RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 VLDLRP98155 873 aa4.96□□□□□ -1.62
RTF1-204ENST00000558117 RBBP7Q16576 425 aa4.96□□□□□ -1.62
RTF1-204ENST00000558117 TMEM30BQ3MIR4 351 aa4.96□□□□□ -1.62
RTF1-204ENST00000558117 CBWD6Q4V339 395 aa4.96□□□□□ -1.62
RTF1-204ENST00000558117 CBWD3Q5JTY5 395 aa4.96□□□□□ -1.62
RTF1-204ENST00000558117 C6orf136Q5SQH8 315 aa4.96□□□□□ -1.62
RTF1-204ENST00000558117 RAET1GQ6H3X3 334 aa4.96□□□□□ -1.62
RTF1-204ENST00000558117 DHRS7BQ6IAN0 325 aaPredicted RBP4.96□□□□□ -1.62
RTF1-204ENST00000558117 OR10S1Q8NGN2 331 aa4.96□□□□□ -1.62
RTF1-204ENST00000558117 DNAJC19Q96DA6 116 aa4.96□□□□□ -1.62
RTF1-204ENST00000558117 LGALS12Q96DT0 336 aa4.96□□□□□ -1.62
RTF1-204ENST00000558117 SLC47A1Q96FL8 570 aa4.96□□□□□ -1.62
RTF1-204ENST00000558117 DTD2Q96FN9 168 aa4.96□□□□□ -1.62
RTF1-204ENST00000558117 COX14Q96I36 57 aa4.96□□□□□ -1.62
RTF1-204ENST00000558117 EGFL8Q99944 293 aa4.96□□□□□ -1.62
RTF1-204ENST00000558117 CRACR2AQ9BSW2 395 aa4.96□□□□□ -1.62
RTF1-204ENST00000558117 ANP32EQ9BTT0 268 aa4.96□□□□□ -1.62
RTF1-204ENST00000558117 TRAF4Q9BUZ4 470 aaPredicted RBP4.96□□□□□ -1.62
RTF1-204ENST00000558117 ATG10Q9H0Y0 220 aa4.96□□□□□ -1.62
RTF1-204ENST00000558117 DPAGT1Q9H3H5 408 aa4.96□□□□□ -1.62
RTF1-204ENST00000558117 GOLPH3LQ9H4A5 285 aa4.96□□□□□ -1.62
RTF1-204ENST00000558117 IARS2Q9NSE4 1012 aaKnown RBP4.96□□□□□ -1.62
RTF1-204ENST00000558117 EXTL2Q9UBQ6 330 aa4.96□□□□□ -1.62
RTF1-204ENST00000558117 B4GALT7Q9UBV7 327 aa4.96□□□□□ -1.62
RTF1-204ENST00000558117 SNX10Q9Y5X0 201 aa4.96□□□□□ -1.62
RTF1-204ENST00000558117 CPAMD8Q8IZJ3 1885 aa4.96□□□□□ -1.62
RTF1-204ENST00000558117 MALRD1Q5VYJ5 2156 aa4.95□□□□□ -1.62
RTF1-204ENST00000558117 DNAH3Q8TD57 4116 aa4.95□□□□□ -1.62
RTF1-204ENST00000558117 IGLV3-10A0A075B6K4 115 aa4.95□□□□□ -1.62
RTF1-204ENST00000558117 SMIM30A4D0T7 59 aa4.95□□□□□ -1.62
RTF1-204ENST00000558117 OR52A4PA6NMU1 304 aa4.95□□□□□ -1.62
RTF1-204ENST00000558117 LETM1O95202 739 aaPredicted RBP4.95□□□□□ -1.62
RTF1-204ENST00000558117 IGSF6O95976 241 aa4.95□□□□□ -1.62
RTF1-204ENST00000558117 VPREB1P12018 145 aa4.95□□□□□ -1.62
RTF1-204ENST00000558117 ADRA2CP18825 462 aa4.95□□□□□ -1.62
RTF1-204ENST00000558117 KPNA2P52292 529 aaKnown RBP4.95□□□□□ -1.62
RTF1-204ENST00000558117 NAGLUP54802 743 aa4.95□□□□□ -1.62
RTF1-204ENST00000558117 SNU13P55769 128 aaKnown RBP4.95□□□□□ -1.62
RTF1-204ENST00000558117 MESDQ14696 234 aa4.95□□□□□ -1.62
RTF1-204ENST00000558117 PDK1Q15118 436 aa4.95□□□□□ -1.62
RTF1-204ENST00000558117 TRADDQ15628 312 aa4.95□□□□□ -1.62
RTF1-204ENST00000558117 SNAPC1Q16533 368 aa4.95□□□□□ -1.62
RTF1-204ENST00000558117 CMPK2Q5EBM0 449 aa4.95□□□□□ -1.62
RTF1-204ENST00000558117 C6orf163Q5TEZ5 329 aa4.95□□□□□ -1.62
RTF1-204ENST00000558117 TXNRD3NBQ6F5E7 133 aa4.95□□□□□ -1.62
RTF1-204ENST00000558117 SPINK14Q6IE38 97 aa4.95□□□□□ -1.62
RTF1-204ENST00000558117 FAM53AQ6NSI3 398 aaPredicted RBP4.95□□□□□ -1.62
RTF1-204ENST00000558117 ZCCHC12Q6PEW1 402 aa4.95□□□□□ -1.62
RTF1-204ENST00000558117 CORO6Q6QEF8 472 aa4.95□□□□□ -1.62
RTF1-204ENST00000558117 SHISA6Q6ZSJ9 500 aa4.95□□□□□ -1.62
RTF1-204ENST00000558117 TMEM110Q86TL2 294 aa4.95□□□□□ -1.62
RTF1-204ENST00000558117 ADCK1Q86TW2 530 aa4.95□□□□□ -1.62
RTF1-204ENST00000558117 C8orf44Q96CB5 159 aa4.95□□□□□ -1.62
RTF1-204ENST00000558117 MTERF3Q96E29 417 aa4.95□□□□□ -1.62
RTF1-204ENST00000558117 ZNF641Q96N77 438 aaPredicted RBP4.95□□□□□ -1.62
RTF1-204ENST00000558117 FAM111AQ96PZ2 611 aa4.95□□□□□ -1.62
RTF1-204ENST00000558117 OLFM1Q99784 485 aa4.95□□□□□ -1.62
RTF1-204ENST00000558117 RHNO1Q9BSD3 238 aa4.95□□□□□ -1.62
RTF1-204ENST00000558117 ZNF350Q9GZX5 532 aa4.95□□□□□ -1.62
RTF1-204ENST00000558117 MIS12Q9H081 205 aa4.95□□□□□ -1.62
RTF1-204ENST00000558117 ABCG8Q9H221 673 aa4.95□□□□□ -1.62
RTF1-204ENST00000558117 MMP27Q9H306 513 aa4.95□□□□□ -1.62
RTF1-204ENST00000558117 WDR54Q9H977 334 aa4.95□□□□□ -1.62
RTF1-204ENST00000558117 FN3KRPQ9HA64 309 aa4.95□□□□□ -1.62
RTF1-204ENST00000558117 AGPAT3Q9NRZ7 376 aa4.95□□□□□ -1.62
RTF1-204ENST00000558117 CISHQ9NSE2 258 aa4.95□□□□□ -1.62
RTF1-204ENST00000558117 PNPLA3Q9NST1 481 aa4.95□□□□□ -1.62
RTF1-204ENST00000558117 SLC7A7Q9UM01 511 aa4.95□□□□□ -1.62
RTF1-204ENST00000558117 RAI1Q7Z5J4 1906 aaPredicted RBP4.94□□□□□ -1.62
RTF1-204ENST00000558117 DEFB108AA8MXU0 73 aa4.94□□□□□ -1.62
RTF1-204ENST00000558117 GOLGA8SH3BPF8 625 aa4.94□□□□□ -1.62
RTF1-204ENST00000558117 UBFD1O14562 309 aaKnown RBP4.94□□□□□ -1.62
RTF1-204ENST00000558117 PRAMEF11O60813 436 aa4.94□□□□□ -1.62
RTF1-204ENST00000558117 PRSS56P0CW18 603 aa4.94□□□□□ -1.62
RTF1-204ENST00000558117 UROSP10746 265 aa4.94□□□□□ -1.62
RTF1-204ENST00000558117 COX6A1P12074 109 aa4.94□□□□□ -1.62
RTF1-204ENST00000558117 KRT13P13646 458 aa4.94□□□□□ -1.62
RTF1-204ENST00000558117 FERP16591 822 aa4.94□□□□□ -1.62
RTF1-204ENST00000558117 SYT1P21579 422 aa4.94□□□□□ -1.62
RTF1-204ENST00000558117 ACAA2P42765 397 aaKnown RBP4.94□□□□□ -1.62
RTF1-204ENST00000558117 GPR1P46091 355 aa4.94□□□□□ -1.62
RTF1-204ENST00000558117 NME5P56597 212 aa4.94□□□□□ -1.62
RTF1-204ENST00000558117 ZNF33BQ06732 778 aa4.94□□□□□ -1.62
RTF1-204ENST00000558117 OR1C1Q15619 314 aa4.94□□□□□ -1.62
RTF1-204ENST00000558117 TFDP3Q5H9I0 405 aa4.94□□□□□ -1.62
RTF1-204ENST00000558117 RIPPLY2Q5TAB7 128 aa4.94□□□□□ -1.62
RTF1-204ENST00000558117 FAM173BQ6P4H8 233 aa4.94□□□□□ -1.62
RTF1-204ENST00000558117 NHLRC1Q6VVB1 395 aa4.94□□□□□ -1.62
RTF1-204ENST00000558117 RFLNAQ6ZTI6 216 aa4.94□□□□□ -1.62
RTF1-204ENST00000558117 COX15Q7KZN9 410 aa4.94□□□□□ -1.62
RTF1-204ENST00000558117 KCTD9Q7L273 389 aa4.94□□□□□ -1.62
RTF1-204ENST00000558117 NDUFAF7Q7L592 441 aa4.94□□□□□ -1.62
RTF1-204ENST00000558117 HSD11B1LQ7Z5J1 315 aa4.94□□□□□ -1.62
RTF1-204ENST00000558117 CENPVQ7Z7K6 275 aaPredicted RBP4.94□□□□□ -1.62
RTF1-204ENST00000558117 KLHL7Q8IXQ5 586 aa4.94□□□□□ -1.62
RTF1-204ENST00000558117 DNAJC22Q8N4W6 341 aa4.94□□□□□ -1.62
RTF1-204ENST00000558117 FAM184AQ8NB25 1140 aa4.94□□□□□ -1.62
RTF1-204ENST00000558117 TMEM178AQ8NBL3 297 aa4.94□□□□□ -1.62
RTF1-204ENST00000558117 OR7G3Q8NG95 312 aa4.94□□□□□ -1.62
RTF1-204ENST00000558117 OR5M8Q8NGP6 311 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms