RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 SQSTM1Q13501 440 aa12.59□□□□□ -0.39
TRAF3-208ENST00000560371 RFLNAQ6ZTI6 216 aa12.59□□□□□ -0.39
TRAF3-208ENST00000560371 PRSS48Q7RTY5 328 aa12.59□□□□□ -0.39
TRAF3-208ENST00000560371 MEX3DQ86XN8 651 aaKnown RBP12.59□□□□□ -0.39
TRAF3-208ENST00000560371 PIAS4Q8N2W9 510 aaPredicted RBP12.59□□□□□ -0.39
TRAF3-208ENST00000560371 ENDOVQ8N8Q3 282 aaKnown RBP12.59□□□□□ -0.39
TRAF3-208ENST00000560371 ZNF578Q96N58 590 aaPredicted RBP12.59□□□□□ -0.39
TRAF3-208ENST00000560371 PAPOLGQ9BWT3 736 aaKnown RBP12.59□□□□□ -0.39
TRAF3-208ENST00000560371 GPR45Q9Y5Y3 372 aa12.59□□□□□ -0.39
TRAF3-208ENST00000560371 CACNA1IQ9P0X4 2223 aa12.59□□□□□ -0.39
TRAF3-208ENST00000560371 SERPINA5P05154 406 aa12.59□□□□□ -0.39
TRAF3-208ENST00000560371 GNB3P16520 340 aa12.59□□□□□ -0.39
TRAF3-208ENST00000560371 WNT4P56705 351 aa12.59□□□□□ -0.39
TRAF3-208ENST00000560371 OR1Q1Q15612 314 aa12.59□□□□□ -0.39
TRAF3-208ENST00000560371 SLC5A12Q1EHB4 618 aa12.59□□□□□ -0.39
TRAF3-208ENST00000560371 ZNF610Q8N9Z0 462 aa12.59□□□□□ -0.39
TRAF3-208ENST00000560371 OR6Q1Q8NGQ2 317 aa12.59□□□□□ -0.39
TRAF3-208ENST00000560371 C22orf15Q8WYQ4 148 aa12.59□□□□□ -0.39
TRAF3-208ENST00000560371 OBP2BQ9NPH6 170 aa12.59□□□□□ -0.39
TRAF3-208ENST00000560371 WIF1Q9Y5W5 379 aa12.59□□□□□ -0.39
TRAF3-208ENST00000560371 HOXC11O43248 304 aaPredicted RBP12.59□□□□□ -0.39
TRAF3-208ENST00000560371 SLC16A7O60669 478 aa12.59□□□□□ -0.39
TRAF3-208ENST00000560371 ITGB8P26012 769 aa12.59□□□□□ -0.39
TRAF3-208ENST00000560371 POLR2HP52434 150 aaKnown RBP12.59□□□□□ -0.39
TRAF3-208ENST00000560371 HOXC5Q00444 222 aa12.59□□□□□ -0.39
TRAF3-208ENST00000560371 BORAQ6PGQ7 559 aa12.59□□□□□ -0.39
TRAF3-208ENST00000560371 C6orf89Q6UWU4 347 aa12.59□□□□□ -0.39
TRAF3-208ENST00000560371 RTN4RL1Q86UN2 441 aaPredicted RBP12.59□□□□□ -0.39
TRAF3-208ENST00000560371 CCDC71LQ8N9Z2 235 aa12.59□□□□□ -0.39
TRAF3-208ENST00000560371 SLC37A2Q8TED4 501 aa12.59□□□□□ -0.39
TRAF3-208ENST00000560371 TMEM184BQ9Y519 407 aaPredicted RBP12.59□□□□□ -0.39
TRAF3-208ENST00000560371 PCDHGA7Q9Y5G6 932 aa12.59□□□□□ -0.39
TRAF3-208ENST00000560371 ANKRD31Q8N7Z5 1873 aa12.59□□□□□ -0.39
TRAF3-208ENST00000560371 IFNA2P01563 188 aa12.59□□□□□ -0.39
TRAF3-208ENST00000560371 DBHP09172 617 aa12.59□□□□□ -0.39
TRAF3-208ENST00000560371 ADPRHP54922 357 aa12.59□□□□□ -0.39
TRAF3-208ENST00000560371 SLC22A6Q4U2R8 563 aa12.59□□□□□ -0.39
TRAF3-208ENST00000560371 CSNK2A3Q8NEV1 391 aa12.59□□□□□ -0.39
TRAF3-208ENST00000560371 OR5W2Q8NH69 310 aa12.59□□□□□ -0.39
TRAF3-208ENST00000560371 ZNF649Q9BS31 505 aa12.59□□□□□ -0.39
TRAF3-208ENST00000560371 SMOXQ9NWM0 555 aa12.59□□□□□ -0.39
TRAF3-208ENST00000560371 B3GNT2Q9NY97 397 aa12.59□□□□□ -0.39
TRAF3-208ENST00000560371 AGAP5A6NIR3 686 aa12.59□□□□□ -0.39
TRAF3-208ENST00000560371 MEN1O00255 615 aa12.59□□□□□ -0.39
TRAF3-208ENST00000560371 FXYD4P59646 89 aa12.59□□□□□ -0.39
TRAF3-208ENST00000560371 C9orf135Q5VTT2 229 aa12.59□□□□□ -0.39
TRAF3-208ENST00000560371 PAPD4Q6PIY7 484 aaKnown RBP12.59□□□□□ -0.39
TRAF3-208ENST00000560371 EMC9Q9Y3B6 208 aa12.59□□□□□ -0.39
TRAF3-208ENST00000560371 DDX60LQ5H9U9 1706 aaKnown RBP12.59□□□□□ -0.39
TRAF3-208ENST00000560371 RP2O75695 350 aa12.59□□□□□ -0.39
TRAF3-208ENST00000560371 TPPPO94811 219 aa12.59□□□□□ -0.39
TRAF3-208ENST00000560371 SRFP11831 508 aa12.59□□□□□ -0.39
TRAF3-208ENST00000560371 DPY19L4Q7Z388 723 aa12.59□□□□□ -0.39
TRAF3-208ENST00000560371 CD300LFQ8TDQ1 290 aa12.59□□□□□ -0.39
TRAF3-208ENST00000560371 EVA1AQ9H8M9 152 aa12.59□□□□□ -0.39
TRAF3-208ENST00000560371 FAM230AA0A1W2PPH8 454 aa12.58□□□□□ -0.39
TRAF3-208ENST00000560371 H2AFB2P0C5Z0 115 aa12.58□□□□□ -0.39
TRAF3-208ENST00000560371 RAB3AP20336 220 aa12.58□□□□□ -0.39
TRAF3-208ENST00000560371 ADRA1AP35348 466 aa12.58□□□□□ -0.39
TRAF3-208ENST00000560371 PTH2RP49190 550 aa12.58□□□□□ -0.39
TRAF3-208ENST00000560371 MBTPS1Q14703 1052 aa12.58□□□□□ -0.39
TRAF3-208ENST00000560371 LRRC18Q8N456 261 aa12.58□□□□□ -0.39
TRAF3-208ENST00000560371 STOML3Q8TAV4 291 aa12.58□□□□□ -0.39
TRAF3-208ENST00000560371 EGLN2Q96KS0 407 aa12.58□□□□□ -0.39
TRAF3-208ENST00000560371 PHOX2BQ99453 314 aa12.58□□□□□ -0.39
TRAF3-208ENST00000560371 OR2S2Q9NQN1 319 aa12.58□□□□□ -0.39
TRAF3-208ENST00000560371 TM7SF3Q9NS93 570 aa12.58□□□□□ -0.39
TRAF3-208ENST00000560371 ADAM29Q9UKF5 820 aa12.58□□□□□ -0.39
TRAF3-208ENST00000560371 GPX3P22352 226 aa12.58□□□□□ -0.4
TRAF3-208ENST00000560371 HES5Q5TA89 166 aa12.58□□□□□ -0.4
TRAF3-208ENST00000560371 VASNQ6EMK4 673 aa12.58□□□□□ -0.4
TRAF3-208ENST00000560371 VRK2Q86Y07 508 aa12.58□□□□□ -0.4
TRAF3-208ENST00000560371 EEF1E1-BLOC1S5C9J1V9 151 aa12.58□□□□□ -0.4
TRAF3-208ENST00000560371 H0YIV9 168 aa12.58□□□□□ -0.4
TRAF3-208ENST00000560371 C14orf28Q4W4Y0 310 aa12.58□□□□□ -0.4
TRAF3-208ENST00000560371 CDC6Q99741 560 aa12.58□□□□□ -0.4
TRAF3-208ENST00000560371 NUDT22Q9BRQ3 303 aa12.58□□□□□ -0.4
TRAF3-208ENST00000560371 SLC6A5Q9Y345 797 aa12.58□□□□□ -0.4
TRAF3-208ENST00000560371 TRAV27A0A087WT01 109 aa12.58□□□□□ -0.4
TRAF3-208ENST00000560371 F5H0A9 414 aaPredicted RBP12.58□□□□□ -0.4
TRAF3-208ENST00000560371 DDAH2O95865 285 aa12.58□□□□□ -0.4
TRAF3-208ENST00000560371 MAP2K3P46734 347 aa12.58□□□□□ -0.4
TRAF3-208ENST00000560371 ZNF81P51508 661 aa12.58□□□□□ -0.4
TRAF3-208ENST00000560371 GABARAPL2P60520 117 aa12.58□□□□□ -0.4
TRAF3-208ENST00000560371 MISPQ8IVT2 679 aa12.58□□□□□ -0.4
TRAF3-208ENST00000560371 LMNTD1Q8N9Z9 388 aa12.58□□□□□ -0.4
TRAF3-208ENST00000560371 COG8Q96MW5 612 aa12.58□□□□□ -0.4
TRAF3-208ENST00000560371 MRPL15Q9P015 296 aaKnown RBP12.58□□□□□ -0.4
TRAF3-208ENST00000560371 SHISA7A6NL88 538 aa12.58□□□□□ -0.4
TRAF3-208ENST00000560371 CDK2P24941 298 aa12.58□□□□□ -0.4
TRAF3-208ENST00000560371 MKXQ8IYA7 352 aa12.58□□□□□ -0.4
TRAF3-208ENST00000560371 UBALD2Q8IYN6 164 aa12.58□□□□□ -0.4
TRAF3-208ENST00000560371 ZNF775Q96BV0 537 aaPredicted RBP12.58□□□□□ -0.4
TRAF3-208ENST00000560371 C1QTNF2Q9BXJ5 285 aa12.58□□□□□ -0.4
TRAF3-208ENST00000560371 EPHX3Q9H6B9 360 aa12.58□□□□□ -0.4
TRAF3-208ENST00000560371 B3GALT1Q9Y5Z6 326 aa12.58□□□□□ -0.4
TRAF3-208ENST00000560371 F10P00742 488 aa12.58□□□□□ -0.4
TRAF3-208ENST00000560371 PRSS3P35030 304 aa12.58□□□□□ -0.4
TRAF3-208ENST00000560371 CXCR4P61073 352 aa12.58□□□□□ -0.4
TRAF3-208ENST00000560371 TP53I3Q53FA7 332 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms