RNA–Protein interactions for RNA: ENST00000560734.5

SHF-208, Transcript of Src homology 2 domain containing F, humanhuman

TSL 3 BASIC

Gene SHF, Length 1,731 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-208ENST00000560734 RTL4Q6ZR62 310 aa23.05■■□□□ 1.28
SHF-208ENST00000560734 RNF217Q8TC41 542 aa23.05■■□□□ 1.28
SHF-208ENST00000560734 NUDT9Q9BW91 350 aa23.05■■□□□ 1.28
SHF-208ENST00000560734 GAREM1Q9H706 876 aa23.05■■□□□ 1.28
SHF-208ENST00000560734 ATP13A2Q9NQ11 1180 aa23.05■■□□□ 1.28
SHF-208ENST00000560734 H2AFY2Q9P0M6 372 aaPredicted RBP23.05■■□□□ 1.28
SHF-208ENST00000560734 CLEC2DQ9UHP7 191 aa23.05■■□□□ 1.28
SHF-208ENST00000560734 GPR52Q9Y2T5 361 aa23.05■■□□□ 1.28
SHF-208ENST00000560734 KPNA4O00629 521 aaPredicted RBP23.05■■□□□ 1.28
SHF-208ENST00000560734 SCDO00767 359 aa23.05■■□□□ 1.28
SHF-208ENST00000560734 HPGDP15428 266 aa23.05■■□□□ 1.28
SHF-208ENST00000560734 IDUAP35475 653 aa23.05■■□□□ 1.28
SHF-208ENST00000560734 EBPQ15125 230 aaKnown RBP23.05■■□□□ 1.28
SHF-208ENST00000560734 NNATQ16517 81 aa23.05■■□□□ 1.28
SHF-208ENST00000560734 TUBA3EQ6PEY2 450 aa23.05■■□□□ 1.28
SHF-208ENST00000560734 HSDL2Q6YN16 418 aa23.05■■□□□ 1.28
SHF-208ENST00000560734 COX15Q7KZN9 410 aa23.05■■□□□ 1.28
SHF-208ENST00000560734 TMPRSS9Q7Z410 1059 aa23.05■■□□□ 1.28
SHF-208ENST00000560734 ZNF321PQ8N8H1 164 aa23.05■■□□□ 1.28
SHF-208ENST00000560734 OR9Q1Q8NGQ5 310 aa23.05■■□□□ 1.28
SHF-208ENST00000560734 CMC2Q9NRP2 79 aa23.05■■□□□ 1.28
SHF-208ENST00000560734 CCDC59Q9P031 241 aaKnown RBP23.05■■□□□ 1.28
SHF-208ENST00000560734 SEC14L4Q9UDX3 406 aa23.05■■□□□ 1.28
SHF-208ENST00000560734 FBXO4Q9UKT5 387 aa23.05■■□□□ 1.28
SHF-208ENST00000560734 PMF1-BGLAPU3KQ54 211 aa23.05■■□□□ 1.28
SHF-208ENST00000560734 IGHV5-10-1A0A0J9YXX1 117 aa23.04■■□□□ 1.28
SHF-208ENST00000560734 J3QRK9 145 aa23.04■■□□□ 1.28
SHF-208ENST00000560734 SAGP10523 405 aaPredicted RBP23.04■■□□□ 1.28
SHF-208ENST00000560734 PNMTP11086 282 aa23.04■■□□□ 1.28
SHF-208ENST00000560734 RNF144AP50876 292 aaPredicted RBP23.04■■□□□ 1.28
SHF-208ENST00000560734 HLA-DQA1Q5Y7H0 255 aa23.04■■□□□ 1.28
SHF-208ENST00000560734 WBP2NLQ6ICG8 309 aa23.04■■□□□ 1.28
SHF-208ENST00000560734 MFSD4AQ8N468 514 aa23.04■■□□□ 1.28
SHF-208ENST00000560734 NXF2Q9GZY0 626 aaKnown RBP23.04■■□□□ 1.28
SHF-208ENST00000560734 C12orf10Q9HB07 376 aa23.04■■□□□ 1.28
SHF-208ENST00000560734 NDUFB11Q9NX14 153 aa23.04■■□□□ 1.28
SHF-208ENST00000560734 MKL2Q9ULH7 1088 aa23.04■■□□□ 1.28
SHF-208ENST00000560734 ATXN7L1Q9ULK2 861 aaPredicted RBP23.04■■□□□ 1.28
SHF-208ENST00000560734 A0A1W2PQD3 144 aa23.03■■□□□ 1.28
SHF-208ENST00000560734 UTS2O95399 124 aa23.03■■□□□ 1.28
SHF-208ENST00000560734 CER1O95813 267 aa23.03■■□□□ 1.28
SHF-208ENST00000560734 CYC1P08574 325 aa23.03■■□□□ 1.28
SHF-208ENST00000560734 UBL4AP11441 157 aa23.03■■□□□ 1.28
SHF-208ENST00000560734 EFNA3P52797 238 aa23.03■■□□□ 1.28
SHF-208ENST00000560734 WNT4P56705 351 aa23.03■■□□□ 1.28
SHF-208ENST00000560734 SKP2Q13309 424 aa23.03■■□□□ 1.28
SHF-208ENST00000560734 SSX1Q16384 188 aa23.03■■□□□ 1.28
SHF-208ENST00000560734 C1orf189Q5VU69 101 aa23.03■■□□□ 1.28
SHF-208ENST00000560734 SLC29A4Q7RTT9 530 aa23.03■■□□□ 1.28
SHF-208ENST00000560734 CENPSQ8N2Z9 138 aa23.03■■□□□ 1.28
SHF-208ENST00000560734 AMER2Q8N7J2 671 aa23.03■■□□□ 1.28
SHF-208ENST00000560734 EFHD2Q96C19 240 aaPredicted RBP23.03■■□□□ 1.28
SHF-208ENST00000560734 SLC7A5P2Q9GIP4 190 aa23.03■■□□□ 1.28
SHF-208ENST00000560734 RARRES3Q9UL19 164 aa23.03■■□□□ 1.28
SHF-208ENST00000560734 hCG_2014768A0A024R1R8 64 aa23.02■■□□□ 1.28
SHF-208ENST00000560734 A8MUA0 341 aa23.02■■□□□ 1.28
SHF-208ENST00000560734 RFPL3O75679 317 aa23.02■■□□□ 1.28
SHF-208ENST00000560734 IGHA1P01876 353 aa23.02■■□□□ 1.28
SHF-208ENST00000560734 CKMT1AP12532 417 aa23.02■■□□□ 1.28
SHF-208ENST00000560734 SLC6A6P31641 620 aa23.02■■□□□ 1.28
SHF-208ENST00000560734 CXXC5Q7LFL8 322 aaKnown RBP23.02■■□□□ 1.28
SHF-208ENST00000560734 NUP54Q7Z3B4 507 aa23.02■■□□□ 1.28
SHF-208ENST00000560734 CADM2Q8N3J6 435 aa23.02■■□□□ 1.28
SHF-208ENST00000560734 ZNF441Q8N8Z8 693 aa23.02■■□□□ 1.28
SHF-208ENST00000560734 PSD4Q8NDX1 1056 aa23.02■■□□□ 1.28
SHF-208ENST00000560734 OR13C2Q8NGS9 318 aa23.02■■□□□ 1.28
SHF-208ENST00000560734 OR51E2Q9H255 320 aa23.02■■□□□ 1.28
SHF-208ENST00000560734 SLC22A11Q9NSA0 550 aa23.02■■□□□ 1.28
SHF-208ENST00000560734 DNAH14Q0VDD8 3507 aa23.02■■□□□ 1.28
SHF-208ENST00000560734 BDP1A6H8Y1 2624 aa23.02■■□□□ 1.28
SHF-208ENST00000560734 NCOR1O75376 2440 aa23.02■■□□□ 1.28
SHF-208ENST00000560734 ZNF264O43296 627 aa23.02■■□□□ 1.28
SHF-208ENST00000560734 CH25HO95992 272 aa23.02■■□□□ 1.28
SHF-208ENST00000560734 CFIP05156 583 aa23.02■■□□□ 1.28
SHF-208ENST00000560734 OCM2P0CE71 109 aa23.02■■□□□ 1.28
SHF-208ENST00000560734 OCMP0CE72 109 aaPredicted RBP23.02■■□□□ 1.28
SHF-208ENST00000560734 PSMA1P25786 263 aaKnown RBP23.02■■□□□ 1.28
SHF-208ENST00000560734 ETV5P41161 510 aa23.02■■□□□ 1.28
SHF-208ENST00000560734 SLC6A8P48029 635 aa23.02■■□□□ 1.28
SHF-208ENST00000560734 ETV1P50549 477 aa23.02■■□□□ 1.28
SHF-208ENST00000560734 DUSP3P51452 185 aaPredicted RBP23.02■■□□□ 1.28
SHF-208ENST00000560734 FOXK2Q01167 660 aa23.02■■□□□ 1.28
SHF-208ENST00000560734 ZNF554Q86TJ5 538 aa23.02■■□□□ 1.28
SHF-208ENST00000560734 OAFQ86UD1 273 aa23.02■■□□□ 1.28
SHF-208ENST00000560734 C9orf40Q8IXQ3 194 aa23.02■■□□□ 1.28
SHF-208ENST00000560734 ABTB1Q969K4 478 aaPredicted RBP23.02■■□□□ 1.28
SHF-208ENST00000560734 SGTBQ96EQ0 304 aa23.02■■□□□ 1.28
SHF-208ENST00000560734 TMEM43Q9BTV4 400 aa23.02■■□□□ 1.28
SHF-208ENST00000560734 MROQ9BYG7 248 aa23.02■■□□□ 1.28
SHF-208ENST00000560734 WWTR1Q9GZV5 400 aa23.02■■□□□ 1.28
SHF-208ENST00000560734 LAT2Q9GZY6 243 aa23.02■■□□□ 1.28
SHF-208ENST00000560734 HINT3Q9NQE9 182 aaKnown RBP23.02■■□□□ 1.28
SHF-208ENST00000560734 UNC13CQ8NB66 2214 aa23.01■■□□□ 1.27
SHF-208ENST00000560734 TSPAN2O60636 221 aa23.01■■□□□ 1.27
SHF-208ENST00000560734 PEPDP12955 493 aa23.01■■□□□ 1.27
SHF-208ENST00000560734 CPEP16870 476 aa23.01■■□□□ 1.27
SHF-208ENST00000560734 CD40LGP29965 261 aa23.01■■□□□ 1.27
SHF-208ENST00000560734 PNLIPRP2P54317 469 aa23.01■■□□□ 1.27
SHF-208ENST00000560734 ITGADQ13349 1161 aa23.01■■□□□ 1.27
SHF-208ENST00000560734 ZNF404Q494X3 552 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms