RNA–Protein interactions for RNA: ENST00000558285.5

USP3-208, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best) BASIC

Gene USP3, Length 1,742 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-208ENST00000558285 WDR45Q9Y484 360 aa7.85□□□□□ -1.15
USP3-208ENST00000558285 FAM215AQ9Y5M1 114 aa7.85□□□□□ -1.15
USP3-208ENST00000558285 TENM4Q6N022 2769 aa7.85□□□□□ -1.15
USP3-208ENST00000558285 USP9YO00507 2555 aaPredicted RBP7.85□□□□□ -1.15
USP3-208ENST00000558285 HECTD1Q9ULT8 2610 aa7.84□□□□□ -1.15
USP3-208ENST00000558285 FAM234BA2RU67 622 aa7.84□□□□□ -1.15
USP3-208ENST00000558285 CCDC160A6NGH7 325 aa7.84□□□□□ -1.15
USP3-208ENST00000558285 H3BML4 177 aa7.84□□□□□ -1.15
USP3-208ENST00000558285 ANKRD28O15084 1053 aa7.84□□□□□ -1.15
USP3-208ENST00000558285 ZNF264O43296 627 aa7.84□□□□□ -1.15
USP3-208ENST00000558285 TNFRSF21O75509 655 aa7.84□□□□□ -1.15
USP3-208ENST00000558285 TPPPO94811 219 aa7.84□□□□□ -1.15
USP3-208ENST00000558285 RNF224P0DH78 156 aa7.84□□□□□ -1.15
USP3-208ENST00000558285 ZNF708P17019 499 aa7.84□□□□□ -1.15
USP3-208ENST00000558285 CDH2P19022 906 aaPredicted RBP7.84□□□□□ -1.15
USP3-208ENST00000558285 PGCP20142 388 aa7.84□□□□□ -1.15
USP3-208ENST00000558285 EFNA1P20827 205 aaPredicted RBP7.84□□□□□ -1.15
USP3-208ENST00000558285 BMP5P22003 454 aa7.84□□□□□ -1.15
USP3-208ENST00000558285 FUT4P22083 530 aa7.84□□□□□ -1.15
USP3-208ENST00000558285 SOX18P35713 384 aa7.84□□□□□ -1.15
USP3-208ENST00000558285 P2RX1P51575 399 aa7.84□□□□□ -1.15
USP3-208ENST00000558285 POLR2JP52435 117 aaKnown RBP7.84□□□□□ -1.15
USP3-208ENST00000558285 GAS1P54826 345 aa7.84□□□□□ -1.15
USP3-208ENST00000558285 GFRA1P56159 465 aa7.84□□□□□ -1.15
USP3-208ENST00000558285 MYBPHQ13203 477 aa7.84□□□□□ -1.15
USP3-208ENST00000558285 PRSS53Q2L4Q9 553 aa7.84□□□□□ -1.15
USP3-208ENST00000558285 GPAT3Q53EU6 434 aa7.84□□□□□ -1.15
USP3-208ENST00000558285 C6orf10Q5SRN2 563 aa7.84□□□□□ -1.15
USP3-208ENST00000558285 C1orf146Q5VVC0 180 aa7.84□□□□□ -1.15
USP3-208ENST00000558285 ESPNLQ6ZVH7 1005 aa7.84□□□□□ -1.15
USP3-208ENST00000558285 STK32CQ86UX6 486 aa7.84□□□□□ -1.15
USP3-208ENST00000558285 ZNF440Q8IYI8 595 aa7.84□□□□□ -1.15
USP3-208ENST00000558285 GTPBP8Q8N3Z3 284 aaPredicted RBP7.84□□□□□ -1.15
USP3-208ENST00000558285 OR5AK3PQ8NH89 298 aa7.84□□□□□ -1.15
USP3-208ENST00000558285 XAGE5Q8WWM1 108 aa7.84□□□□□ -1.15
USP3-208ENST00000558285 RNASE6Q93091 150 aaKnown RBP7.84□□□□□ -1.15
USP3-208ENST00000558285 C14orf79Q96F83 325 aa7.84□□□□□ -1.15
USP3-208ENST00000558285 C16orf58Q96GQ5 468 aa7.84□□□□□ -1.15
USP3-208ENST00000558285 MAELQ96JY0 434 aaKnown RBP7.84□□□□□ -1.15
USP3-208ENST00000558285 ZNF559Q9BR84 538 aa7.84□□□□□ -1.15
USP3-208ENST00000558285 SLC39A3Q9BRY0 314 aa7.84□□□□□ -1.15
USP3-208ENST00000558285 C20orf27Q9GZN8 174 aa7.84□□□□□ -1.15
USP3-208ENST00000558285 WDR55Q9H6Y2 383 aaPredicted RBP7.84□□□□□ -1.15
USP3-208ENST00000558285 ZNF395Q9H8N7 513 aaPredicted RBP7.84□□□□□ -1.15
USP3-208ENST00000558285 SDR39U1Q9NRG7 319 aaPredicted RBP7.84□□□□□ -1.15
USP3-208ENST00000558285 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.84□□□□□ -1.15
USP3-208ENST00000558285 EMC9Q9Y3B6 208 aa7.84□□□□□ -1.15
USP3-208ENST00000558285 GPR45Q9Y5Y3 372 aa7.84□□□□□ -1.15
USP3-208ENST00000558285 USP9XQ93008 2570 aaPredicted RBP7.84□□□□□ -1.15
USP3-208ENST00000558285 ASH1LQ9NR48 2969 aaKnown RBP7.84□□□□□ -1.15
USP3-208ENST00000558285 MYO7BQ6PIF6 2116 aa7.84□□□□□ -1.15
USP3-208ENST00000558285 A0A0G2JNJ9 132 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 CLCA1A8K7I4 914 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 H0YJX3 145 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 RCBTB2O95199 551 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 CSTAP01040 98 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 OCM2P0CE71 109 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 OCMP0CE72 109 aaPredicted RBP7.83□□□□□ -1.16
USP3-208ENST00000558285 NR2F1P10589 423 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 ZNF23P17027 643 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 PRDX6P30041 224 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 UQCRC1P31930 480 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 CEACAM8P31997 349 aaPredicted RBP7.83□□□□□ -1.16
USP3-208ENST00000558285 HTR3AP46098 478 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 CCR4P51679 360 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 RAC1P63000 192 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 GPR68Q15743 365 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 FAM219BQ5XKK7 198 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 SAXO2Q658L1 398 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 BRICD5Q6PL45 260 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 EPGNQ6UW88 154 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 ANKRD46Q86W74 232 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 CCDC71Q8IV32 467 aaPredicted RBP7.83□□□□□ -1.16
USP3-208ENST00000558285 UBQLNLQ8IYU4 475 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 CLECL1Q8IZS7 167 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 ZNF619Q8N2I2 560 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 OR4C3Q8NH37 302 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 SLC25A43Q8WUT9 341 aaPredicted RBP7.83□□□□□ -1.16
USP3-208ENST00000558285 ZHX1-C8orf76Q96EF9 292 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 MRGPRX4Q96LA9 322 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 TRNT1Q96Q11 434 aaKnown RBP7.83□□□□□ -1.16
USP3-208ENST00000558285 OR51I1Q9H343 314 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 TPK1Q9H3S4 243 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 GID8Q9NWU2 228 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 P2RX2Q9UBL9 471 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 TNFRSF10DQ9UBN6 386 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 Q9UFV3 132 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 TAGLN3Q9UI15 199 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 PACSIN3Q9UKS6 424 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 VDAC3Q9Y277 283 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 CEPT1Q9Y6K0 416 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 FLNCQ14315 2725 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 OR2M5A3KFT3 312 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 SERINC4A6NH21 518 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 EVPLLA8MZ36 301 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 EEF1E1-BLOC1S5C9J1V9 151 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 C5orf58C9J3I9 102 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 SYT5O00445 386 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 CASKO14936 926 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 SEC14L5O43304 696 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms