RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 ZNF311Q5JNZ3 666 aa2.16□□□□□ -2.06
VPS13C-207ENST00000558919 TOR1AIP1Q5JTV8 583 aa2.16□□□□□ -2.06
VPS13C-207ENST00000558919 PAGE3Q5JUK9 113 aa2.16□□□□□ -2.06
VPS13C-207ENST00000558919 C1orf146Q5VVC0 180 aa2.16□□□□□ -2.06
VPS13C-207ENST00000558919 RAET1GQ6H3X3 334 aa2.16□□□□□ -2.06
VPS13C-207ENST00000558919 ACSM5Q6NUN0 579 aa2.16□□□□□ -2.06
VPS13C-207ENST00000558919 NIPAL3Q6P499 406 aa2.16□□□□□ -2.06
VPS13C-207ENST00000558919 LRRC8BQ6P9F7 803 aa2.16□□□□□ -2.06
VPS13C-207ENST00000558919 SYT10Q6XYQ8 523 aa2.16□□□□□ -2.06
VPS13C-207ENST00000558919 RBM43Q6ZSC3 357 aaKnown RBP2.16□□□□□ -2.06
VPS13C-207ENST00000558919 LINC01551Q86U37 167 aa2.16□□□□□ -2.06
VPS13C-207ENST00000558919 TMEM17Q86X19 198 aa2.16□□□□□ -2.06
VPS13C-207ENST00000558919 SVOPLQ8N434 492 aa2.16□□□□□ -2.06
VPS13C-207ENST00000558919 MRPL43Q8N983 215 aaKnown RBP2.16□□□□□ -2.06
VPS13C-207ENST00000558919 OR52B4Q8NGK2 314 aa2.16□□□□□ -2.06
VPS13C-207ENST00000558919 NANPQ8TBE9 248 aa2.16□□□□□ -2.06
VPS13C-207ENST00000558919 PAQR8Q8TEZ7 354 aa2.16□□□□□ -2.06
VPS13C-207ENST00000558919 CCDC47Q96A33 483 aaKnown RBP2.16□□□□□ -2.06
VPS13C-207ENST00000558919 AKR1E2Q96JD6 320 aa2.16□□□□□ -2.06
VPS13C-207ENST00000558919 VPS35Q96QK1 796 aa2.16□□□□□ -2.06
VPS13C-207ENST00000558919 VCXQ9H320 206 aa2.16□□□□□ -2.06
VPS13C-207ENST00000558919 SLC25A22Q9H936 323 aa2.16□□□□□ -2.06
VPS13C-207ENST00000558919 AIG1Q9NVV5 245 aa2.16□□□□□ -2.06
VPS13C-207ENST00000558919 WARS2Q9UGM6 360 aaKnown RBP2.16□□□□□ -2.06
VPS13C-207ENST00000558919 MGAT4BQ9UQ53 548 aa2.16□□□□□ -2.06
VPS13C-207ENST00000558919 GPRASP1Q5JY77 1395 aa2.15□□□□□ -2.07
VPS13C-207ENST00000558919 IGLV4-69A0A075B6H9 119 aa2.15□□□□□ -2.07
VPS13C-207ENST00000558919 RNF103-CHMP3A0A140T963 221 aa2.15□□□□□ -2.07
VPS13C-207ENST00000558919 ESYT2A0FGR8 921 aa2.15□□□□□ -2.07
VPS13C-207ENST00000558919 GFYI3L273 518 aa2.15□□□□□ -2.07
VPS13C-207ENST00000558919 VPS26AO75436 327 aa2.15□□□□□ -2.07
VPS13C-207ENST00000558919 IGF1P05019 195 aa2.15□□□□□ -2.07
VPS13C-207ENST00000558919 PCCAP05165 728 aaPredicted RBP2.15□□□□□ -2.07
VPS13C-207ENST00000558919 ADRB3P13945 408 aa2.15□□□□□ -2.07
VPS13C-207ENST00000558919 FUT1P19526 365 aa2.15□□□□□ -2.07
VPS13C-207ENST00000558919 DNAJB1P25685 340 aa2.15□□□□□ -2.07
VPS13C-207ENST00000558919 KIF5BP33176 963 aa2.15□□□□□ -2.07
VPS13C-207ENST00000558919 ATP6V1E1P36543 226 aa2.15□□□□□ -2.07
VPS13C-207ENST00000558919 MAGEA5P43359 124 aa2.15□□□□□ -2.07
VPS13C-207ENST00000558919 HNRNPA3P51991 378 aaKnown RBP2.15□□□□□ -2.07
VPS13C-207ENST00000558919 PAX5Q02548 391 aa2.15□□□□□ -2.07
VPS13C-207ENST00000558919 TRIP10Q15642 601 aa2.15□□□□□ -2.07
VPS13C-207ENST00000558919 TSPO2Q5TGU0 170 aa2.15□□□□□ -2.07
VPS13C-207ENST00000558919 C16orf62Q7Z3J2 963 aa2.15□□□□□ -2.07
VPS13C-207ENST00000558919 MISPQ8IVT2 679 aa2.15□□□□□ -2.07
VPS13C-207ENST00000558919 SAXO1Q8IYX7 474 aa2.15□□□□□ -2.07
VPS13C-207ENST00000558919 NKAPP1Q8N9T2 125 aa2.15□□□□□ -2.07
VPS13C-207ENST00000558919 MRPL38Q96DV4 380 aaKnown RBP2.15□□□□□ -2.07
VPS13C-207ENST00000558919 PGLYRP4Q96LB8 373 aa2.15□□□□□ -2.07
VPS13C-207ENST00000558919 FICDQ9BVA6 458 aa2.15□□□□□ -2.07
VPS13C-207ENST00000558919 NAT10Q9H0A0 1025 aaKnown RBP2.15□□□□□ -2.07
VPS13C-207ENST00000558919 RHOJQ9H4E5 214 aa2.15□□□□□ -2.07
VPS13C-207ENST00000558919 DHX33Q9H6R0 707 aaKnown RBP2.15□□□□□ -2.07
VPS13C-207ENST00000558919 ASF1AQ9Y294 204 aa2.15□□□□□ -2.07
VPS13C-207ENST00000558919 TP53TG5Q9Y2B4 290 aa2.15□□□□□ -2.07
VPS13C-207ENST00000558919 A0A0G2JRQ6 117 aa2.14□□□□□ -2.07
VPS13C-207ENST00000558919 A0A0U1RQV5 110 aa2.14□□□□□ -2.07
VPS13C-207ENST00000558919 KRTAP4-16G5E9R7 235 aaPredicted RBP2.14□□□□□ -2.07
VPS13C-207ENST00000558919 SDHDO14521 159 aa2.14□□□□□ -2.07
VPS13C-207ENST00000558919 FAM189A1O60320 539 aa2.14□□□□□ -2.07
VPS13C-207ENST00000558919 B3GAT3O94766 335 aa2.14□□□□□ -2.07
VPS13C-207ENST00000558919 GNA14O95837 355 aa2.14□□□□□ -2.07
VPS13C-207ENST00000558919 F10P00742 488 aa2.14□□□□□ -2.07
VPS13C-207ENST00000558919 ZNF44P15621 663 aa2.14□□□□□ -2.07
VPS13C-207ENST00000558919 IL10P22301 178 aa2.14□□□□□ -2.07
VPS13C-207ENST00000558919 CALB2P22676 271 aa2.14□□□□□ -2.07
VPS13C-207ENST00000558919 MTTPP55157 894 aa2.14□□□□□ -2.07
VPS13C-207ENST00000558919 PRPS1P60891 318 aa2.14□□□□□ -2.07
VPS13C-207ENST00000558919 MAP2K1Q02750 393 aaPredicted RBP2.14□□□□□ -2.07
VPS13C-207ENST00000558919 EIF4EBP1Q13541 118 aaPredicted RBP2.14□□□□□ -2.07
VPS13C-207ENST00000558919 SLC5A12Q1EHB4 618 aa2.14□□□□□ -2.07
VPS13C-207ENST00000558919 GCNT2Q8N0V5 402 aa2.14□□□□□ -2.07
VPS13C-207ENST00000558919 HDDC3Q8N4P3 179 aa2.14□□□□□ -2.07
VPS13C-207ENST00000558919 ARL10Q8N8L6 244 aa2.14□□□□□ -2.07
VPS13C-207ENST00000558919 GPATCH11Q8N954 259 aa2.14□□□□□ -2.07
VPS13C-207ENST00000558919 ZNF540Q8NDQ6 660 aa2.14□□□□□ -2.07
VPS13C-207ENST00000558919 OR8H1Q8NGG4 311 aa2.14□□□□□ -2.07
VPS13C-207ENST00000558919 UBE2Q2Q8WVN8 375 aa2.14□□□□□ -2.07
VPS13C-207ENST00000558919 FAM151AQ8WW52 585 aa2.14□□□□□ -2.07
VPS13C-207ENST00000558919 CHCHD10Q8WYQ3 142 aaPredicted RBP2.14□□□□□ -2.07
VPS13C-207ENST00000558919 PIGCQ92535 297 aa2.14□□□□□ -2.07
VPS13C-207ENST00000558919 KLHDC3Q9BQ90 382 aa2.14□□□□□ -2.07
VPS13C-207ENST00000558919 PLGRKTQ9HBL7 147 aa2.14□□□□□ -2.07
VPS13C-207ENST00000558919 C6orf203Q9P0P8 240 aaPredicted RBP2.14□□□□□ -2.07
VPS13C-207ENST00000558919 MTRF1LQ9UGC7 380 aaKnown RBP2.14□□□□□ -2.07
VPS13C-207ENST00000558919 NUFIP1Q9UHK0 495 aaKnown RBP2.14□□□□□ -2.07
VPS13C-207ENST00000558919 IGHV2-70DA0A0C4DH43 119 aa2.13□□□□□ -2.07
VPS13C-207ENST00000558919 IGHV3-64DA0A0J9YX35 117 aa2.13□□□□□ -2.07
VPS13C-207ENST00000558919 LRCOL1A6NCL2 159 aa2.13□□□□□ -2.07
VPS13C-207ENST00000558919 E7ESA3 106 aa2.13□□□□□ -2.07
VPS13C-207ENST00000558919 TMX2-CTNND1H3BSU7 103 aa2.13□□□□□ -2.07
VPS13C-207ENST00000558919 PES1O00541 588 aaKnown RBP2.13□□□□□ -2.07
VPS13C-207ENST00000558919 DLGAP1O14490 977 aa2.13□□□□□ -2.07
VPS13C-207ENST00000558919 SEC22BO75396 215 aa2.13□□□□□ -2.07
VPS13C-207ENST00000558919 CYP2B6P20813 491 aa2.13□□□□□ -2.07
VPS13C-207ENST00000558919 MAGP20916 626 aa2.13□□□□□ -2.07
VPS13C-207ENST00000558919 PAICSP22234 425 aaKnown RBP2.13□□□□□ -2.07
VPS13C-207ENST00000558919 ADRA1AP35348 466 aa2.13□□□□□ -2.07
VPS13C-207ENST00000558919 ARL6IP1Q15041 203 aa2.13□□□□□ -2.07
VPS13C-207ENST00000558919 SHHQ15465 462 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms