RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 RBM45Q8IUH3 476 aaKnown RBP19.24■□□□□ 0.67
CASC4-204ENST00000557945 OR52E4Q8NGH9 312 aa19.24■□□□□ 0.67
CASC4-204ENST00000557945 OR4D11Q8NGI4 311 aa19.24■□□□□ 0.67
CASC4-204ENST00000557945 POC1BQ8TC44 478 aa19.24■□□□□ 0.67
CASC4-204ENST00000557945 ABTB1Q969K4 478 aaPredicted RBP19.24■□□□□ 0.67
CASC4-204ENST00000557945 MRGPRX4Q96LA9 322 aa19.24■□□□□ 0.67
CASC4-204ENST00000557945 LRGUKQ96M69 825 aa19.24■□□□□ 0.67
CASC4-204ENST00000557945 MCHR1Q99705 422 aa19.24■□□□□ 0.67
CASC4-204ENST00000557945 SPRR3Q9UBC9 169 aa19.24■□□□□ 0.67
CASC4-204ENST00000557945 TESQ9UGI8 421 aaKnown RBP19.24■□□□□ 0.67
CASC4-204ENST00000557945 C7orf72A4D263 438 aa19.23■□□□□ 0.67
CASC4-204ENST00000557945 NPIPA2E9PIF3 369 aa19.23■□□□□ 0.67
CASC4-204ENST00000557945 NPIPA3F8WFD2 350 aa19.23■□□□□ 0.67
CASC4-204ENST00000557945 H3BML4 177 aa19.23■□□□□ 0.67
CASC4-204ENST00000557945 AQP7O14520 342 aa19.23■□□□□ 0.67
CASC4-204ENST00000557945 PRKD3O94806 890 aa19.23■□□□□ 0.67
CASC4-204ENST00000557945 WISP1O95388 367 aa19.23■□□□□ 0.67
CASC4-204ENST00000557945 ZNF17P17021 662 aa19.23■□□□□ 0.67
CASC4-204ENST00000557945 BMP7P18075 431 aa19.23■□□□□ 0.67
CASC4-204ENST00000557945 CHMP24386 653 aa19.23■□□□□ 0.67
CASC4-204ENST00000557945 GFRA1P56159 465 aa19.23■□□□□ 0.67
CASC4-204ENST00000557945 TRAP1Q12931 704 aaKnown RBP19.23■□□□□ 0.67
CASC4-204ENST00000557945 TMEM44Q2T9K0 475 aa19.23■□□□□ 0.67
CASC4-204ENST00000557945 WBP2NLQ6ICG8 309 aa19.23■□□□□ 0.67
CASC4-204ENST00000557945 LCN8Q6JVE9 175 aa19.23■□□□□ 0.67
CASC4-204ENST00000557945 PLEKHM3Q6ZWE6 761 aa19.23■□□□□ 0.67
CASC4-204ENST00000557945 GRINAQ7Z429 371 aa19.23■□□□□ 0.67
CASC4-204ENST00000557945 ST6GALNAC3Q8NDV1 305 aa19.23■□□□□ 0.67
CASC4-204ENST00000557945 ZNF559Q9BR84 538 aa19.23■□□□□ 0.67
CASC4-204ENST00000557945 TRIM2Q9C040 744 aa19.23■□□□□ 0.67
CASC4-204ENST00000557945 MMADHCQ9H3L0 296 aaPredicted RBP19.23■□□□□ 0.67
CASC4-204ENST00000557945 RPS6KB2Q9UBS0 482 aa19.23■□□□□ 0.67
CASC4-204ENST00000557945 SLC7A8Q9UHI5 535 aa19.23■□□□□ 0.67
CASC4-204ENST00000557945 ZNF337Q9Y3M9 751 aa19.23■□□□□ 0.67
CASC4-204ENST00000557945 KALRNO60229 2985 aa19.23■□□□□ 0.67
CASC4-204ENST00000557945 DNAJC13O75165 2243 aa19.22■□□□□ 0.67
CASC4-204ENST00000557945 ACTL6AO96019 429 aa19.22■□□□□ 0.67
CASC4-204ENST00000557945 POU3F2P20265 443 aaPredicted RBP19.22■□□□□ 0.67
CASC4-204ENST00000557945 HTR2AP28223 471 aa19.22■□□□□ 0.67
CASC4-204ENST00000557945 PTGS2P35354 604 aa19.22■□□□□ 0.67
CASC4-204ENST00000557945 SLC1A3P43003 542 aa19.22■□□□□ 0.67
CASC4-204ENST00000557945 STARP49675 285 aa19.22■□□□□ 0.67
CASC4-204ENST00000557945 RBPJQ06330 500 aa19.22■□□□□ 0.67
CASC4-204ENST00000557945 NPTX1Q15818 432 aa19.22■□□□□ 0.67
CASC4-204ENST00000557945 IGFBP7Q16270 282 aa19.22■□□□□ 0.67
CASC4-204ENST00000557945 ZSCAN26Q16670 478 aa19.22■□□□□ 0.67
CASC4-204ENST00000557945 SLC25A53Q5H9E4 307 aa19.22■□□□□ 0.67
CASC4-204ENST00000557945 ENPP6Q6UWR7 440 aa19.22■□□□□ 0.67
CASC4-204ENST00000557945 DEF8Q6ZN54 512 aa19.22■□□□□ 0.67
CASC4-204ENST00000557945 FGD2Q7Z6J4 655 aa19.22■□□□□ 0.67
CASC4-204ENST00000557945 YTHDF3Q7Z739 585 aaKnown RBP19.22■□□□□ 0.67
CASC4-204ENST00000557945 FAM86B1Q8N7N1 296 aa19.22■□□□□ 0.67
CASC4-204ENST00000557945 ATP6V1C2Q8NEY4 427 aa19.22■□□□□ 0.67
CASC4-204ENST00000557945 GEMIN6Q8WXD5 167 aaKnown RBP19.22■□□□□ 0.67
CASC4-204ENST00000557945 SMPDL3BQ92485 455 aa19.22■□□□□ 0.67
CASC4-204ENST00000557945 MIB2Q96AX9 1013 aa19.22■□□□□ 0.67
CASC4-204ENST00000557945 SARAFQ96BY9 339 aa19.22■□□□□ 0.67
CASC4-204ENST00000557945 UGT2B28Q9BY64 529 aa19.22■□□□□ 0.67
CASC4-204ENST00000557945 TRIM15Q9C019 465 aa19.22■□□□□ 0.67
CASC4-204ENST00000557945 TMEM27Q9HBJ8 222 aa19.22■□□□□ 0.67
CASC4-204ENST00000557945 CTPS2Q9NRF8 586 aa19.22■□□□□ 0.67
CASC4-204ENST00000557945 ACAD8Q9UKU7 415 aa19.22■□□□□ 0.67
CASC4-204ENST00000557945 SMG1Q96Q15 3661 aaKnown RBP19.22■□□□□ 0.67
CASC4-204ENST00000557945 SPENQ96T58 3664 aaKnown RBP19.22■□□□□ 0.67
CASC4-204ENST00000557945 PRRC2CQ9Y520 2896 aaKnown RBP19.22■□□□□ 0.67
CASC4-204ENST00000557945 MED12Q93074 2177 aa19.22■□□□□ 0.67
CASC4-204ENST00000557945 SHANK1Q9Y566 2161 aa19.22■□□□□ 0.67
CASC4-204ENST00000557945 LINC01387J3KSC0 135 aa19.21■□□□□ 0.67
CASC4-204ENST00000557945 ACOT8O14734 319 aa19.21■□□□□ 0.67
CASC4-204ENST00000557945 TPST2O60704 377 aa19.21■□□□□ 0.67
CASC4-204ENST00000557945 ABOP16442 354 aa19.21■□□□□ 0.67
CASC4-204ENST00000557945 IL11P20809 199 aa19.21■□□□□ 0.67
CASC4-204ENST00000557945 PSMA4P25789 261 aaKnown RBP19.21■□□□□ 0.67
CASC4-204ENST00000557945 ADH6P28332 368 aa19.21■□□□□ 0.67
CASC4-204ENST00000557945 TACR3P29371 465 aa19.21■□□□□ 0.67
CASC4-204ENST00000557945 OR1Q1Q15612 314 aa19.21■□□□□ 0.67
CASC4-204ENST00000557945 MTX3Q5HYI7 312 aa19.21■□□□□ 0.67
CASC4-204ENST00000557945 NHSL2Q5HYW2 709 aa19.21■□□□□ 0.67
CASC4-204ENST00000557945 VASNQ6EMK4 673 aa19.21■□□□□ 0.67
CASC4-204ENST00000557945 RNF217Q8TC41 542 aa19.21■□□□□ 0.67
CASC4-204ENST00000557945 TMEM185BQ9H7F4 350 aa19.21■□□□□ 0.67
CASC4-204ENST00000557945 SERINC1Q9NRX5 453 aa19.21■□□□□ 0.67
CASC4-204ENST00000557945 POMPQ9Y244 141 aa19.21■□□□□ 0.67
CASC4-204ENST00000557945 OR14I1A6ND48 311 aa19.2■□□□□ 0.66
CASC4-204ENST00000557945 CPSF4LA6NMK7 179 aaKnown RBP19.2■□□□□ 0.66
CASC4-204ENST00000557945 ETV2O00321 342 aaPredicted RBP19.2■□□□□ 0.66
CASC4-204ENST00000557945 NTN1O95631 604 aa19.2■□□□□ 0.66
CASC4-204ENST00000557945 OPN1LWP04000 364 aa19.2■□□□□ 0.66
CASC4-204ENST00000557945 IFNW1P05000 195 aa19.2■□□□□ 0.66
CASC4-204ENST00000557945 PEPDP12955 493 aa19.2■□□□□ 0.66
CASC4-204ENST00000557945 CCNA2P20248 432 aa19.2■□□□□ 0.66
CASC4-204ENST00000557945 HTR3AP46098 478 aa19.2■□□□□ 0.66
CASC4-204ENST00000557945 POLR2HP52434 150 aaKnown RBP19.2■□□□□ 0.66
CASC4-204ENST00000557945 KCNC4Q03721 635 aa19.2■□□□□ 0.66
CASC4-204ENST00000557945 CRYZQ08257 329 aaKnown RBP19.2■□□□□ 0.66
CASC4-204ENST00000557945 FLOT2Q14254 428 aa19.2■□□□□ 0.66
CASC4-204ENST00000557945 DCST1Q5T197 706 aa19.2■□□□□ 0.66
CASC4-204ENST00000557945 CHERPQ8IWX8 916 aaKnown RBP19.2■□□□□ 0.66
CASC4-204ENST00000557945 OR5M9Q8NGP3 310 aa19.2■□□□□ 0.66
CASC4-204ENST00000557945 RELTQ969Z4 430 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms