RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 IGHV3-15A0A0B4J1V0 119 aa14.4□□□□□ -0.1
SNX1-213ENST00000561026 PRSS51A0A1B0GVH4 220 aa14.4□□□□□ -0.1
SNX1-213ENST00000561026 TRIM64A6NGJ6 449 aa14.4□□□□□ -0.1
SNX1-213ENST00000561026 TRIM64BA6NI03 449 aa14.4□□□□□ -0.1
SNX1-213ENST00000561026 ZNF814B7Z6K7 855 aa14.4□□□□□ -0.1
SNX1-213ENST00000561026 RGS16O15492 202 aaPredicted RBP14.4□□□□□ -0.1
SNX1-213ENST00000561026 TMCC2O75069 709 aa14.4□□□□□ -0.1
SNX1-213ENST00000561026 CYP7B1O75881 506 aa14.4□□□□□ -0.1
SNX1-213ENST00000561026 SNUPNO95149 360 aaKnown RBP14.4□□□□□ -0.1
SNX1-213ENST00000561026 ADAP00813 363 aa14.4□□□□□ -0.1
SNX1-213ENST00000561026 CSTAP01040 98 aa14.4□□□□□ -0.1
SNX1-213ENST00000561026 GUSBP08236 651 aa14.4□□□□□ -0.1
SNX1-213ENST00000561026 DHRS4L1P0CG22 281 aa14.4□□□□□ -0.1
SNX1-213ENST00000561026 IL32P24001 234 aa14.4□□□□□ -0.1
SNX1-213ENST00000561026 RPL14P50914 215 aaKnown RBP14.4□□□□□ -0.1
SNX1-213ENST00000561026 CASP9P55211 416 aa14.4□□□□□ -0.1
SNX1-213ENST00000561026 SESN3P58005 492 aa14.4□□□□□ -0.1
SNX1-213ENST00000561026 PHC1P78364 1004 aa14.4□□□□□ -0.1
SNX1-213ENST00000561026 TAB1Q15750 504 aa14.4□□□□□ -0.1
SNX1-213ENST00000561026 AP1ARQ63HQ0 302 aa14.4□□□□□ -0.1
SNX1-213ENST00000561026 C3orf33Q6P1S2 294 aa14.4□□□□□ -0.1
SNX1-213ENST00000561026 OLIG3Q7RTU3 272 aa14.4□□□□□ -0.1
SNX1-213ENST00000561026 C16orf62Q7Z3J2 963 aa14.4□□□□□ -0.1
SNX1-213ENST00000561026 RAB3IL1Q8TBN0 382 aa14.4□□□□□ -0.1
SNX1-213ENST00000561026 ST8SIA1Q92185 356 aa14.4□□□□□ -0.1
SNX1-213ENST00000561026 HSD17B8Q92506 261 aa14.4□□□□□ -0.1
SNX1-213ENST00000561026 AKAP1Q92667 903 aaKnown RBP eCLIP14.4□□□□□ -0.1
SNX1-213ENST00000561026 KISS1RQ969F8 398 aaPredicted RBP14.4□□□□□ -0.1
SNX1-213ENST00000561026 OR5B2Q96R09 309 aa14.4□□□□□ -0.1
SNX1-213ENST00000561026 USB1Q9BQ65 265 aaKnown RBP14.4□□□□□ -0.1
SNX1-213ENST00000561026 PSD2Q9BQI7 771 aa14.4□□□□□ -0.1
SNX1-213ENST00000561026 QRSL1Q9H0R6 528 aaKnown RBP14.4□□□□□ -0.1
SNX1-213ENST00000561026 OR51I1Q9H343 314 aa14.4□□□□□ -0.1
SNX1-213ENST00000561026 CXorf56Q9H5V9 222 aa14.4□□□□□ -0.1
SNX1-213ENST00000561026 SSU72Q9NP77 194 aaKnown RBP14.4□□□□□ -0.1
SNX1-213ENST00000561026 ANKRD28O15084 1053 aa14.39□□□□□ -0.11
SNX1-213ENST00000561026 SMAD9O15198 467 aaKnown RBP14.39□□□□□ -0.11
SNX1-213ENST00000561026 TM9SF1O15321 606 aa14.39□□□□□ -0.11
SNX1-213ENST00000561026 CYTIPO60759 359 aa14.39□□□□□ -0.11
SNX1-213ENST00000561026 H6PDO95479 791 aa14.39□□□□□ -0.11
SNX1-213ENST00000561026 AGR2O95994 175 aa14.39□□□□□ -0.11
SNX1-213ENST00000561026 UBTFL6P0CB48 400 aaPredicted RBP14.39□□□□□ -0.11
SNX1-213ENST00000561026 OR12D1P0DN82 309 aa14.39□□□□□ -0.11
SNX1-213ENST00000561026 UQCRC2P22695 453 aa14.39□□□□□ -0.11
SNX1-213ENST00000561026 SLC1A6P48664 564 aa14.39□□□□□ -0.11
SNX1-213ENST00000561026 ITGADQ13349 1161 aa14.39□□□□□ -0.11
SNX1-213ENST00000561026 MAPK14Q16539 360 aa14.39□□□□□ -0.11
SNX1-213ENST00000561026 ATAD3BQ5T9A4 648 aa14.39□□□□□ -0.11
SNX1-213ENST00000561026 ANXA8L1Q5VT79 327 aa14.39□□□□□ -0.11
SNX1-213ENST00000561026 ADAM5Q6NVV9 412 aa14.39□□□□□ -0.11
SNX1-213ENST00000561026 EIF3MQ7L2H7 374 aaKnown RBP14.39□□□□□ -0.11
SNX1-213ENST00000561026 ANKRD46Q86W74 232 aa14.39□□□□□ -0.11
SNX1-213ENST00000561026 VPS37AQ8NEZ2 397 aa14.39□□□□□ -0.11
SNX1-213ENST00000561026 XAGE5Q8WWM1 108 aa14.39□□□□□ -0.11
SNX1-213ENST00000561026 OIT3Q8WWZ8 545 aa14.39□□□□□ -0.11
SNX1-213ENST00000561026 TMEM234Q8WY98 164 aa14.39□□□□□ -0.11
SNX1-213ENST00000561026 TESCQ96BS2 214 aa14.39□□□□□ -0.11
SNX1-213ENST00000561026 SORT1Q99523 831 aa14.39□□□□□ -0.11
SNX1-213ENST00000561026 NGBQ9NPG2 151 aa14.39□□□□□ -0.11
SNX1-213ENST00000561026 SERINC1Q9NRX5 453 aa14.39□□□□□ -0.11
SNX1-213ENST00000561026 ACER3Q9NUN7 267 aa14.39□□□□□ -0.11
SNX1-213ENST00000561026 JMJD1CQ15652 2540 aa14.38□□□□□ -0.11
SNX1-213ENST00000561026 SMAD7O15105 426 aaKnown RBP14.38□□□□□ -0.11
SNX1-213ENST00000561026 KIAA0513O60268 411 aa14.38□□□□□ -0.11
SNX1-213ENST00000561026 CNOT4O95628 575 aaKnown RBP14.38□□□□□ -0.11
SNX1-213ENST00000561026 CPSF4O95639 269 aaKnown RBP14.38□□□□□ -0.11
SNX1-213ENST00000561026 PGCP20142 388 aa14.38□□□□□ -0.11
SNX1-213ENST00000561026 PGM1P36871 562 aa14.38□□□□□ -0.11
SNX1-213ENST00000561026 OR3A2P47893 321 aa14.38□□□□□ -0.11
SNX1-213ENST00000561026 RASGEF1BQ0VAM2 473 aa14.38□□□□□ -0.11
SNX1-213ENST00000561026 MERTKQ12866 999 aa14.38□□□□□ -0.11
SNX1-213ENST00000561026 CASP8Q14790 479 aa14.38□□□□□ -0.11
SNX1-213ENST00000561026 NCMAPQ5T1S8 102 aa14.38□□□□□ -0.11
SNX1-213ENST00000561026 TYW3Q6IPR3 259 aaKnown RBP14.38□□□□□ -0.11
SNX1-213ENST00000561026 TNFAIP8L2Q6P589 184 aaPredicted RBP14.38□□□□□ -0.11
SNX1-213ENST00000561026 TMPPEQ6ZT21 453 aa14.38□□□□□ -0.11
SNX1-213ENST00000561026 Q6ZT83 130 aa14.38□□□□□ -0.11
SNX1-213ENST00000561026 LRRC34Q8IZ02 419 aa14.38□□□□□ -0.11
SNX1-213ENST00000561026 LILRB1Q8NHL6 650 aaPredicted RBP14.38□□□□□ -0.11
SNX1-213ENST00000561026 ZNF75CPQ92670 426 aaPredicted RBP14.38□□□□□ -0.11
SNX1-213ENST00000561026 RAB8BQ92930 207 aa14.38□□□□□ -0.11
SNX1-213ENST00000561026 SAP130Q9H0E3 1048 aa14.38□□□□□ -0.11
SNX1-213ENST00000561026 ESRP2Q9H6T0 727 aaKnown RBP14.38□□□□□ -0.11
SNX1-213ENST00000561026 POLE3Q9NRF9 147 aa14.38□□□□□ -0.11
SNX1-213ENST00000561026 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.38□□□□□ -0.11
SNX1-213ENST00000561026 HAO1Q9UJM8 370 aa14.38□□□□□ -0.11
SNX1-213ENST00000561026 WDR45Q9Y484 360 aa14.38□□□□□ -0.11
SNX1-213ENST00000561026 RNF115Q9Y4L5 304 aa14.38□□□□□ -0.11
SNX1-213ENST00000561026 V9GYY5 206 aaPredicted RBP14.38□□□□□ -0.11
SNX1-213ENST00000561026 ZNF724A8MTY0 619 aa14.37□□□□□ -0.11
SNX1-213ENST00000561026 C9JVG2 144 aa14.37□□□□□ -0.11
SNX1-213ENST00000561026 BCAS1O75363 584 aaPredicted RBP14.37□□□□□ -0.11
SNX1-213ENST00000561026 LBPP18428 481 aa14.37□□□□□ -0.11
SNX1-213ENST00000561026 DIO1P49895 249 aa14.37□□□□□ -0.11
SNX1-213ENST00000561026 ATP5J2P56134 94 aa14.37□□□□□ -0.11
SNX1-213ENST00000561026 MPP2Q14168 576 aa14.37□□□□□ -0.11
SNX1-213ENST00000561026 CAPRIN1Q14444 709 aaKnown RBP14.37□□□□□ -0.11
SNX1-213ENST00000561026 SYT14P1Q58G82 188 aa14.37□□□□□ -0.11
SNX1-213ENST00000561026 SPANXN4Q5MJ08 99 aa14.37□□□□□ -0.11
SNX1-213ENST00000561026 SAXO2Q658L1 398 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms