RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 KLHL14Q9P2G3 628 aa9.1□□□□□ -0.95
HERC1-212ENST00000561348 CLCF1Q9UBD9 225 aa9.1□□□□□ -0.95
HERC1-212ENST00000561348 SLC13A4Q9UKG4 626 aa9.1□□□□□ -0.95
HERC1-212ENST00000561348 ZNF443Q9Y2A4 671 aaPredicted RBP9.1□□□□□ -0.95
HERC1-212ENST00000561348 CAPN7Q9Y6W3 813 aa9.1□□□□□ -0.95
HERC1-212ENST00000561348 INTS1Q8N201 2190 aaKnown RBP9.1□□□□□ -0.95
HERC1-212ENST00000561348 DOCK7Q96N67 2140 aa9.1□□□□□ -0.95
HERC1-212ENST00000561348 A0A0G2JPF8 293 aa9.09□□□□□ -0.95
HERC1-212ENST00000561348 CFAP73A6NFT4 308 aa9.09□□□□□ -0.95
HERC1-212ENST00000561348 GJE1A6NN92 205 aa9.09□□□□□ -0.95
HERC1-212ENST00000561348 HNRNPCL2B2RXH8 293 aa9.09□□□□□ -0.95
HERC1-212ENST00000561348 HNRNPCL3B7ZW38 293 aa9.09□□□□□ -0.95
HERC1-212ENST00000561348 MRASO14807 208 aa9.09□□□□□ -0.95
HERC1-212ENST00000561348 RRP9O43818 475 aaKnown RBP9.09□□□□□ -0.95
HERC1-212ENST00000561348 EFNA2O43921 213 aa9.09□□□□□ -0.95
HERC1-212ENST00000561348 HNRNPCL1O60812 293 aaKnown RBP9.09□□□□□ -0.95
HERC1-212ENST00000561348 AQP8O94778 261 aa9.09□□□□□ -0.95
HERC1-212ENST00000561348 RCBTB2O95199 551 aa9.09□□□□□ -0.95
HERC1-212ENST00000561348 HNRNPCL4P0DMR1 293 aa9.09□□□□□ -0.95
HERC1-212ENST00000561348 NID1P14543 1247 aa9.09□□□□□ -0.95
HERC1-212ENST00000561348 UQCRBP14927 111 aa9.09□□□□□ -0.95
HERC1-212ENST00000561348 SLC6A8P48029 635 aa9.09□□□□□ -0.95
HERC1-212ENST00000561348 MRPL19P49406 292 aaKnown RBP9.09□□□□□ -0.95
HERC1-212ENST00000561348 ASCL1P50553 236 aa9.09□□□□□ -0.95
HERC1-212ENST00000561348 COPZ1P61923 177 aa9.09□□□□□ -0.95
HERC1-212ENST00000561348 IRX1P78414 480 aaPredicted RBP9.09□□□□□ -0.95
HERC1-212ENST00000561348 HOXC5Q00444 222 aa9.09□□□□□ -0.95
HERC1-212ENST00000561348 CDK6Q00534 326 aa9.09□□□□□ -0.95
HERC1-212ENST00000561348 FADDQ13158 208 aa9.09□□□□□ -0.95
HERC1-212ENST00000561348 CYLC2Q14093 348 aaPredicted RBP9.09□□□□□ -0.95
HERC1-212ENST00000561348 SCARB2Q14108 478 aa9.09□□□□□ -0.95
HERC1-212ENST00000561348 SELPLGQ14242 412 aa9.09□□□□□ -0.95
HERC1-212ENST00000561348 MAPRE2Q15555 327 aa9.09□□□□□ -0.95
HERC1-212ENST00000561348 TMEM44Q2T9K0 475 aa9.09□□□□□ -0.95
HERC1-212ENST00000561348 LIN52Q52LA3 116 aa9.09□□□□□ -0.95
HERC1-212ENST00000561348 LRIF1Q5T3J3 769 aa9.09□□□□□ -0.95
HERC1-212ENST00000561348 FBXW10Q5XX13 1052 aa9.09□□□□□ -0.95
HERC1-212ENST00000561348 REP15Q6BDI9 236 aa9.09□□□□□ -0.95
HERC1-212ENST00000561348 OR2A2Q6IF42 318 aa9.09□□□□□ -0.95
HERC1-212ENST00000561348 ALKBH2Q6NS38 261 aa9.09□□□□□ -0.95
HERC1-212ENST00000561348 VWA1Q6PCB0 445 aa9.09□□□□□ -0.95
HERC1-212ENST00000561348 ESPNLQ6ZVH7 1005 aa9.09□□□□□ -0.95
HERC1-212ENST00000561348 KRT73Q86Y46 540 aa9.09□□□□□ -0.95
HERC1-212ENST00000561348 C10orf111Q8N326 155 aa9.09□□□□□ -0.95
HERC1-212ENST00000561348 ZNF775Q96BV0 537 aaPredicted RBP9.09□□□□□ -0.95
HERC1-212ENST00000561348 ZNF524Q96C55 264 aa9.09□□□□□ -0.95
HERC1-212ENST00000561348 MRGPRX4Q96LA9 322 aa9.09□□□□□ -0.95
HERC1-212ENST00000561348 CGREF1Q99674 301 aa9.09□□□□□ -0.95
HERC1-212ENST00000561348 RBM24Q9BX46 236 aaKnown RBP9.09□□□□□ -0.95
HERC1-212ENST00000561348 SAP130Q9H0E3 1048 aa9.09□□□□□ -0.95
HERC1-212ENST00000561348 NSRP1Q9H0G5 558 aaKnown RBP9.09□□□□□ -0.95
HERC1-212ENST00000561348 IKZF5Q9H5V7 419 aa9.09□□□□□ -0.95
HERC1-212ENST00000561348 ZNF385DQ9H6B1 395 aa9.09□□□□□ -0.95
HERC1-212ENST00000561348 CCDC134Q9H6E4 229 aa9.09□□□□□ -0.95
HERC1-212ENST00000561348 ARMC7Q9H6L4 198 aa9.09□□□□□ -0.95
HERC1-212ENST00000561348 C12orf49Q9H741 205 aa9.09□□□□□ -0.95
HERC1-212ENST00000561348 A4GALTQ9NPC4 353 aa9.09□□□□□ -0.95
HERC1-212ENST00000561348 SLC52A3Q9NQ40 469 aa9.09□□□□□ -0.95
HERC1-212ENST00000561348 TIGARQ9NQ88 270 aa9.09□□□□□ -0.95
HERC1-212ENST00000561348 NPDC1Q9NQX5 325 aaPredicted RBP9.09□□□□□ -0.95
HERC1-212ENST00000561348 ACER3Q9NUN7 267 aa9.09□□□□□ -0.95
HERC1-212ENST00000561348 DNAJB12Q9NXW2 375 aaKnown RBP9.09□□□□□ -0.95
HERC1-212ENST00000561348 ZNF629Q9UEG4 869 aaPredicted RBP9.09□□□□□ -0.95
HERC1-212ENST00000561348 CORO2BQ9UQ03 480 aa9.09□□□□□ -0.95
HERC1-212ENST00000561348 MED12LQ86YW9 2145 aa9.08□□□□□ -0.96
HERC1-212ENST00000561348 A0A1W2PNV4 684 aa9.08□□□□□ -0.96
HERC1-212ENST00000561348 SULT2B1O00204 365 aa9.08□□□□□ -0.96
HERC1-212ENST00000561348 PGM3O95394 542 aa9.08□□□□□ -0.96
HERC1-212ENST00000561348 CXCR1P25024 350 aa9.08□□□□□ -0.96
HERC1-212ENST00000561348 PSMA4P25789 261 aaKnown RBP9.08□□□□□ -0.96
HERC1-212ENST00000561348 TACR3P29371 465 aa9.08□□□□□ -0.96
HERC1-212ENST00000561348 MAGEA8P43361 318 aa9.08□□□□□ -0.96
HERC1-212ENST00000561348 FOXD4Q12950 439 aaPredicted RBP9.08□□□□□ -0.96
HERC1-212ENST00000561348 SELENBP1Q13228 472 aa9.08□□□□□ -0.96
HERC1-212ENST00000561348 MAPK11Q15759 364 aa9.08□□□□□ -0.96
HERC1-212ENST00000561348 RUNDC3AQ59EK9 446 aa9.08□□□□□ -0.96
HERC1-212ENST00000561348 REEP3Q6NUK4 255 aa9.08□□□□□ -0.96
HERC1-212ENST00000561348 C3orf33Q6P1S2 294 aa9.08□□□□□ -0.96
HERC1-212ENST00000561348 DLEU7Q6UYE1 221 aa9.08□□□□□ -0.96
HERC1-212ENST00000561348 PLEKHM3Q6ZWE6 761 aa9.08□□□□□ -0.96
HERC1-212ENST00000561348 SPATA21Q7Z572 469 aa9.08□□□□□ -0.96
HERC1-212ENST00000561348 TMEM200AQ86VY9 491 aa9.08□□□□□ -0.96
HERC1-212ENST00000561348 ZZZ3Q8IYH5 903 aa9.08□□□□□ -0.96
HERC1-212ENST00000561348 CLIP4Q8N3C7 705 aa9.08□□□□□ -0.96
HERC1-212ENST00000561348 METTL25Q8N6Q8 603 aa9.08□□□□□ -0.96
HERC1-212ENST00000561348 OR10A6Q8NH74 314 aa9.08□□□□□ -0.96
HERC1-212ENST00000561348 BBS10Q8TAM1 723 aa9.08□□□□□ -0.96
HERC1-212ENST00000561348 SLC26A7Q8TE54 656 aa9.08□□□□□ -0.96
HERC1-212ENST00000561348 C10orf82Q8WW14 230 aa9.08□□□□□ -0.96
HERC1-212ENST00000561348 ST8SIA1Q92185 356 aa9.08□□□□□ -0.96
HERC1-212ENST00000561348 ANKRD27Q96NW4 1050 aa9.08□□□□□ -0.96
HERC1-212ENST00000561348 ZNF317Q96PQ6 595 aaPredicted RBP9.08□□□□□ -0.96
HERC1-212ENST00000561348 ECSITQ9BQ95 431 aa9.08□□□□□ -0.96
HERC1-212ENST00000561348 ZNF559Q9BR84 538 aa9.08□□□□□ -0.96
HERC1-212ENST00000561348 CPPED1Q9BRF8 314 aaPredicted RBP9.08□□□□□ -0.96
HERC1-212ENST00000561348 SFXN3Q9BWM7 321 aa9.08□□□□□ -0.96
HERC1-212ENST00000561348 SRXN1Q9BYN0 137 aa9.08□□□□□ -0.96
HERC1-212ENST00000561348 OR11A1Q9GZK7 315 aa9.08□□□□□ -0.96
HERC1-212ENST00000561348 OPN3Q9H1Y3 402 aaPredicted RBP9.08□□□□□ -0.96
HERC1-212ENST00000561348 TMEM45AQ9NWC5 275 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms