RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 ANKUB1A6NFN9 424 aa9.4□□□□□ -0.9
USP3-219ENST00000561326 OIP5O43482 229 aa9.4□□□□□ -0.9
USP3-219ENST00000561326 CDC40O60508 579 aaKnown RBP eCLIP9.4□□□□□ -0.9
USP3-219ENST00000561326 THY1P04216 161 aa9.4□□□□□ -0.9
USP3-219ENST00000561326 P04436 131 aa9.4□□□□□ -0.9
USP3-219ENST00000561326 OSMP13725 252 aa9.4□□□□□ -0.9
USP3-219ENST00000561326 MYF6P23409 242 aa9.4□□□□□ -0.9
USP3-219ENST00000561326 ZNF41P51814 821 aaPredicted RBP9.4□□□□□ -0.9
USP3-219ENST00000561326 GAS1P54826 345 aa9.4□□□□□ -0.9
USP3-219ENST00000561326 SOX8P57073 446 aa9.4□□□□□ -0.9
USP3-219ENST00000561326 ALDH6A1Q02252 535 aaKnown RBP9.4□□□□□ -0.9
USP3-219ENST00000561326 OC90Q02509 493 aaPredicted RBP9.4□□□□□ -0.9
USP3-219ENST00000561326 PRKCDQ05655 676 aa9.4□□□□□ -0.9
USP3-219ENST00000561326 TSPAN31Q12999 210 aa9.4□□□□□ -0.9
USP3-219ENST00000561326 PDK3Q15120 406 aa9.4□□□□□ -0.9
USP3-219ENST00000561326 COL28A1Q2UY09 1125 aa9.4□□□□□ -0.9
USP3-219ENST00000561326 ANKRD34AQ69YU3 496 aa9.4□□□□□ -0.9
USP3-219ENST00000561326 LINC00114Q6XXX2 140 aa9.4□□□□□ -0.9
USP3-219ENST00000561326 PRICKLE2Q7Z3G6 844 aa9.4□□□□□ -0.9
USP3-219ENST00000561326 ZER1Q7Z7L7 766 aa9.4□□□□□ -0.9
USP3-219ENST00000561326 NRMQ8IXM6 262 aa9.4□□□□□ -0.9
USP3-219ENST00000561326 C8orf59Q8N0T1 100 aaPredicted RBP9.4□□□□□ -0.9
USP3-219ENST00000561326 CYP4Z2PQ8N1L4 340 aa9.4□□□□□ -0.9
USP3-219ENST00000561326 ZNF248Q8NDW4 579 aa9.4□□□□□ -0.9
USP3-219ENST00000561326 GPR119Q8TDV5 335 aa9.4□□□□□ -0.9
USP3-219ENST00000561326 PAQR8Q8TEZ7 354 aa9.4□□□□□ -0.9
USP3-219ENST00000561326 TMEM255BQ8WV15 326 aa9.4□□□□□ -0.9
USP3-219ENST00000561326 ST8SIA1Q92185 356 aa9.4□□□□□ -0.9
USP3-219ENST00000561326 PSMF1Q92530 271 aa9.4□□□□□ -0.9
USP3-219ENST00000561326 NIPSNAP1Q9BPW8 284 aa9.4□□□□□ -0.9
USP3-219ENST00000561326 PRSS27Q9BQR3 290 aa9.4□□□□□ -0.9
USP3-219ENST00000561326 UTP23Q9BRU9 249 aaKnown RBP9.4□□□□□ -0.9
USP3-219ENST00000561326 TEX12Q9BXU0 123 aa9.4□□□□□ -0.9
USP3-219ENST00000561326 GABARAPL3Q9BY60 117 aa9.4□□□□□ -0.9
USP3-219ENST00000561326 ANGPTL4Q9BY76 406 aa9.4□□□□□ -0.9
USP3-219ENST00000561326 DPH1Q9BZG8 443 aa9.4□□□□□ -0.9
USP3-219ENST00000561326 RTN4RQ9BZR6 473 aa9.4□□□□□ -0.9
USP3-219ENST00000561326 SLC19A3Q9BZV2 496 aa9.4□□□□□ -0.9
USP3-219ENST00000561326 ADAM19Q9H013 955 aa9.4□□□□□ -0.9
USP3-219ENST00000561326 SACM1LQ9NTJ5 587 aa9.4□□□□□ -0.9
USP3-219ENST00000561326 KLK13Q9UKR3 277 aa9.4□□□□□ -0.9
USP3-219ENST00000561326 GMPPBQ9Y5P6 360 aa9.4□□□□□ -0.9
USP3-219ENST00000561326 WIF1Q9Y5W5 379 aa9.4□□□□□ -0.9
USP3-219ENST00000561326 CHCHD2Q9Y6H1 151 aaPredicted RBP9.4□□□□□ -0.9
USP3-219ENST00000561326 SPTBN2O15020 2390 aa9.39□□□□□ -0.91
USP3-219ENST00000561326 PCSK5Q92824 1860 aa9.39□□□□□ -0.91
USP3-219ENST00000561326 IGLV3-32A0A0A0MS00 114 aa9.39□□□□□ -0.91
USP3-219ENST00000561326 C2orf72A6NCS6 295 aa9.39□□□□□ -0.91
USP3-219ENST00000561326 ARGFXA6NJG6 315 aa9.39□□□□□ -0.91
USP3-219ENST00000561326 H3BN98 237 aa9.39□□□□□ -0.91
USP3-219ENST00000561326 MASP2O00187 686 aa9.39□□□□□ -0.91
USP3-219ENST00000561326 BCKDKO14874 412 aa9.39□□□□□ -0.91
USP3-219ENST00000561326 MITFO75030 526 aaPredicted RBP9.39□□□□□ -0.91
USP3-219ENST00000561326 ADAM11O75078 769 aa9.39□□□□□ -0.91
USP3-219ENST00000561326 SLC25A12O75746 678 aa9.39□□□□□ -0.91
USP3-219ENST00000561326 LYPD3O95274 346 aa9.39□□□□□ -0.91
USP3-219ENST00000561326 RPSAP08865 295 aaKnown RBP9.39□□□□□ -0.91
USP3-219ENST00000561326 IFI30P13284 250 aa9.39□□□□□ -0.91
USP3-219ENST00000561326 FUT4P22083 530 aa9.39□□□□□ -0.91
USP3-219ENST00000561326 POLR2HP52434 150 aaKnown RBP9.39□□□□□ -0.91
USP3-219ENST00000561326 MAP2K6P52564 334 aa9.39□□□□□ -0.91
USP3-219ENST00000561326 CRISP1P54107 249 aa9.39□□□□□ -0.91
USP3-219ENST00000561326 CTBP2P56545 445 aa9.39□□□□□ -0.91
USP3-219ENST00000561326 CLN3Q13286 438 aa9.39□□□□□ -0.91
USP3-219ENST00000561326 KEAP1Q14145 624 aa9.39□□□□□ -0.91
USP3-219ENST00000561326 QPRTQ15274 297 aa9.39□□□□□ -0.91
USP3-219ENST00000561326 AGAP7PQ5VUJ5 663 aa9.39□□□□□ -0.91
USP3-219ENST00000561326 B3GNTL1Q67FW5 361 aaPredicted RBP9.39□□□□□ -0.91
USP3-219ENST00000561326 OR5M10Q6IEU7 315 aa9.39□□□□□ -0.91
USP3-219ENST00000561326 RPL13AP3Q6NVV1 102 aa9.39□□□□□ -0.91
USP3-219ENST00000561326 KLHL17Q6TDP4 642 aa9.39□□□□□ -0.91
USP3-219ENST00000561326 TMPRSS11FQ6ZWK6 438 aa9.39□□□□□ -0.91
USP3-219ENST00000561326 GRINAQ7Z429 371 aa9.39□□□□□ -0.91
USP3-219ENST00000561326 THAP5Q7Z6K1 395 aa9.39□□□□□ -0.91
USP3-219ENST00000561326 GALNT16Q8N428 558 aa9.39□□□□□ -0.91
USP3-219ENST00000561326 OR4K17Q8NGC6 315 aa9.39□□□□□ -0.91
USP3-219ENST00000561326 KCNE4Q8WWG9 221 aa9.39□□□□□ -0.91
USP3-219ENST00000561326 OSTF1Q92882 214 aa9.39□□□□□ -0.91
USP3-219ENST00000561326 C3orf49Q96BT1 292 aa9.39□□□□□ -0.91
USP3-219ENST00000561326 BPIFA2Q96DR5 249 aa9.39□□□□□ -0.91
USP3-219ENST00000561326 HRASLS5Q96KN8 279 aa9.39□□□□□ -0.91
USP3-219ENST00000561326 FRMD6Q96NE9 622 aa9.39□□□□□ -0.91
USP3-219ENST00000561326 AGAP4Q96P64 663 aa9.39□□□□□ -0.91
USP3-219ENST00000561326 MBOAT4Q96T53 435 aa9.39□□□□□ -0.91
USP3-219ENST00000561326 TMEM43Q9BTV4 400 aa9.39□□□□□ -0.91
USP3-219ENST00000561326 SCNM1Q9BWG6 230 aa9.39□□□□□ -0.91
USP3-219ENST00000561326 GRIP2Q9C0E4 1043 aa9.39□□□□□ -0.91
USP3-219ENST00000561326 ING2Q9H160 280 aa9.39□□□□□ -0.91
USP3-219ENST00000561326 GALNT9Q9HCQ5 603 aa9.39□□□□□ -0.91
USP3-219ENST00000561326 TIMMDC1Q9NPL8 285 aa9.39□□□□□ -0.91
USP3-219ENST00000561326 TAS2R10Q9NYW0 307 aa9.39□□□□□ -0.91
USP3-219ENST00000561326 MED11Q9P086 117 aa9.39□□□□□ -0.91
USP3-219ENST00000561326 MSRB2Q9Y3D2 182 aa9.39□□□□□ -0.91
USP3-219ENST00000561326 HSPE1-MOB4S4R3N1 261 aa9.39□□□□□ -0.91
USP3-219ENST00000561326 SPTBN4Q9H254 2564 aa9.38□□□□□ -0.91
USP3-219ENST00000561326 UNC119BA6NIH7 251 aa9.38□□□□□ -0.91
USP3-219ENST00000561326 NKX2-8O15522 239 aa9.38□□□□□ -0.91
USP3-219ENST00000561326 GMFGO60234 142 aa9.38□□□□□ -0.91
USP3-219ENST00000561326 MAN1A2O60476 641 aa9.38□□□□□ -0.91
USP3-219ENST00000561326 RCBTB2O95199 551 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms