RNA–Protein interactions for RNA: ENST00000561381.5

USP3-220, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 979 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-220ENST00000561381 ZNF300Q96RE9 604 aaPredicted RBP10.32□□□□□ -0.76
USP3-220ENST00000561381 MDFIQ99750 246 aa10.32□□□□□ -0.76
USP3-220ENST00000561381 PSD2Q9BQI7 771 aa10.32□□□□□ -0.76
USP3-220ENST00000561381 DUSP26Q9BV47 211 aa10.32□□□□□ -0.76
USP3-220ENST00000561381 HDHD5Q9BXW7 423 aa10.32□□□□□ -0.76
USP3-220ENST00000561381 BHLHE41Q9C0J9 482 aaPredicted RBP10.32□□□□□ -0.76
USP3-220ENST00000561381 ATAD3AQ9NVI7 634 aa10.32□□□□□ -0.76
USP3-220ENST00000561381 LGALS13Q9UHV8 139 aa10.32□□□□□ -0.76
USP3-220ENST00000561381 RNF115Q9Y4L5 304 aa10.32□□□□□ -0.76
USP3-220ENST00000561381 DPRXA6NFQ7 191 aa10.31□□□□□ -0.76
USP3-220ENST00000561381 SERINC4A6NH21 518 aa10.31□□□□□ -0.76
USP3-220ENST00000561381 OVOL3O00110 214 aa10.31□□□□□ -0.76
USP3-220ENST00000561381 SMAD9O15198 467 aaKnown RBP10.31□□□□□ -0.76
USP3-220ENST00000561381 ITM2AO43736 263 aa10.31□□□□□ -0.76
USP3-220ENST00000561381 FCMRO60667 390 aa10.31□□□□□ -0.76
USP3-220ENST00000561381 BCAS1O75363 584 aaPredicted RBP10.31□□□□□ -0.76
USP3-220ENST00000561381 LYZL6O75951 148 aa10.31□□□□□ -0.76
USP3-220ENST00000561381 BPGMP07738 259 aa10.31□□□□□ -0.76
USP3-220ENST00000561381 KRT16P08779 473 aa10.31□□□□□ -0.76
USP3-220ENST00000561381 NUDT17P0C025 328 aa10.31□□□□□ -0.76
USP3-220ENST00000561381 MATN1P21941 496 aa10.31□□□□□ -0.76
USP3-220ENST00000561381 SLC7A1P30825 629 aa10.31□□□□□ -0.76
USP3-220ENST00000561381 RAC3P60763 192 aa10.31□□□□□ -0.76
USP3-220ENST00000561381 KRTAP1-1Q07627 177 aa10.31□□□□□ -0.76
USP3-220ENST00000561381 ITGADQ13349 1161 aa10.31□□□□□ -0.76
USP3-220ENST00000561381 TIGD2Q4W5G0 525 aa10.31□□□□□ -0.76
USP3-220ENST00000561381 SLC25A53Q5H9E4 307 aa10.31□□□□□ -0.76
USP3-220ENST00000561381 OR4F3Q6IEY1 312 aa10.31□□□□□ -0.76
USP3-220ENST00000561381 ADAM5Q6NVV9 412 aa10.31□□□□□ -0.76
USP3-220ENST00000561381 BHLHA15Q7RTS1 189 aaPredicted RBP10.31□□□□□ -0.76
USP3-220ENST00000561381 C6orf120Q7Z4R8 191 aa10.31□□□□□ -0.76
USP3-220ENST00000561381 SLC43A2Q8N370 569 aa10.31□□□□□ -0.76
USP3-220ENST00000561381 RIBC1Q8N443 379 aaPredicted RBP10.31□□□□□ -0.76
USP3-220ENST00000561381 NATD1Q8N6N6 113 aa10.31□□□□□ -0.76
USP3-220ENST00000561381 TOR1AIP2Q8NFQ8 470 aa10.31□□□□□ -0.76
USP3-220ENST00000561381 KBTBD8Q8NFY9 601 aa10.31□□□□□ -0.76
USP3-220ENST00000561381 ZNF75CPQ92670 426 aaPredicted RBP10.31□□□□□ -0.76
USP3-220ENST00000561381 KISS1RQ969F8 398 aaPredicted RBP10.31□□□□□ -0.76
USP3-220ENST00000561381 OR5B2Q96R09 309 aa10.31□□□□□ -0.76
USP3-220ENST00000561381 PRPF18Q99633 342 aaKnown RBP10.31□□□□□ -0.76
USP3-220ENST00000561381 THUMPD3Q9BV44 507 aaKnown RBP10.31□□□□□ -0.76
USP3-220ENST00000561381 NMUR2Q9GZQ4 415 aa10.31□□□□□ -0.76
USP3-220ENST00000561381 L2HGDHQ9H9P8 463 aa10.31□□□□□ -0.76
USP3-220ENST00000561381 BCO1Q9HAY6 547 aa10.31□□□□□ -0.76
USP3-220ENST00000561381 GP6Q9HCN6 339 aa10.31□□□□□ -0.76
USP3-220ENST00000561381 ADAM21Q9UKJ8 722 aa10.31□□□□□ -0.76
USP3-220ENST00000561381 MKLN1Q9UL63 735 aa10.31□□□□□ -0.76
USP3-220ENST00000561381 RNF103-CHMP3A0A140T963 221 aa10.3□□□□□ -0.76
USP3-220ENST00000561381 ETV2O00321 342 aaPredicted RBP10.3□□□□□ -0.76
USP3-220ENST00000561381 EIF4E2O60573 245 aaKnown RBP10.3□□□□□ -0.76
USP3-220ENST00000561381 RAMP1O60894 148 aa10.3□□□□□ -0.76
USP3-220ENST00000561381 TMCC2O75069 709 aa10.3□□□□□ -0.76
USP3-220ENST00000561381 UGT2B17O75795 530 aa10.3□□□□□ -0.76
USP3-220ENST00000561381 SOX30O94993 753 aa10.3□□□□□ -0.76
USP3-220ENST00000561381 CD3EP07766 207 aa10.3□□□□□ -0.76
USP3-220ENST00000561381 DANCRP0C864 163 aa10.3□□□□□ -0.76
USP3-220ENST00000561381 UBTFL6P0CB48 400 aaPredicted RBP10.3□□□□□ -0.76
USP3-220ENST00000561381 SNRPBP14678 240 aaKnown RBP10.3□□□□□ -0.76
USP3-220ENST00000561381 SERPINB5P36952 375 aa10.3□□□□□ -0.76
USP3-220ENST00000561381 CDKN1AP38936 164 aa10.3□□□□□ -0.76
USP3-220ENST00000561381 ETV4P43268 484 aa10.3□□□□□ -0.76
USP3-220ENST00000561381 OR3A2P47893 321 aa10.3□□□□□ -0.76
USP3-220ENST00000561381 CLDN8P56748 225 aa10.3□□□□□ -0.76
USP3-220ENST00000561381 SESN3P58005 492 aa10.3□□□□□ -0.76
USP3-220ENST00000561381 C21orf58P58505 322 aa10.3□□□□□ -0.76
USP3-220ENST00000561381 VSNL1P62760 191 aa10.3□□□□□ -0.76
USP3-220ENST00000561381 PPP2R2BQ00005 443 aa10.3□□□□□ -0.76
USP3-220ENST00000561381 BSPH1Q075Z2 132 aa10.3□□□□□ -0.76
USP3-220ENST00000561381 RASGEF1BQ0VAM2 473 aa10.3□□□□□ -0.76
USP3-220ENST00000561381 SKP2Q13309 424 aa10.3□□□□□ -0.76
USP3-220ENST00000561381 CBFBQ13951 182 aa10.3□□□□□ -0.76
USP3-220ENST00000561381 VEZF1Q14119 521 aa10.3□□□□□ -0.76
USP3-220ENST00000561381 P2RY6Q15077 328 aa10.3□□□□□ -0.76
USP3-220ENST00000561381 STK11Q15831 433 aa10.3□□□□□ -0.76
USP3-220ENST00000561381 ZNF141Q15928 474 aa10.3□□□□□ -0.76
USP3-220ENST00000561381 PDCD2Q16342 344 aaPredicted RBP10.3□□□□□ -0.76
USP3-220ENST00000561381 MAPK14Q16539 360 aa10.3□□□□□ -0.76
USP3-220ENST00000561381 CLEC12BQ2HXU8 276 aa10.3□□□□□ -0.76
USP3-220ENST00000561381 PGGHGQ32M88 737 aa10.3□□□□□ -0.76
USP3-220ENST00000561381 LINC01559Q495D7 138 aa10.3□□□□□ -0.76
USP3-220ENST00000561381 ZNF672Q499Z4 452 aaPredicted RBP10.3□□□□□ -0.76
USP3-220ENST00000561381 C3orf33Q6P1S2 294 aa10.3□□□□□ -0.76
USP3-220ENST00000561381 HMGN2P46Q86SG4 172 aa10.3□□□□□ -0.76
USP3-220ENST00000561381 HOMEZQ8IX15 550 aa10.3□□□□□ -0.76
USP3-220ENST00000561381 PIWIL2Q8TC59 973 aaKnown RBP10.3□□□□□ -0.76
USP3-220ENST00000561381 SMAP2Q8WU79 429 aaPredicted RBP10.3□□□□□ -0.76
USP3-220ENST00000561381 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.3□□□□□ -0.76
USP3-220ENST00000561381 HSD17B8Q92506 261 aa10.3□□□□□ -0.76
USP3-220ENST00000561381 FBXW5Q969U6 566 aa10.3□□□□□ -0.76
USP3-220ENST00000561381 MOAP1Q96BY2 351 aa10.3□□□□□ -0.76
USP3-220ENST00000561381 DNAJA3Q96EY1 480 aa10.3□□□□□ -0.76
USP3-220ENST00000561381 PKNOX2Q96KN3 472 aa10.3□□□□□ -0.76
USP3-220ENST00000561381 POTEKPQ9BYX7 375 aa10.3□□□□□ -0.76
USP3-220ENST00000561381 LAT2Q9GZY6 243 aa10.3□□□□□ -0.76
USP3-220ENST00000561381 ESRP2Q9H6T0 727 aaKnown RBP10.3□□□□□ -0.76
USP3-220ENST00000561381 KLHL9Q9P2J3 617 aa10.3□□□□□ -0.76
USP3-220ENST00000561381 MAGED1Q9Y5V3 778 aaPredicted RBP10.3□□□□□ -0.76
USP3-220ENST00000561381 ANK3Q12955 4377 aaKnown RBP10.3□□□□□ -0.76
USP3-220ENST00000561381 SONP18583 2426 aaKnown RBP10.29□□□□□ -0.76
USP3-220ENST00000561381 ALPK2Q86TB3 2170 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms