RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 HTR3AP46098 478 aa15.35■□□□□ 0.05
SNX1-203ENST00000558040 FOXD4Q12950 439 aaPredicted RBP15.35■□□□□ 0.05
SNX1-203ENST00000558040 OTUD3Q5T2D3 398 aaPredicted RBP15.35■□□□□ 0.05
SNX1-203ENST00000558040 TIGD3Q6B0B8 471 aa15.35■□□□□ 0.05
SNX1-203ENST00000558040 SLC25A25Q6KCM7 469 aa15.35■□□□□ 0.05
SNX1-203ENST00000558040 PODNL1Q6PEZ8 512 aa15.35■□□□□ 0.05
SNX1-203ENST00000558040 ZNF730Q6ZMV8 503 aa15.35■□□□□ 0.05
SNX1-203ENST00000558040 CBR4Q8N4T8 237 aa15.35■□□□□ 0.05
SNX1-203ENST00000558040 WDSUB1Q8N9V3 476 aa15.35■□□□□ 0.05
SNX1-203ENST00000558040 OR10G2Q8NGC3 310 aa15.35■□□□□ 0.05
SNX1-203ENST00000558040 SLC7A13Q8TCU3 470 aa15.35■□□□□ 0.05
SNX1-203ENST00000558040 ACOT11Q8WXI4 607 aaPredicted RBP15.35■□□□□ 0.05
SNX1-203ENST00000558040 ZCCHC14Q8WYQ9 949 aaKnown RBP15.35■□□□□ 0.05
SNX1-203ENST00000558040 C3orf49Q96BT1 292 aa15.35■□□□□ 0.05
SNX1-203ENST00000558040 JSRP1Q96MG2 331 aaPredicted RBP15.35■□□□□ 0.05
SNX1-203ENST00000558040 RBM4BQ9BQ04 359 aaKnown RBP15.35■□□□□ 0.05
SNX1-203ENST00000558040 PSD2Q9BQI7 771 aa15.35■□□□□ 0.05
SNX1-203ENST00000558040 RBM4Q9BWF3 364 aaKnown RBP15.35■□□□□ 0.05
SNX1-203ENST00000558040 COQ10BQ9H8M1 238 aa15.35■□□□□ 0.05
SNX1-203ENST00000558040 KIF17Q9P2E2 1029 aa15.35■□□□□ 0.05
SNX1-203ENST00000558040 PCDHGB6Q9Y5F9 930 aa15.35■□□□□ 0.05
SNX1-203ENST00000558040 MED13Q9UHV7 2174 aa15.35■□□□□ 0.05
SNX1-203ENST00000558040 DCHS1Q96JQ0 3298 aa15.34■□□□□ 0.05
SNX1-203ENST00000558040 A0A087WZY1 265 aa15.34■□□□□ 0.05
SNX1-203ENST00000558040 MED19A0JLT2 244 aaPredicted RBP15.34■□□□□ 0.05
SNX1-203ENST00000558040 SH3PXD2BA1X283 911 aa15.34■□□□□ 0.05
SNX1-203ENST00000558040 ELOA3DA6NLF2 546 aaPredicted RBP15.34■□□□□ 0.05
SNX1-203ENST00000558040 PDLIM1O00151 329 aa15.34■□□□□ 0.05
SNX1-203ENST00000558040 EI24O14681 340 aa15.34■□□□□ 0.05
SNX1-203ENST00000558040 NME2P1O60361 137 aa15.34■□□□□ 0.05
SNX1-203ENST00000558040 HPRP00739 348 aa15.34■□□□□ 0.05
SNX1-203ENST00000558040 THY1P04216 161 aa15.34■□□□□ 0.05
SNX1-203ENST00000558040 SP1P08047 785 aa15.34■□□□□ 0.05
SNX1-203ENST00000558040 ANXA8P13928 327 aa15.34■□□□□ 0.05
SNX1-203ENST00000558040 NME2P22392 152 aa15.34■□□□□ 0.05
SNX1-203ENST00000558040 DNASE1L1P49184 302 aa15.34■□□□□ 0.05
SNX1-203ENST00000558040 ALDH3A2P51648 485 aa15.34■□□□□ 0.05
SNX1-203ENST00000558040 DAG1Q14118 895 aa15.34■□□□□ 0.05
SNX1-203ENST00000558040 ELOA3BQ3SY89 546 aa15.34■□□□□ 0.05
SNX1-203ENST00000558040 PPP4R4Q6NUP7 873 aa15.34■□□□□ 0.05
SNX1-203ENST00000558040 GRINAQ7Z429 371 aa15.34■□□□□ 0.05
SNX1-203ENST00000558040 RNF113BQ8IZP6 322 aaKnown RBP15.34■□□□□ 0.05
SNX1-203ENST00000558040 HS3ST5Q8IZT8 346 aa15.34■□□□□ 0.05
SNX1-203ENST00000558040 TMEM178AQ8NBL3 297 aa15.34■□□□□ 0.05
SNX1-203ENST00000558040 ELOA3Q8NG57 546 aa15.34■□□□□ 0.05
SNX1-203ENST00000558040 C1GALT1C1Q96EU7 318 aa15.34■□□□□ 0.05
SNX1-203ENST00000558040 FUZQ9BT04 418 aa15.34■□□□□ 0.05
SNX1-203ENST00000558040 ADAM19Q9H013 955 aa15.34■□□□□ 0.05
SNX1-203ENST00000558040 ZNF556Q9HAH1 456 aa15.34■□□□□ 0.05
SNX1-203ENST00000558040 A0A087WUU8 490 aa15.33■□□□□ 0.04
SNX1-203ENST00000558040 MKRN2OSH3BPM6 223 aa15.33■□□□□ 0.04
SNX1-203ENST00000558040 KLRC4-KLRK1H3BQV0 150 aa15.33■□□□□ 0.04
SNX1-203ENST00000558040 SOCS2O14508 198 aa15.33■□□□□ 0.04
SNX1-203ENST00000558040 OR10H3O60404 316 aa15.33■□□□□ 0.04
SNX1-203ENST00000558040 CBR3O75828 277 aa15.33■□□□□ 0.04
SNX1-203ENST00000558040 LYPD3O95274 346 aa15.33■□□□□ 0.04
SNX1-203ENST00000558040 PRKCAP17252 672 aa15.33■□□□□ 0.04
SNX1-203ENST00000558040 TACR3P29371 465 aa15.33■□□□□ 0.04
SNX1-203ENST00000558040 POLR2HP52434 150 aaKnown RBP15.33■□□□□ 0.04
SNX1-203ENST00000558040 DSCR4P56555 118 aaPredicted RBP15.33■□□□□ 0.04
SNX1-203ENST00000558040 LAPTM4AQ15012 233 aa15.33■□□□□ 0.04
SNX1-203ENST00000558040 TOMM34Q15785 309 aaPredicted RBP15.33■□□□□ 0.04
SNX1-203ENST00000558040 TTC33Q6PID6 262 aaPredicted RBP15.33■□□□□ 0.04
SNX1-203ENST00000558040 ATG4DQ86TL0 474 aaPredicted RBP15.33■□□□□ 0.04
SNX1-203ENST00000558040 NKAIN4Q8IVV8 208 aa15.33■□□□□ 0.04
SNX1-203ENST00000558040 GALNT4Q8N4A0 578 aa15.33■□□□□ 0.04
SNX1-203ENST00000558040 ZADH2Q8N4Q0 377 aa15.33■□□□□ 0.04
SNX1-203ENST00000558040 ATG16L2Q8NAA4 619 aa15.33■□□□□ 0.04
SNX1-203ENST00000558040 OR2M7Q8NG81 312 aa15.33■□□□□ 0.04
SNX1-203ENST00000558040 OR4K5Q8NGD3 323 aa15.33■□□□□ 0.04
SNX1-203ENST00000558040 PIGXQ8TBF5 258 aa15.33■□□□□ 0.04
SNX1-203ENST00000558040 TMEM239Q8WW34 195 aa15.33■□□□□ 0.04
SNX1-203ENST00000558040 DNAJC9Q8WXX5 260 aa15.33■□□□□ 0.04
SNX1-203ENST00000558040 PRSS27Q9BQR3 290 aa15.33■□□□□ 0.04
SNX1-203ENST00000558040 MED17Q9NVC6 651 aa15.33■□□□□ 0.04
SNX1-203ENST00000558040 USE1Q9NZ43 259 aa15.33■□□□□ 0.04
SNX1-203ENST00000558040 B4GALT7Q9UBV7 327 aa15.33■□□□□ 0.04
SNX1-203ENST00000558040 FBXL2Q9UKC9 423 aa15.33■□□□□ 0.04
SNX1-203ENST00000558040 MGAT4BQ9UQ53 548 aa15.33■□□□□ 0.04
SNX1-203ENST00000558040 MED31Q9Y3C7 131 aa15.33■□□□□ 0.04
SNX1-203ENST00000558040 PCDHGB7Q9Y5F8 929 aa15.33■□□□□ 0.04
SNX1-203ENST00000558040 ORC6Q9Y5N6 252 aa15.33■□□□□ 0.04
SNX1-203ENST00000558040 MAGED1Q9Y5V3 778 aaPredicted RBP15.33■□□□□ 0.04
SNX1-203ENST00000558040 SPTBN4Q9H254 2564 aa15.32■□□□□ 0.04
SNX1-203ENST00000558040 A0A087WUJ7 227 aa15.32■□□□□ 0.04
SNX1-203ENST00000558040 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.32■□□□□ 0.04
SNX1-203ENST00000558040 A0A0G2JMM0 328 aa15.32■□□□□ 0.04
SNX1-203ENST00000558040 A0A1W2PPB8 328 aa15.32■□□□□ 0.04
SNX1-203ENST00000558040 A0A1W2PRS3 328 aa15.32■□□□□ 0.04
SNX1-203ENST00000558040 KIR3DP1A8MWS1 328 aa15.32■□□□□ 0.04
SNX1-203ENST00000558040 H0YJX3 145 aa15.32■□□□□ 0.04
SNX1-203ENST00000558040 ZNF26P17031 533 aaPredicted RBP15.32■□□□□ 0.04
SNX1-203ENST00000558040 FUT4P22083 530 aa15.32■□□□□ 0.04
SNX1-203ENST00000558040 PRKACGP22612 351 aa15.32■□□□□ 0.04
SNX1-203ENST00000558040 CXCR1P25024 350 aa15.32■□□□□ 0.04
SNX1-203ENST00000558040 MST1P26927 711 aa15.32■□□□□ 0.04
SNX1-203ENST00000558040 EIF1P41567 113 aaKnown RBP15.32■□□□□ 0.04
SNX1-203ENST00000558040 TNFSF10P50591 281 aa15.32■□□□□ 0.04
SNX1-203ENST00000558040 UGT2B15P54855 530 aa15.32■□□□□ 0.04
SNX1-203ENST00000558040 DLX5P56178 289 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms