RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 RPL13AP3Q6NVV1 102 aa16.37■□□□□ 0.21
SNX1-208ENST00000559844 TUBA1AQ71U36 451 aa16.37■□□□□ 0.21
SNX1-208ENST00000559844 SLC34A3Q8N130 599 aa16.37■□□□□ 0.21
SNX1-208ENST00000559844 DYNC2LI1Q8TCX1 351 aa16.37■□□□□ 0.21
SNX1-208ENST00000559844 CNOT9Q92600 299 aaKnown RBP16.37■□□□□ 0.21
SNX1-208ENST00000559844 ZHX1-C8orf76Q96EF9 292 aa16.37■□□□□ 0.21
SNX1-208ENST00000559844 MGLLQ99685 303 aa16.37■□□□□ 0.21
SNX1-208ENST00000559844 TAS2R16Q9NYV7 291 aa16.37■□□□□ 0.21
SNX1-208ENST00000559844 DIMT1Q9UNQ2 313 aaKnown RBP16.37■□□□□ 0.21
SNX1-208ENST00000559844 CFL2Q9Y281 166 aa16.37■□□□□ 0.21
SNX1-208ENST00000559844 MED31Q9Y3C7 131 aa16.37■□□□□ 0.21
SNX1-208ENST00000559844 AHCTF1Q8WYP5 2266 aa16.36■□□□□ 0.21
SNX1-208ENST00000559844 KDM4EB2RXH2 506 aaPredicted RBP16.36■□□□□ 0.21
SNX1-208ENST00000559844 NPIPB9F8W1W9 429 aa16.36■□□□□ 0.21
SNX1-208ENST00000559844 CHP2O43745 196 aa16.36■□□□□ 0.21
SNX1-208ENST00000559844 GADD45AP24522 165 aa16.36■□□□□ 0.21
SNX1-208ENST00000559844 NCS1P62166 190 aa16.36■□□□□ 0.21
SNX1-208ENST00000559844 DSG2Q14126 1118 aa16.36■□□□□ 0.21
SNX1-208ENST00000559844 PGGHGQ32M88 737 aa16.36■□□□□ 0.21
SNX1-208ENST00000559844 ADCK1Q86TW2 530 aa16.36■□□□□ 0.21
SNX1-208ENST00000559844 OR2T33Q8NG76 320 aa16.36■□□□□ 0.21
SNX1-208ENST00000559844 RNF217Q8TC41 542 aa16.36■□□□□ 0.21
SNX1-208ENST00000559844 BRIX1Q8TDN6 353 aaKnown RBP16.36■□□□□ 0.21
SNX1-208ENST00000559844 DNAJB12Q9NXW2 375 aaKnown RBP16.36■□□□□ 0.21
SNX1-208ENST00000559844 A0A0B4J2E0 115 aa16.35■□□□□ 0.21
SNX1-208ENST00000559844 A0A1B0GX12 115 aa16.35■□□□□ 0.21
SNX1-208ENST00000559844 OR2W5A6NFC9 320 aa16.35■□□□□ 0.21
SNX1-208ENST00000559844 ADRA2AP08913 450 aa16.35■□□□□ 0.21
SNX1-208ENST00000559844 HSMCR30P0CW71 290 aa16.35■□□□□ 0.21
SNX1-208ENST00000559844 IFI30P13284 250 aa16.35■□□□□ 0.21
SNX1-208ENST00000559844 FBLP22087 321 aaKnown RBP16.35■□□□□ 0.21
SNX1-208ENST00000559844 RBM34P42696 430 aaKnown RBP16.35■□□□□ 0.21
SNX1-208ENST00000559844 OR1D4P47884 311 aa16.35■□□□□ 0.21
SNX1-208ENST00000559844 PLAURQ03405 335 aa16.35■□□□□ 0.21
SNX1-208ENST00000559844 RAB40BQ12829 278 aa16.35■□□□□ 0.21
SNX1-208ENST00000559844 MINDY4Q4G0A6 757 aa16.35■□□□□ 0.21
SNX1-208ENST00000559844 CLEC12AQ5QGZ9 265 aa16.35■□□□□ 0.21
SNX1-208ENST00000559844 TMPRSS11FQ6ZWK6 438 aa16.35■□□□□ 0.21
SNX1-208ENST00000559844 USP43Q70EL4 1123 aa16.35■□□□□ 0.21
SNX1-208ENST00000559844 BCDIN3DQ7Z5W3 292 aaKnown RBP16.35■□□□□ 0.21
SNX1-208ENST00000559844 NANOGP1Q8N7R0 232 aa16.35■□□□□ 0.21
SNX1-208ENST00000559844 BCORP1Q8N888 145 aa16.35■□□□□ 0.21
SNX1-208ENST00000559844 ANKK1Q8NFD2 765 aa16.35■□□□□ 0.21
SNX1-208ENST00000559844 PROKR2Q8NFJ6 384 aa16.35■□□□□ 0.21
SNX1-208ENST00000559844 OR4Q3Q8NH05 313 aa16.35■□□□□ 0.21
SNX1-208ENST00000559844 RPL3LQ92901 407 aaKnown RBP16.35■□□□□ 0.21
SNX1-208ENST00000559844 RFKQ969G6 155 aa16.35■□□□□ 0.21
SNX1-208ENST00000559844 VMP1Q96GC9 406 aa16.35■□□□□ 0.21
SNX1-208ENST00000559844 OR5M11Q96RB7 305 aa16.35■□□□□ 0.21
SNX1-208ENST00000559844 ZNF304Q9HCX3 659 aa16.35■□□□□ 0.21
SNX1-208ENST00000559844 TEX51A0A1B0GUA7 166 aa16.35■□□□□ 0.21
SNX1-208ENST00000559844 TRABD2BA6NFA1 517 aa16.35■□□□□ 0.21
SNX1-208ENST00000559844 CCRL2O00421 344 aa16.35■□□□□ 0.21
SNX1-208ENST00000559844 MYL12BO14950 172 aa16.35■□□□□ 0.21
SNX1-208ENST00000559844 SURF4O15260 269 aa16.35■□□□□ 0.21
SNX1-208ENST00000559844 CLPSP04118 112 aa16.35■□□□□ 0.21
SNX1-208ENST00000559844 RORAP35398 523 aa16.35■□□□□ 0.21
SNX1-208ENST00000559844 RNF144AP50876 292 aaPredicted RBP16.35■□□□□ 0.21
SNX1-208ENST00000559844 C1DQ13901 141 aaKnown RBP16.35■□□□□ 0.21
SNX1-208ENST00000559844 RTP5Q14D33 572 aa16.35■□□□□ 0.21
SNX1-208ENST00000559844 SLC30A6Q6NXT4 461 aa16.35■□□□□ 0.21
SNX1-208ENST00000559844 WDR88Q6ZMY6 472 aa16.35■□□□□ 0.21
SNX1-208ENST00000559844 TMEM151BQ8IW70 566 aa16.35■□□□□ 0.21
SNX1-208ENST00000559844 LSMEM1Q8N8F7 131 aa16.35■□□□□ 0.21
SNX1-208ENST00000559844 GALNT6Q8NCL4 622 aa16.35■□□□□ 0.21
SNX1-208ENST00000559844 KBTBD8Q8NFY9 601 aa16.35■□□□□ 0.21
SNX1-208ENST00000559844 OR52L1Q8NGH7 329 aa16.35■□□□□ 0.21
SNX1-208ENST00000559844 OR52I1Q8NGK6 324 aa16.35■□□□□ 0.21
SNX1-208ENST00000559844 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.35■□□□□ 0.21
SNX1-208ENST00000559844 NXPE2Q96DL1 559 aa16.35■□□□□ 0.21
SNX1-208ENST00000559844 B3GNT4Q9C0J1 378 aa16.35■□□□□ 0.21
SNX1-208ENST00000559844 HOXD1Q9GZZ0 328 aa16.35■□□□□ 0.21
SNX1-208ENST00000559844 FGF20Q9NP95 211 aaPredicted RBP16.35■□□□□ 0.21
SNX1-208ENST00000559844 ASCL3Q9NQ33 180 aa16.35■□□□□ 0.21
SNX1-208ENST00000559844 PNO1Q9NRX1 252 aaKnown RBP16.35■□□□□ 0.21
SNX1-208ENST00000559844 LSM2Q9Y333 95 aaKnown RBP16.35■□□□□ 0.21
SNX1-208ENST00000559844 IGKV3D-11A0A0A0MRZ8 115 aa16.34■□□□□ 0.21
SNX1-208ENST00000559844 CDRT15L2A8MXV6 281 aa16.34■□□□□ 0.21
SNX1-208ENST00000559844 MEN1O00255 615 aa16.34■□□□□ 0.21
SNX1-208ENST00000559844 RCBTB2O95199 551 aa16.34■□□□□ 0.21
SNX1-208ENST00000559844 NADKO95544 446 aaPredicted RBP16.34■□□□□ 0.21
SNX1-208ENST00000559844 SCG5P05408 212 aa16.34■□□□□ 0.21
SNX1-208ENST00000559844 CTBP2P56545 445 aa16.34■□□□□ 0.21
SNX1-208ENST00000559844 TSTQ16762 297 aaKnown RBP16.34■□□□□ 0.21
SNX1-208ENST00000559844 IGF2-ASQ6U949 168 aa16.34■□□□□ 0.21
SNX1-208ENST00000559844 ZNF440Q8IYI8 595 aa16.34■□□□□ 0.21
SNX1-208ENST00000559844 PTPMT1Q8WUK0 201 aaPredicted RBP16.34■□□□□ 0.21
SNX1-208ENST00000559844 SENP5Q96HI0 755 aaPredicted RBP16.34■□□□□ 0.21
SNX1-208ENST00000559844 DPH1Q9BZG8 443 aa16.34■□□□□ 0.21
SNX1-208ENST00000559844 CHCHD3Q9NX63 227 aaKnown RBP16.34■□□□□ 0.21
SNX1-208ENST00000559844 AKAP13Q12802 2813 aa16.34■□□□□ 0.21
SNX1-208ENST00000559844 A0A1B0GWA3 101 aa16.33■□□□□ 0.21
SNX1-208ENST00000559844 SYNDIG1LA6NDD5 238 aa16.33■□□□□ 0.21
SNX1-208ENST00000559844 CDC42EP2O14613 210 aa16.33■□□□□ 0.21
SNX1-208ENST00000559844 KLK3P07288 261 aaPredicted RBP16.33■□□□□ 0.21
SNX1-208ENST00000559844 ADRB1P08588 477 aa16.33■□□□□ 0.21
SNX1-208ENST00000559844 BMP7P18075 431 aa16.33■□□□□ 0.21
SNX1-208ENST00000559844 MYL12AP19105 171 aa16.33■□□□□ 0.21
SNX1-208ENST00000559844 CALRP27797 417 aaKnown RBP16.33■□□□□ 0.21
SNX1-208ENST00000559844 GRK5P34947 590 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms