RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 RAC3P60763 192 aa9.25□□□□□ -0.93
CDC42BPB-207ENST00000560492 LASP1Q14847 261 aaKnown RBP9.25□□□□□ -0.93
CDC42BPB-207ENST00000560492 MLC1Q15049 377 aa9.25□□□□□ -0.93
CDC42BPB-207ENST00000560492 TOMM34Q15785 309 aaPredicted RBP9.25□□□□□ -0.93
CDC42BPB-207ENST00000560492 SPDYE7PQ495Y7 208 aa9.25□□□□□ -0.93
CDC42BPB-207ENST00000560492 ZNF385BQ569K4 471 aa9.25□□□□□ -0.93
CDC42BPB-207ENST00000560492 ARL13AQ5H913 290 aaPredicted RBP9.25□□□□□ -0.93
CDC42BPB-207ENST00000560492 FAM120AOSQ5T036 256 aa9.25□□□□□ -0.93
CDC42BPB-207ENST00000560492 C11orf71Q6IPW1 123 aa9.25□□□□□ -0.93
CDC42BPB-207ENST00000560492 C3orf33Q6P1S2 294 aa9.25□□□□□ -0.93
CDC42BPB-207ENST00000560492 CBLN3Q6UW01 205 aa9.25□□□□□ -0.93
CDC42BPB-207ENST00000560492 MTERF4Q7Z6M4 381 aaKnown RBP9.25□□□□□ -0.93
CDC42BPB-207ENST00000560492 P2RY8Q86VZ1 359 aa9.25□□□□□ -0.93
CDC42BPB-207ENST00000560492 TMEM151AQ8N4L1 468 aa9.25□□□□□ -0.93
CDC42BPB-207ENST00000560492 TOR1AIP2Q8NFQ8 470 aa9.25□□□□□ -0.93
CDC42BPB-207ENST00000560492 FAM76AQ8TAV0 307 aa9.25□□□□□ -0.93
CDC42BPB-207ENST00000560492 C10orf105Q8TEF2 133 aa9.25□□□□□ -0.93
CDC42BPB-207ENST00000560492 PROX1Q92786 737 aa9.25□□□□□ -0.93
CDC42BPB-207ENST00000560492 L3HYPDHQ96EM0 354 aa9.25□□□□□ -0.93
CDC42BPB-207ENST00000560492 DNAJA3Q96EY1 480 aa9.25□□□□□ -0.93
CDC42BPB-207ENST00000560492 FMO2Q99518 471 aa9.25□□□□□ -0.93
CDC42BPB-207ENST00000560492 RHOXF2Q9BQY4 288 aa9.25□□□□□ -0.93
CDC42BPB-207ENST00000560492 PIMREGQ9BSJ6 248 aa9.25□□□□□ -0.93
CDC42BPB-207ENST00000560492 BTBD2Q9BX70 525 aa9.25□□□□□ -0.93
CDC42BPB-207ENST00000560492 FKRPQ9H9S5 495 aa9.25□□□□□ -0.93
CDC42BPB-207ENST00000560492 BCO1Q9HAY6 547 aa9.25□□□□□ -0.93
CDC42BPB-207ENST00000560492 EMC3Q9P0I2 261 aa9.25□□□□□ -0.93
CDC42BPB-207ENST00000560492 ZNF180Q9UJW8 692 aa9.25□□□□□ -0.93
CDC42BPB-207ENST00000560492 NOSIPQ9Y314 301 aaKnown RBP9.25□□□□□ -0.93
CDC42BPB-207ENST00000560492 TRAF6Q9Y4K3 522 aa9.25□□□□□ -0.93
CDC42BPB-207ENST00000560492 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.24□□□□□ -0.93
CDC42BPB-207ENST00000560492 SMAD9O15198 467 aaKnown RBP9.24□□□□□ -0.93
CDC42BPB-207ENST00000560492 WIPF1O43516 503 aa9.24□□□□□ -0.93
CDC42BPB-207ENST00000560492 EFNA2O43921 213 aa9.24□□□□□ -0.93
CDC42BPB-207ENST00000560492 HSPA4LO95757 839 aa9.24□□□□□ -0.93
CDC42BPB-207ENST00000560492 IFI6P09912 130 aa9.24□□□□□ -0.93
CDC42BPB-207ENST00000560492 MYL2P10916 166 aa9.24□□□□□ -0.93
CDC42BPB-207ENST00000560492 PRKCAP17252 672 aa9.24□□□□□ -0.93
CDC42BPB-207ENST00000560492 EDNRAP25101 427 aa9.24□□□□□ -0.93
CDC42BPB-207ENST00000560492 CD40P25942 277 aa9.24□□□□□ -0.93
CDC42BPB-207ENST00000560492 EFNA4P52798 201 aa9.24□□□□□ -0.93
CDC42BPB-207ENST00000560492 SUMO3P55854 103 aaPredicted RBP9.24□□□□□ -0.93
CDC42BPB-207ENST00000560492 RPL38P63173 70 aaKnown RBP9.24□□□□□ -0.93
CDC42BPB-207ENST00000560492 TP53BP2Q13625 1128 aa9.24□□□□□ -0.93
CDC42BPB-207ENST00000560492 SQLEQ14534 574 aa9.24□□□□□ -0.93
CDC42BPB-207ENST00000560492 C9orf135Q5VTT2 229 aa9.24□□□□□ -0.93
CDC42BPB-207ENST00000560492 B3GLCTQ6Y288 498 aa9.24□□□□□ -0.93
CDC42BPB-207ENST00000560492 ZNF433Q8N7K0 673 aaPredicted RBP9.24□□□□□ -0.93
CDC42BPB-207ENST00000560492 CCDC63Q8NA47 563 aa9.24□□□□□ -0.93
CDC42BPB-207ENST00000560492 NOA1Q8NC60 698 aaKnown RBP9.24□□□□□ -0.93
CDC42BPB-207ENST00000560492 ADAMTS15Q8TE58 950 aa9.24□□□□□ -0.93
CDC42BPB-207ENST00000560492 APH1AQ96BI3 265 aa9.24□□□□□ -0.93
CDC42BPB-207ENST00000560492 FBXO17Q96EF6 278 aa9.24□□□□□ -0.93
CDC42BPB-207ENST00000560492 ZHX1-C8orf76Q96EF9 292 aa9.24□□□□□ -0.93
CDC42BPB-207ENST00000560492 GIMAP5Q96F15 307 aa9.24□□□□□ -0.93
CDC42BPB-207ENST00000560492 MRGPRX4Q96LA9 322 aa9.24□□□□□ -0.93
CDC42BPB-207ENST00000560492 HOXD1Q9GZZ0 328 aa9.24□□□□□ -0.93
CDC42BPB-207ENST00000560492 QRSL1Q9H0R6 528 aaKnown RBP9.24□□□□□ -0.93
CDC42BPB-207ENST00000560492 TSPYL1Q9H0U9 437 aa9.24□□□□□ -0.93
CDC42BPB-207ENST00000560492 GSTO2Q9H4Y5 243 aa9.24□□□□□ -0.93
CDC42BPB-207ENST00000560492 REEP4Q9H6H4 257 aa9.24□□□□□ -0.93
CDC42BPB-207ENST00000560492 EML4Q9HC35 981 aaKnown RBP9.24□□□□□ -0.93
CDC42BPB-207ENST00000560492 SERINC1Q9NRX5 453 aa9.24□□□□□ -0.93
CDC42BPB-207ENST00000560492 NTMQ9P121 344 aa9.24□□□□□ -0.93
CDC42BPB-207ENST00000560492 FAF1Q9UNN5 650 aaPredicted RBP9.24□□□□□ -0.93
CDC42BPB-207ENST00000560492 SERTM1A2A2V5 107 aa9.23□□□□□ -0.93
CDC42BPB-207ENST00000560492 SLC35F4A4IF30 521 aa9.23□□□□□ -0.93
CDC42BPB-207ENST00000560492 H7C417 338 aa9.23□□□□□ -0.93
CDC42BPB-207ENST00000560492 SULT2B1O00204 365 aa9.23□□□□□ -0.93
CDC42BPB-207ENST00000560492 SLC28A1O00337 649 aa9.23□□□□□ -0.93
CDC42BPB-207ENST00000560492 ZNF264O43296 627 aa9.23□□□□□ -0.93
CDC42BPB-207ENST00000560492 CYTIPO60759 359 aa9.23□□□□□ -0.93
CDC42BPB-207ENST00000560492 TGFAP01135 160 aa9.23□□□□□ -0.93
CDC42BPB-207ENST00000560492 HMGN2P05204 90 aaKnown RBP9.23□□□□□ -0.93
CDC42BPB-207ENST00000560492 UBL4AP11441 157 aa9.23□□□□□ -0.93
CDC42BPB-207ENST00000560492 DDX5P17844 614 aaKnown RBP9.23□□□□□ -0.93
CDC42BPB-207ENST00000560492 COX5AP20674 150 aa9.23□□□□□ -0.93
CDC42BPB-207ENST00000560492 SRP14P37108 136 aaKnown RBP9.23□□□□□ -0.93
CDC42BPB-207ENST00000560492 MAP3K8P41279 467 aa9.23□□□□□ -0.93
CDC42BPB-207ENST00000560492 CSNK2A1P68400 391 aaPredicted RBP9.23□□□□□ -0.93
CDC42BPB-207ENST00000560492 RUNX1T1Q06455 604 aa9.23□□□□□ -0.93
CDC42BPB-207ENST00000560492 CBFBQ13951 182 aa9.23□□□□□ -0.93
CDC42BPB-207ENST00000560492 QPRTQ15274 297 aa9.23□□□□□ -0.93
CDC42BPB-207ENST00000560492 GALNTL6Q49A17 601 aa9.23□□□□□ -0.93
CDC42BPB-207ENST00000560492 TIGD2Q4W5G0 525 aa9.23□□□□□ -0.93
CDC42BPB-207ENST00000560492 DCST2Q5T1A1 773 aa9.23□□□□□ -0.93
CDC42BPB-207ENST00000560492 FBXW9Q5XUX1 488 aa9.23□□□□□ -0.93
CDC42BPB-207ENST00000560492 CLEC6AQ6EIG7 209 aa9.23□□□□□ -0.93
CDC42BPB-207ENST00000560492 ZNF544Q6NX49 715 aa9.23□□□□□ -0.93
CDC42BPB-207ENST00000560492 ZCCHC12Q6PEW1 402 aa9.23□□□□□ -0.93
CDC42BPB-207ENST00000560492 KLHL24Q6TFL4 600 aa9.23□□□□□ -0.93
CDC42BPB-207ENST00000560492 GPR119Q8TDV5 335 aa9.23□□□□□ -0.93
CDC42BPB-207ENST00000560492 CCDC126Q96EE4 140 aa9.23□□□□□ -0.93
CDC42BPB-207ENST00000560492 VRK1Q99986 396 aaPredicted RBP9.23□□□□□ -0.93
CDC42BPB-207ENST00000560492 KCNS3Q9BQ31 491 aa9.23□□□□□ -0.93
CDC42BPB-207ENST00000560492 INPP5KQ9BT40 448 aa9.23□□□□□ -0.93
CDC42BPB-207ENST00000560492 ANKZF1Q9H8Y5 726 aa9.23□□□□□ -0.93
CDC42BPB-207ENST00000560492 ASB6Q9NWX5 421 aa9.23□□□□□ -0.93
CDC42BPB-207ENST00000560492 C1orf109Q9NX04 203 aa9.23□□□□□ -0.93
CDC42BPB-207ENST00000560492 UPB1Q9UBR1 384 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms