RNA–Protein interactions for RNA: ENST00000560754.1

RNF31-223, Transcript of ring finger protein 31, human

TSL 3

Gene RNF31, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-223	ENST00000560754	FES	P07332	822 aa		12.08	□□□□□ -0.48
RNF31-223	ENST00000560754	RNF144A	P50876	292 aa	Predicted RBP	12.08	□□□□□ -0.48
RNF31-223	ENST00000560754	EMX2	Q04743	252 aa		12.08	□□□□□ -0.48
RNF31-223	ENST00000560754	BSPH1	Q075Z2	132 aa		12.08	□□□□□ -0.48
RNF31-223	ENST00000560754	RASGEF1B	Q0VAM2	473 aa		12.08	□□□□□ -0.48
RNF31-223	ENST00000560754	CBFB	Q13951	182 aa		12.08	□□□□□ -0.48
RNF31-223	ENST00000560754	QPRT	Q15274	297 aa		12.08	□□□□□ -0.48
RNF31-223	ENST00000560754	SMU1	Q2TAY7	513 aa		12.08	□□□□□ -0.48
RNF31-223	ENST00000560754	ARHGAP11B	Q3KRB8	267 aa		12.08	□□□□□ -0.48
RNF31-223	ENST00000560754	TIGD2	Q4W5G0	525 aa		12.08	□□□□□ -0.48
RNF31-223	ENST00000560754	ALKBH2	Q6NS38	261 aa		12.08	□□□□□ -0.48
RNF31-223	ENST00000560754	ATG4D	Q86TL0	474 aa	Predicted RBP	12.08	□□□□□ -0.48
RNF31-223	ENST00000560754	RIBC1	Q8N443	379 aa	Predicted RBP	12.08	□□□□□ -0.48
RNF31-223	ENST00000560754	TCP10L	Q8TDR4	215 aa		12.08	□□□□□ -0.48
RNF31-223	ENST00000560754	ST8SIA1	Q92185	356 aa		12.08	□□□□□ -0.48
RNF31-223	ENST00000560754	C1orf50	Q9BV19	199 aa		12.08	□□□□□ -0.48
RNF31-223	ENST00000560754	THUMPD3	Q9BV44	507 aa	Known RBP	12.08	□□□□□ -0.48
RNF31-223	ENST00000560754	DUSP26	Q9BV47	211 aa		12.08	□□□□□ -0.48
RNF31-223	ENST00000560754	POTEKP	Q9BYX7	375 aa		12.08	□□□□□ -0.48
RNF31-223	ENST00000560754	SLCO5A1	Q9H2Y9	848 aa		12.08	□□□□□ -0.48
RNF31-223	ENST00000560754	SERHL2	Q9H4I8	314 aa		12.08	□□□□□ -0.48
RNF31-223	ENST00000560754	IGHV3-15	A0A0B4J1V0	119 aa		12.07	□□□□□ -0.48
RNF31-223	ENST00000560754		C9JVG2	144 aa		12.07	□□□□□ -0.48
RNF31-223	ENST00000560754	RNF223	E7ERA6	249 aa		12.07	□□□□□ -0.48
RNF31-223	ENST00000560754	CLOCK	O15516	846 aa		12.07	□□□□□ -0.48
RNF31-223	ENST00000560754	STX11	O75558	287 aa		12.07	□□□□□ -0.48
RNF31-223	ENST00000560754	UGT2B17	O75795	530 aa		12.07	□□□□□ -0.48
RNF31-223	ENST00000560754	NUDT17	P0C025	328 aa		12.07	□□□□□ -0.48
RNF31-223	ENST00000560754	G6PD	P11413	515 aa		12.07	□□□□□ -0.48
RNF31-223	ENST00000560754	UBL4A	P11441	157 aa		12.07	□□□□□ -0.48
RNF31-223	ENST00000560754	MATN1	P21941	496 aa		12.07	□□□□□ -0.48
RNF31-223	ENST00000560754	EDNRA	P25101	427 aa		12.07	□□□□□ -0.48
RNF31-223	ENST00000560754	SLC7A1	P30825	629 aa		12.07	□□□□□ -0.48
RNF31-223	ENST00000560754	SESN3	P58005	492 aa		12.07	□□□□□ -0.48
RNF31-223	ENST00000560754	SKP2	Q13309	424 aa		12.07	□□□□□ -0.48
RNF31-223	ENST00000560754	PDK3	Q15120	406 aa		12.07	□□□□□ -0.48
RNF31-223	ENST00000560754	SPDYE7P	Q495Y7	208 aa		12.07	□□□□□ -0.48
RNF31-223	ENST00000560754	TIMM23B	Q5SRD1	257 aa		12.07	□□□□□ -0.48
RNF31-223	ENST00000560754	PDZK1	Q5T2W1	519 aa		12.07	□□□□□ -0.48
RNF31-223	ENST00000560754	ZCCHC23	Q6ZST2	131 aa		12.07	□□□□□ -0.48
RNF31-223	ENST00000560754	TMPPE	Q6ZT21	453 aa		12.07	□□□□□ -0.48
RNF31-223	ENST00000560754	DTX2	Q86UW9	622 aa		12.07	□□□□□ -0.48
RNF31-223	ENST00000560754	FNDC5	Q8NAU1	212 aa		12.07	□□□□□ -0.48
RNF31-223	ENST00000560754	OR5D16	Q8NGK9	328 aa		12.07	□□□□□ -0.48
RNF31-223	ENST00000560754	OR2W6P	Q8NHA6	318 aa		12.07	□□□□□ -0.48
RNF31-223	ENST00000560754	AGR3	Q8TD06	166 aa		12.07	□□□□□ -0.48
RNF31-223	ENST00000560754	MIPOL1	Q8TD10	442 aa		12.07	□□□□□ -0.48
RNF31-223	ENST00000560754	OIT3	Q8WWZ8	545 aa		12.07	□□□□□ -0.48
RNF31-223	ENST00000560754	ARL8A	Q96BM9	186 aa		12.07	□□□□□ -0.48
RNF31-223	ENST00000560754	ZNF775	Q96BV0	537 aa	Predicted RBP	12.07	□□□□□ -0.48
RNF31-223	ENST00000560754	ZIM3	Q96PE6	472 aa		12.07	□□□□□ -0.48
RNF31-223	ENST00000560754	TRAF4	Q9BUZ4	470 aa	Predicted RBP	12.07	□□□□□ -0.48
RNF31-223	ENST00000560754	SAP130	Q9H0E3	1048 aa		12.07	□□□□□ -0.48
RNF31-223	ENST00000560754	ACER3	Q9NUN7	267 aa		12.07	□□□□□ -0.48
RNF31-223	ENST00000560754	ASIC5	Q9NY37	505 aa		12.07	□□□□□ -0.48
RNF31-223	ENST00000560754	CISD1	Q9NZ45	108 aa	Known RBP	12.07	□□□□□ -0.48
RNF31-223	ENST00000560754	LGALS13	Q9UHV8	139 aa		12.07	□□□□□ -0.48
RNF31-223	ENST00000560754	PRSS50	Q9UI38	385 aa		12.07	□□□□□ -0.48
RNF31-223	ENST00000560754	MAGED1	Q9Y5V3	778 aa	Predicted RBP	12.07	□□□□□ -0.48
RNF31-223	ENST00000560754	IGKV3D-15	A0A087WSY6	115 aa		12.06	□□□□□ -0.48
RNF31-223	ENST00000560754	SHISA9	B4DS77	424 aa		12.06	□□□□□ -0.48
RNF31-223	ENST00000560754	CFLAR	O15519	480 aa		12.06	□□□□□ -0.48
RNF31-223	ENST00000560754	RAMP1	O60894	148 aa		12.06	□□□□□ -0.48
RNF31-223	ENST00000560754	SCN2B	O60939	215 aa		12.06	□□□□□ -0.48
RNF31-223	ENST00000560754	H6PD	O95479	791 aa		12.06	□□□□□ -0.48
RNF31-223	ENST00000560754	AK1	P00568	194 aa		12.06	□□□□□ -0.48
RNF31-223	ENST00000560754	IGHV4-39	P01824	125 aa		12.06	□□□□□ -0.48
RNF31-223	ENST00000560754	BPGM	P07738	259 aa		12.06	□□□□□ -0.48
RNF31-223	ENST00000560754	COX5A	P20674	150 aa		12.06	□□□□□ -0.48
RNF31-223	ENST00000560754	IGHV1-2	P23083	117 aa		12.06	□□□□□ -0.48
RNF31-223	ENST00000560754	FKBP2	P26885	142 aa	Known RBP	12.06	□□□□□ -0.48
RNF31-223	ENST00000560754	DIO1	P49895	249 aa		12.06	□□□□□ -0.48
RNF31-223	ENST00000560754	MAD2L1	Q13257	205 aa	Predicted RBP	12.06	□□□□□ -0.48
RNF31-223	ENST00000560754	PPA1	Q15181	289 aa		12.06	□□□□□ -0.48
RNF31-223	ENST00000560754	GPR68	Q15743	365 aa		12.06	□□□□□ -0.48
RNF31-223	ENST00000560754	C3orf33	Q6P1S2	294 aa		12.06	□□□□□ -0.48
RNF31-223	ENST00000560754	CXXC5	Q7LFL8	322 aa	Known RBP	12.06	□□□□□ -0.48
RNF31-223	ENST00000560754	GALNT5	Q7Z7M9	940 aa		12.06	□□□□□ -0.48
RNF31-223	ENST00000560754	MTDH	Q86UE4	582 aa	Known RBP	12.06	□□□□□ -0.48
RNF31-223	ENST00000560754	ZNF619	Q8N2I2	560 aa		12.06	□□□□□ -0.48
RNF31-223	ENST00000560754	ZNF433	Q8N7K0	673 aa	Predicted RBP	12.06	□□□□□ -0.48
RNF31-223	ENST00000560754	FAM71C	Q8NEG0	241 aa		12.06	□□□□□ -0.48
RNF31-223	ENST00000560754	OR8J2	Q8NGG1	315 aa		12.06	□□□□□ -0.48
RNF31-223	ENST00000560754	OR5AK3P	Q8NH89	298 aa		12.06	□□□□□ -0.48
RNF31-223	ENST00000560754	RFWD2	Q8NHY2	731 aa		12.06	□□□□□ -0.48
RNF31-223	ENST00000560754	TMEM234	Q8WY98	164 aa		12.06	□□□□□ -0.48
RNF31-223	ENST00000560754	TUBGCP3	Q96CW5	907 aa		12.06	□□□□□ -0.48
RNF31-223	ENST00000560754	OR5B2	Q96R09	309 aa		12.06	□□□□□ -0.48
RNF31-223	ENST00000560754	ZNF300	Q96RE9	604 aa	Predicted RBP	12.06	□□□□□ -0.48
RNF31-223	ENST00000560754	ROPN1B	Q9BZX4	212 aa	Predicted RBP	12.06	□□□□□ -0.48
RNF31-223	ENST00000560754	ROPN1	Q9HAT0	212 aa	Predicted RBP	12.06	□□□□□ -0.48
RNF31-223	ENST00000560754	SERINC1	Q9NRX5	453 aa		12.06	□□□□□ -0.48
RNF31-223	ENST00000560754	MKLN1	Q9UL63	735 aa		12.06	□□□□□ -0.48
RNF31-223	ENST00000560754		A0A1W2PP18	115 aa		12.05	□□□□□ -0.48
RNF31-223	ENST00000560754	OR5H1	A6NKK0	313 aa		12.05	□□□□□ -0.48
RNF31-223	ENST00000560754	RNASET2	O00584	256 aa	Known RBP	12.05	□□□□□ -0.48
RNF31-223	ENST00000560754	NDUFS7	O75251	213 aa		12.05	□□□□□ -0.48
RNF31-223	ENST00000560754	SPAG7	O75391	227 aa		12.05	□□□□□ -0.48
RNF31-223	ENST00000560754	LYZL6	O75951	148 aa		12.05	□□□□□ -0.48
RNF31-223	ENST00000560754	CSTA	P01040	98 aa		12.05	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms