RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 TBK1Q9UHD2 729 aa10.47□□□□□ -0.73
CARMIL3-204ENST00000561354 BAIAP2L1Q9UHR4 511 aa10.47□□□□□ -0.73
CARMIL3-204ENST00000561354 PRSS50Q9UI38 385 aa10.47□□□□□ -0.73
CARMIL3-204ENST00000561354 B3GALT5Q9Y2C3 310 aa10.47□□□□□ -0.73
CARMIL3-204ENST00000561354 CARD8Q9Y2G2 431 aa10.47□□□□□ -0.73
CARMIL3-204ENST00000561354 PTGDR2Q9Y5Y4 395 aa10.47□□□□□ -0.73
CARMIL3-204ENST00000561354 CADP27708 2225 aa10.47□□□□□ -0.73
CARMIL3-204ENST00000561354 ANK3Q12955 4377 aaKnown RBP10.47□□□□□ -0.73
CARMIL3-204ENST00000561354 STAB1Q9NY15 2570 aa10.46□□□□□ -0.73
CARMIL3-204ENST00000561354 A0A096LNT2 108 aa10.46□□□□□ -0.73
CARMIL3-204ENST00000561354 ZNF724A8MTY0 619 aa10.46□□□□□ -0.73
CARMIL3-204ENST00000561354 NPIPB9F8W1W9 429 aa10.46□□□□□ -0.73
CARMIL3-204ENST00000561354 ETV2O00321 342 aaPredicted RBP10.46□□□□□ -0.73
CARMIL3-204ENST00000561354 AZIN1O14977 448 aa10.46□□□□□ -0.73
CARMIL3-204ENST00000561354 LSM1O15116 133 aaKnown RBP10.46□□□□□ -0.73
CARMIL3-204ENST00000561354 SSX4O60224 188 aa10.46□□□□□ -0.73
CARMIL3-204ENST00000561354 PLIN3O60664 434 aa10.46□□□□□ -0.73
CARMIL3-204ENST00000561354 CYTIPO60759 359 aa10.46□□□□□ -0.73
CARMIL3-204ENST00000561354 LYZL6O75951 148 aa10.46□□□□□ -0.73
CARMIL3-204ENST00000561354 FAM157CP0CG43 387 aa10.46□□□□□ -0.73
CARMIL3-204ENST00000561354 CPA3P15088 417 aa10.46□□□□□ -0.73
CARMIL3-204ENST00000561354 GGT1P19440 569 aa10.46□□□□□ -0.73
CARMIL3-204ENST00000561354 COX5AP20674 150 aa10.46□□□□□ -0.73
CARMIL3-204ENST00000561354 SLC7A1P30825 629 aa10.46□□□□□ -0.73
CARMIL3-204ENST00000561354 CRHR1P34998 444 aa10.46□□□□□ -0.73
CARMIL3-204ENST00000561354 ATP12AP54707 1039 aa10.46□□□□□ -0.73
CARMIL3-204ENST00000561354 C21orf58P58505 322 aa10.46□□□□□ -0.73
CARMIL3-204ENST00000561354 DSCR9P59020 149 aa10.46□□□□□ -0.73
CARMIL3-204ENST00000561354 RPL38P63173 70 aaKnown RBP10.46□□□□□ -0.73
CARMIL3-204ENST00000561354 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.46□□□□□ -0.73
CARMIL3-204ENST00000561354 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.46□□□□□ -0.73
CARMIL3-204ENST00000561354 ATP6V1C2Q8NEY4 427 aa10.46□□□□□ -0.73
CARMIL3-204ENST00000561354 CLHC1Q8NHS4 586 aa10.46□□□□□ -0.73
CARMIL3-204ENST00000561354 PSMA8Q8TAA3 256 aa10.46□□□□□ -0.73
CARMIL3-204ENST00000561354 CCT8L2Q96SF2 557 aa10.46□□□□□ -0.73
CARMIL3-204ENST00000561354 ACTRT3Q9BYD9 372 aa10.46□□□□□ -0.73
CARMIL3-204ENST00000561354 TUBB1Q9H4B7 451 aa10.46□□□□□ -0.73
CARMIL3-204ENST00000561354 ATP6V1HQ9UI12 483 aa10.46□□□□□ -0.73
CARMIL3-204ENST00000561354 DTNAQ9Y4J8 743 aa10.46□□□□□ -0.73
CARMIL3-204ENST00000561354 IGHV4-30-2A0A087WSY4 118 aa10.45□□□□□ -0.74
CARMIL3-204ENST00000561354 IGHV3-15A0A0B4J1V0 119 aa10.45□□□□□ -0.74
CARMIL3-204ENST00000561354 A0A1W2PNR3 127 aa10.45□□□□□ -0.74
CARMIL3-204ENST00000561354 OR5H1A6NKK0 313 aa10.45□□□□□ -0.74
CARMIL3-204ENST00000561354 ELOA3DA6NLF2 546 aaPredicted RBP10.45□□□□□ -0.74
CARMIL3-204ENST00000561354 GTPBP1O00178 669 aaKnown RBP10.45□□□□□ -0.74
CARMIL3-204ENST00000561354 ABCD4O14678 606 aa10.45□□□□□ -0.74
CARMIL3-204ENST00000561354 SMAD9O15198 467 aaKnown RBP10.45□□□□□ -0.74
CARMIL3-204ENST00000561354 TM9SF1O15321 606 aa10.45□□□□□ -0.74
CARMIL3-204ENST00000561354 ZNF264O43296 627 aa10.45□□□□□ -0.74
CARMIL3-204ENST00000561354 GPRIN2O60269 458 aa10.45□□□□□ -0.74
CARMIL3-204ENST00000561354 EIF4E2O60573 245 aaKnown RBP10.45□□□□□ -0.74
CARMIL3-204ENST00000561354 DNAJA2O60884 412 aa10.45□□□□□ -0.74
CARMIL3-204ENST00000561354 CHEK2O96017 543 aa10.45□□□□□ -0.74
CARMIL3-204ENST00000561354 FGF4P08620 206 aa10.45□□□□□ -0.74
CARMIL3-204ENST00000561354 KRT16P08779 473 aa10.45□□□□□ -0.74
CARMIL3-204ENST00000561354 LINC00032P0C843 101 aa10.45□□□□□ -0.74
CARMIL3-204ENST00000561354 BCKDHAP12694 445 aa10.45□□□□□ -0.74
CARMIL3-204ENST00000561354 EFNA1P20827 205 aaPredicted RBP10.45□□□□□ -0.74
CARMIL3-204ENST00000561354 IGHV1-2P23083 117 aa10.45□□□□□ -0.74
CARMIL3-204ENST00000561354 TTKP33981 857 aa10.45□□□□□ -0.74
CARMIL3-204ENST00000561354 RPL3P39023 403 aaKnown RBP10.45□□□□□ -0.74
CARMIL3-204ENST00000561354 CCT3P49368 545 aaKnown RBP10.45□□□□□ -0.74
CARMIL3-204ENST00000561354 CDH11P55287 796 aa10.45□□□□□ -0.74
CARMIL3-204ENST00000561354 LOXL1Q08397 574 aaPredicted RBP10.45□□□□□ -0.74
CARMIL3-204ENST00000561354 RASGEF1BQ0VAM2 473 aa10.45□□□□□ -0.74
CARMIL3-204ENST00000561354 STK11Q15831 433 aa10.45□□□□□ -0.74
CARMIL3-204ENST00000561354 ELOA3BQ3SY89 546 aa10.45□□□□□ -0.74
CARMIL3-204ENST00000561354 ARL13AQ5H913 290 aaPredicted RBP10.45□□□□□ -0.74
CARMIL3-204ENST00000561354 DCST2Q5T1A1 773 aa10.45□□□□□ -0.74
CARMIL3-204ENST00000561354 C6orf52Q5T4I8 152 aa10.45□□□□□ -0.74
CARMIL3-204ENST00000561354 GKAP1Q5VSY0 366 aaPredicted RBP10.45□□□□□ -0.74
CARMIL3-204ENST00000561354 LIPMQ5VYY2 423 aa10.45□□□□□ -0.74
CARMIL3-204ENST00000561354 KANK2Q63ZY3 851 aa10.45□□□□□ -0.74
CARMIL3-204ENST00000561354 NATD1Q8N6N6 113 aa10.45□□□□□ -0.74
CARMIL3-204ENST00000561354 TOR1AIP2Q8NFQ8 470 aa10.45□□□□□ -0.74
CARMIL3-204ENST00000561354 ELOA3Q8NG57 546 aa10.45□□□□□ -0.74
CARMIL3-204ENST00000561354 OR56A1Q8NGH5 318 aa10.45□□□□□ -0.74
CARMIL3-204ENST00000561354 OR5W2Q8NH69 310 aa10.45□□□□□ -0.74
CARMIL3-204ENST00000561354 ADAMTS15Q8TE58 950 aa10.45□□□□□ -0.74
CARMIL3-204ENST00000561354 ZNF75CPQ92670 426 aaPredicted RBP10.45□□□□□ -0.74
CARMIL3-204ENST00000561354 ZNF524Q96C55 264 aa10.45□□□□□ -0.74
CARMIL3-204ENST00000561354 ADAD1Q96M93 576 aaKnown RBP10.45□□□□□ -0.74
CARMIL3-204ENST00000561354 TNFRSF13CQ96RJ3 184 aa10.45□□□□□ -0.74
CARMIL3-204ENST00000561354 TRMOQ9BU70 441 aa10.45□□□□□ -0.74
CARMIL3-204ENST00000561354 KCNK9Q9NPC2 374 aa10.45□□□□□ -0.74
CARMIL3-204ENST00000561354 CBLN4Q9NTU7 201 aa10.45□□□□□ -0.74
CARMIL3-204ENST00000561354 GPATCH2Q9NW75 528 aa10.45□□□□□ -0.74
CARMIL3-204ENST00000561354 TMEM160Q9NX00 188 aa10.45□□□□□ -0.74
CARMIL3-204ENST00000561354 NPAP1Q9NZP6 1156 aa10.45□□□□□ -0.74
CARMIL3-204ENST00000561354 CDC42EP3Q9UKI2 254 aa10.45□□□□□ -0.74
CARMIL3-204ENST00000561354 FAF1Q9UNN5 650 aaPredicted RBP10.45□□□□□ -0.74
CARMIL3-204ENST00000561354 MGAT4BQ9UQ53 548 aa10.45□□□□□ -0.74
CARMIL3-204ENST00000561354 DNAJC15Q9Y5T4 150 aa10.45□□□□□ -0.74
CARMIL3-204ENST00000561354 NPIPA5A0A0B4J1W7 369 aa10.44□□□□□ -0.74
CARMIL3-204ENST00000561354 TMEM114B3SHH9 223 aa10.44□□□□□ -0.74
CARMIL3-204ENST00000561354 NPIPA7E9PJI5 369 aa10.44□□□□□ -0.74
CARMIL3-204ENST00000561354 SCAMP2O15127 329 aaKnown RBP10.44□□□□□ -0.74
CARMIL3-204ENST00000561354 PHF1O43189 567 aaPredicted RBP10.44□□□□□ -0.74
CARMIL3-204ENST00000561354 F12P00748 615 aaPredicted RBP10.44□□□□□ -0.74
CARMIL3-204ENST00000561354 NPIPA8P0DM63 369 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms