aa14.13□□□□□ -0.15
USB1-208ENST00000563207 UBL4AP11441 157 aa14.13□□□□□ -0.15
USB1-208ENST00000563207 PCGF2P35227 344 aa14.13□□□□□ -0.15
USB1-208ENST00000563207 GCKP35557 465 aa14.13□□□□□ -0.15
USB1-208ENST00000563207 TIMP3P35625 211 aa14.13□□□□□ -0.15
USB1-208ENST00000563207 GZMMP51124 257 aa14.13□□□□□ -0.15
USB1-208ENST00000563207 P2RX1P51575 399 aa14.13□□□□□ -0.15
USB1-208ENST00000563207 PSME3P61289 254 aa14.13□□□□□ -0.15
USB1-208ENST00000563207 SRYQ05066 204 aa14.13□□□□□ -0.15
USB1-208ENST00000563207 CD226Q15762 336 aa14.13□□□□□ -0.15
USB1-208ENST00000563207 MAPK14Q16539 360 aa14.13□□□□□ -0.15
USB1-208ENST00000563207 VMACQ2NL98 169 aa14.13□□□□□ -0.15
USB1-208ENST00000563207 LIN52Q52LA3 116 aa14.13□□□□□ -0.15
USB1-208ENST00000563207 C16orf89Q6UX73 402 aa14.13□□□□□ -0.15
USB1-208ENST00000563207 LACC1Q8IV20 430 aa14.13□□□□□ -0.15
USB1-208ENST00000563207 SLC15A3Q8IY34 581 aa14.13□□□□□ -0.15
USB1-208ENST00000563207 OR52P1PQ8NH57 321 aa14.13□□□□□ -0.15
USB1-208ENST00000563207 NFKBIDQ8NI38 313 aa14.13□□□□□ -0.15
USB1-208ENST00000563207 LINC01560Q8TB33 94 aa14.13□□□□□ -0.15
USB1-208ENST00000563207 WDR60Q8WVS4 1066 aa14.13□□□□□ -0.15
USB1-208ENST00000563207 SLC35B4Q969S0 331 aa14.13□□□□□ -0.15
USB1-208ENST00000563207 C1GALT1C1Q96EU7 318 aa14.13□□□□□ -0.15
USB1-208ENST00000563207 ZNF583Q96ND8 569 aa14.13□□□□□ -0.15
USB1-208ENST00000563207 OR2B2Q9GZK3 357 aa14.13□□□□□ -0.15
USB1-208ENST00000563207 SPAG4Q9NPE6 437 aa14.13□□□□□ -0.15
USB1-208ENST00000563207 EXOSC3Q9NQT5 275 aaKnown RBP14.13□□□□□ -0.15
USB1-208ENST00000563207 MED11Q9P086 117 aa14.13□□□□□ -0.15
USB1-208ENST00000563207 ABCD2Q9UBJ2 740 aa14.13□□□□□ -0.15
USB1-208ENST00000563207 GPC6Q9Y625 555 aaPredicted RBP14.13□□□□□ -0.15
USB1-208ENST00000563207 HEATR5AQ86XA9 2040 aa14.13□□□□□ -0.15
USB1-208ENST00000563207 MPDZO75970 2070 aa14.12□□□□□ -0.15
USB1-208ENST00000563207 PRORSD1PA6NEY8 169 aa14.12□□□□□ -0.15
USB1-208ENST00000563207 FAM220BPB1ANY3 271 aa14.12□□□□□ -0.15
USB1-208ENST00000563207 FAM47E-STBD1D6RA91 191 aa14.12□□□□□ -0.15
USB1-208ENST00000563207 LINC01387J3KSC0 135 aa14.12□□□□□ -0.15
USB1-208ENST00000563207 DVL2O14641 736 aa14.12□□□□□ -0.15
USB1-208ENST00000563207 HCRTR2O43614 444 aa14.12□□□□□ -0.15
USB1-208ENST00000563207 DPP4P27487 766 aa14.12□□□□□ -0.15
USB1-208ENST00000563207 PGM1P36871 562 aa14.12□□□□□ -0.15
USB1-208ENST00000563207 ASCL1P50553 236 aa14.12□□□□□ -0.15
USB1-208ENST00000563207 EEFSECP57772 596 aaKnown RBP14.12□□□□□ -0.15
USB1-208ENST00000563207 SPATS1Q496A3 300 aa14.12□□□□□ -0.15
USB1-208ENST00000563207 RNF220Q5VTB9 566 aa14.12□□□□□ -0.15
USB1-208ENST00000563207 OLIG3Q7RTU3 272 aa14.12□□□□□ -0.15
USB1-208ENST00000563207 PATL1Q86TB9 770 aaKnown RBP14.12□□□□□ -0.15
USB1-208ENST00000563207 GRAMD2AQ8IUY3 354 aa14.12□□□□□ -0.15
USB1-208ENST00000563207 ZNF440Q8IYI8 595 aa14.12□□□□□ -0.15
USB1-208ENST00000563207 PGAM4Q8N0Y7 254 aa14.12□□□□□ -0.15
USB1-208ENST00000563207 FAM71CQ8NEG0 241 aa14.12□□□□□ -0.15
USB1-208ENST00000563207 OR2T12Q8NG77 320 aa14.12□□□□□ -0.15
USB1-208ENST00000563207 RASSF5Q8WWW0 418 aa14.12□□□□□ -0.15
USB1-208ENST00000563207 ARSGQ96EG1 525 aa14.12□□□□□ -0.15
USB1-208ENST00000563207 POLDIP3Q9BY77 421 aaKnown RBP14.12□□□□□ -0.15
USB1-208ENST00000563207 EVA1AQ9H8M9 152 aa14.12□□□□□ -0.15
USB1-208ENST00000563207 CCM2LQ9NUG4 571 aaPredicted RBP14.12□□□□□ -0.15
USB1-208ENST00000563207 CMTM6Q9NX76 183 aa14.12□□□□□ -0.15
USB1-208ENST00000563207 DKKL1Q9UK85 242 aa14.12□□□□□ -0.15
USB1-208ENST00000563207 ZNF469Q96JG9 3925 aaPredicted RBP14.11□□□□□ -0.15
USB1-208ENST00000563207 ELOVL7A1L3X0 281 aa14.11□□□□□ -0.15
USB1-208ENST00000563207 FAM221AA4D161 298 aa14.11□□□□□ -0.15
USB1-208ENST00000563207 MBD3L4A6NDZ8 208 aaPredicted RBP14.11□□□□□ -0.15
USB1-208ENST00000563207 MBD3L3A6NE82 208 aaPredicted RBP14.11□□□□□ -0.15
USB1-208ENST00000563207 MBD3L5A6NJ08 208 aaPredicted RBP14.11□□□□□ -0.15
USB1-208ENST00000563207 CD8B2A6NJW9 211 aa14.11□□□□□ -0.15
USB1-208ENST00000563207 IL2RAP01589 272 aa14.11□□□□□ -0.15
USB1-208ENST00000563207 PABPC4LP0CB38 370 aaKnown RBP14.11□□□□□ -0.15
USB1-208ENST00000563207 SLC6A8P48029 635 aa14.11□□□□□ -0.15
USB1-208ENST00000563207 CPA2P48052 419 aa14.11□□□□□ -0.15
USB1-208ENST00000563207 PRRC2AP48634 2157 aaKnown RBP14.11□□□□□ -0.15
USB1-208ENST00000563207 ZNF41P51814 821 aaPredicted RBP14.11□□□□□ -0.15
USB1-208ENST00000563207 SLC7A2P52569 658 aa14.11□□□□□ -0.15
USB1-208ENST00000563207 PCBP3P57721 371 aaKnown RBP14.11□□□□□ -0.15
USB1-208ENST00000563207 MXRA7P84157 204 aa14.11□□□□□ -0.15
USB1-208ENST00000563207 ZNF117Q03924 483 aa14.11□□□□□ -0.15
USB1-208ENST00000563207 CBFBQ13951 182 aa14.11□□□□□ -0.15
USB1-208ENST00000563207 ZNF311Q5JNZ3 666 aa14.11□□□□□ -0.15
USB1-208ENST00000563207 CCDC80Q76M96 950 aa14.11□□□□□ -0.15
USB1-208ENST00000563207 PM20D2Q8IYS1 436 aa14.11□□□□□ -0.15
USB1-208ENST00000563207 GATSQ8NAP1 163 aa14.11□□□□□ -0.15
USB1-208ENST00000563207 OR5W2Q8NH69 310 aa14.11□□□□□ -0.15
USB1-208ENST00000563207 OR14L1PQ8NHC6 308 aa14.11□□□□□ -0.15
USB1-208ENST00000563207 MBD3L2Q8NHZ7 208 aaPredicted RBP14.11□□□□□ -0.15
USB1-208ENST00000563207 RNASE6Q93091 150 aaKnown RBP14.11□□□□□ -0.15
USB1-208ENST00000563207 ZBTB8AQ96BR9 441 aa14.11□□□□□ -0.15
USB1-208ENST00000563207 QRSL1Q9H0R6 528 aaKnown RBP14.11□□□□□ -0.15
USB1-208ENST00000563207 C1orf21Q9H246 121 aa14.11□□□□□ -0.15
USB1-208ENST00000563207 RASSF1Q9NS23 344 aa14.11□□□□□ -0.15
USB1-208ENST00000563207 TAS2R10Q9NYW0 307 aa14.11□□□□□ -0.15
USB1-208ENST00000563207 TMEM181Q9P2C4 612 aa14.11□□□□□ -0.15
USB1-208ENST00000563207 ZNF629Q9UEG4 869 aaPredicted RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms