RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 CBFBQ13951 182 aa11.58□□□□□ -0.56
TPM1-220ENST00000559556 QPRTQ15274 297 aa11.58□□□□□ -0.56
TPM1-220ENST00000559556 NRF1Q16656 503 aa11.58□□□□□ -0.56
TPM1-220ENST00000559556 TIMM23BQ5SRD1 257 aa11.58□□□□□ -0.56
TPM1-220ENST00000559556 ABLIM2Q6H8Q1 611 aa11.58□□□□□ -0.56
TPM1-220ENST00000559556 P2RY8Q86VZ1 359 aa11.58□□□□□ -0.56
TPM1-220ENST00000559556 C4orf33Q8N1A6 199 aa11.58□□□□□ -0.56
TPM1-220ENST00000559556 NATD1Q8N6N6 113 aa11.58□□□□□ -0.56
TPM1-220ENST00000559556 TMCO5AQ8N6Q1 288 aa11.58□□□□□ -0.56
TPM1-220ENST00000559556 ZNF614Q8N883 585 aa11.58□□□□□ -0.56
TPM1-220ENST00000559556 ATP6V1C2Q8NEY4 427 aa11.58□□□□□ -0.56
TPM1-220ENST00000559556 OR5W2Q8NH69 310 aa11.58□□□□□ -0.56
TPM1-220ENST00000559556 EPS8L3Q8TE67 593 aaKnown RBP11.58□□□□□ -0.56
TPM1-220ENST00000559556 ST8SIA1Q92185 356 aa11.58□□□□□ -0.56
TPM1-220ENST00000559556 ZNF75CPQ92670 426 aaPredicted RBP11.58□□□□□ -0.56
TPM1-220ENST00000559556 MOAP1Q96BY2 351 aa11.58□□□□□ -0.56
TPM1-220ENST00000559556 PPP3R2Q96LZ3 170 aa11.58□□□□□ -0.56
TPM1-220ENST00000559556 HS6ST2Q96MM7 605 aa11.58□□□□□ -0.56
TPM1-220ENST00000559556 OR7D2Q96RA2 312 aa11.58□□□□□ -0.56
TPM1-220ENST00000559556 ZNF300Q96RE9 604 aaPredicted RBP11.58□□□□□ -0.56
TPM1-220ENST00000559556 RHOXF2Q9BQY4 288 aa11.58□□□□□ -0.56
TPM1-220ENST00000559556 NMUR2Q9GZQ4 415 aa11.58□□□□□ -0.56
TPM1-220ENST00000559556 ALG2Q9H553 416 aa11.58□□□□□ -0.56
TPM1-220ENST00000559556 NPAP1Q9NZP6 1156 aa11.58□□□□□ -0.56
TPM1-220ENST00000559556 GIMAP2Q9UG22 337 aa11.58□□□□□ -0.56
TPM1-220ENST00000559556 GDF2Q9UK05 429 aaPredicted RBP11.58□□□□□ -0.56
TPM1-220ENST00000559556 DYSFO75923 2080 aa11.57□□□□□ -0.56
TPM1-220ENST00000559556 A0A096LNT2 108 aa11.57□□□□□ -0.56
TPM1-220ENST00000559556 SMIM23A6NLE4 172 aa11.57□□□□□ -0.56
TPM1-220ENST00000559556 ABCD4O14678 606 aa11.57□□□□□ -0.56
TPM1-220ENST00000559556 ADAM11O75078 769 aa11.57□□□□□ -0.56
TPM1-220ENST00000559556 LYPLA1O75608 230 aaPredicted RBP11.57□□□□□ -0.56
TPM1-220ENST00000559556 PGM3O95394 542 aa11.57□□□□□ -0.56
TPM1-220ENST00000559556 C6orf47O95873 294 aa11.57□□□□□ -0.56
TPM1-220ENST00000559556 IGHV1-2P23083 117 aa11.57□□□□□ -0.56
TPM1-220ENST00000559556 CCR4P51679 360 aa11.57□□□□□ -0.56
TPM1-220ENST00000559556 STK11Q15831 433 aa11.57□□□□□ -0.56
TPM1-220ENST00000559556 LSM12Q3MHD2 195 aaKnown RBP11.57□□□□□ -0.56
TPM1-220ENST00000559556 TIGD2Q4W5G0 525 aa11.57□□□□□ -0.56
TPM1-220ENST00000559556 PDZK1Q5T2W1 519 aa11.57□□□□□ -0.56
TPM1-220ENST00000559556 C11orf71Q6IPW1 123 aa11.57□□□□□ -0.56
TPM1-220ENST00000559556 HMBOX1Q6NT76 420 aa11.57□□□□□ -0.56
TPM1-220ENST00000559556 PODNL1Q6PEZ8 512 aa11.57□□□□□ -0.56
TPM1-220ENST00000559556 RIMKLAQ8IXN7 391 aa11.57□□□□□ -0.56
TPM1-220ENST00000559556 ZNF433Q8N7K0 673 aaPredicted RBP11.57□□□□□ -0.56
TPM1-220ENST00000559556 EIF1ADQ8N9N8 165 aaKnown RBP11.57□□□□□ -0.56
TPM1-220ENST00000559556 RFWD2Q8NHY2 731 aa11.57□□□□□ -0.56
TPM1-220ENST00000559556 UBLCP1Q8WVY7 318 aaPredicted RBP11.57□□□□□ -0.56
TPM1-220ENST00000559556 COQ8BQ96D53 544 aa11.57□□□□□ -0.56
TPM1-220ENST00000559556 MUCL1Q96DR8 90 aa11.57□□□□□ -0.56
TPM1-220ENST00000559556 APOPT1Q96IL0 206 aa11.57□□□□□ -0.56
TPM1-220ENST00000559556 SDF2Q99470 211 aa11.57□□□□□ -0.56
TPM1-220ENST00000559556 CISD1Q9NZ45 108 aaKnown RBP11.57□□□□□ -0.56
TPM1-220ENST00000559556 TRAF6Q9Y4K3 522 aa11.57□□□□□ -0.56
TPM1-220ENST00000559556 IGKV3D-15A0A087WSY6 115 aa11.56□□□□□ -0.56
TPM1-220ENST00000559556 OR5H1A6NKK0 313 aa11.56□□□□□ -0.56
TPM1-220ENST00000559556 GGT1P19440 569 aa11.56□□□□□ -0.56
TPM1-220ENST00000559556 DIO1P49895 249 aa11.56□□□□□ -0.56
TPM1-220ENST00000559556 C21orf58P58505 322 aa11.56□□□□□ -0.56
TPM1-220ENST00000559556 ZNF141Q15928 474 aa11.56□□□□□ -0.56
TPM1-220ENST00000559556 SPDYE7PQ495Y7 208 aa11.56□□□□□ -0.56
TPM1-220ENST00000559556 ATP6AP1LQ52LC2 224 aa11.56□□□□□ -0.56
TPM1-220ENST00000559556 ARL13AQ5H913 290 aaPredicted RBP11.56□□□□□ -0.56
TPM1-220ENST00000559556 C6orf136Q5SQH8 315 aa11.56□□□□□ -0.56
TPM1-220ENST00000559556 KRTCAP2Q8N6L1 136 aa11.56□□□□□ -0.56
TPM1-220ENST00000559556 OR5D16Q8NGK9 328 aa11.56□□□□□ -0.56
TPM1-220ENST00000559556 OR5AK3PQ8NH89 298 aa11.56□□□□□ -0.56
TPM1-220ENST00000559556 KIF18AQ8NI77 898 aa11.56□□□□□ -0.56
TPM1-220ENST00000559556 SLC25A43Q8WUT9 341 aaPredicted RBP11.56□□□□□ -0.56
TPM1-220ENST00000559556 ARL8AQ96BM9 186 aa11.56□□□□□ -0.56
TPM1-220ENST00000559556 RADILQ96JH8 1075 aa11.56□□□□□ -0.56
TPM1-220ENST00000559556 C3orf30Q96M34 536 aa11.56□□□□□ -0.56
TPM1-220ENST00000559556 OR5B2Q96R09 309 aa11.56□□□□□ -0.56
TPM1-220ENST00000559556 C1orf50Q9BV19 199 aa11.56□□□□□ -0.56
TPM1-220ENST00000559556 BHLHE41Q9C0J9 482 aaPredicted RBP11.56□□□□□ -0.56
TPM1-220ENST00000559556 LAT2Q9GZY6 243 aa11.56□□□□□ -0.56
TPM1-220ENST00000559556 SERHL2Q9H4I8 314 aa11.56□□□□□ -0.56
TPM1-220ENST00000559556 EML4Q9HC35 981 aaKnown RBP11.56□□□□□ -0.56
TPM1-220ENST00000559556 KCNE5Q9UJ90 142 aa11.56□□□□□ -0.56
TPM1-220ENST00000559556 IGHV4-30-2A0A087WSY4 118 aa11.55□□□□□ -0.56
TPM1-220ENST00000559556 CENPVL1A0A0U1RR11 272 aa11.55□□□□□ -0.56
TPM1-220ENST00000559556 SERINC4A6NH21 518 aa11.55□□□□□ -0.56
TPM1-220ENST00000559556 PEX11AO75192 247 aa11.55□□□□□ -0.56
TPM1-220ENST00000559556 AK1P00568 194 aa11.55□□□□□ -0.56
TPM1-220ENST00000559556 IFNA2P01563 188 aa11.55□□□□□ -0.56
TPM1-220ENST00000559556 PRPS1L1P21108 318 aa11.55□□□□□ -0.56
TPM1-220ENST00000559556 ALDH3A1P30838 453 aa11.55□□□□□ -0.56
TPM1-220ENST00000559556 SESN3P58005 492 aa11.55□□□□□ -0.56
TPM1-220ENST00000559556 CSNK2A1P68400 391 aaPredicted RBP11.55□□□□□ -0.56
TPM1-220ENST00000559556 HBA1P69905 142 aa11.55□□□□□ -0.56
TPM1-220ENST00000559556 PDK3Q15120 406 aa11.55□□□□□ -0.56
TPM1-220ENST00000559556 SYT14P1Q58G82 188 aa11.55□□□□□ -0.56
TPM1-220ENST00000559556 AGAP6Q5VW22 663 aa11.55□□□□□ -0.56
TPM1-220ENST00000559556 BHLHB9Q6PI77 547 aa11.55□□□□□ -0.56
TPM1-220ENST00000559556 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.55□□□□□ -0.56
TPM1-220ENST00000559556 GALNT5Q7Z7M9 940 aa11.55□□□□□ -0.56
TPM1-220ENST00000559556 PHC2Q8IXK0 858 aa11.55□□□□□ -0.56
TPM1-220ENST00000559556 FAM71CQ8NEG0 241 aa11.55□□□□□ -0.56
TPM1-220ENST00000559556 AGR3Q8TD06 166 aa11.55□□□□□ -0.56
TPM1-220ENST00000559556 TMEM234Q8WY98 164 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms