RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 SPEGQ15772 3267 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 RIF1Q5UIP0 2472 aaKnown RBP4.11□□□□□ -1.75
SRP54-212ENST00000556992 TRGV11A0A075B6L2 103 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 IGHV1OR21-1A0A087WYE8 117 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 A0A0A6YYC8 382 aaPredicted RBP4.11□□□□□ -1.75
SRP54-212ENST00000556992 IGHV5-51A0A0C4DH38 117 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 CDHR4A6H8M9 788 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 SYNDIG1LA6NDD5 238 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 CCDC160A6NGH7 325 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 ZNF860A6NHJ4 632 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 AGAP5A6NIR3 686 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 PTGES3LE9PB15 166 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 E9PQ18 207 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 I3L1I5 382 aaPredicted RBP4.11□□□□□ -1.75
SRP54-212ENST00000556992 FFAR1O14842 300 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 YKT6O15498 198 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 ZNF749O43361 778 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 B4GAT1O43505 415 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 DUX1O43812 170 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 KIF1CO43896 1103 aaKnown RBP4.11□□□□□ -1.75
SRP54-212ENST00000556992 FGF17O60258 216 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 OR10H3O60404 316 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 FCMRO60667 390 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 UGT2B17O75795 530 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 OR2B3O76000 313 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 ADAP00813 363 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 CHRM4P08173 479 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 OSMP13725 252 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 IL7RP16871 459 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 TNNI3P19429 210 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 TNFRSF1BP20333 461 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 BCKDHBP21953 392 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 CBLP22681 906 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 ITPKBP27987 946 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 ELK4P28324 431 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 CD1CP29017 333 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 GABRA3P34903 492 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 GGT2P36268 569 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 PIGAP37287 484 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 ID4P47928 161 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 GABRA4P48169 554 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 DHPSP49366 369 aaPredicted RBP4.11□□□□□ -1.75
SRP54-212ENST00000556992 CRISP1P54107 249 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 CDH15P55291 814 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 OR1D5P58170 312 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 CDC42P60953 191 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 PPP1CAP62136 330 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 OLR1P78380 273 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 IGLV3-21P80748 117 aaPredicted RBP4.11□□□□□ -1.75
SRP54-212ENST00000556992 SHC2P98077 582 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 MGAT2Q10469 447 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 ST3GAL3Q11203 375 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 ILKQ13418 452 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 RAPSNQ13702 412 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 NR1D2Q14995 579 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 MAD2L1BPQ15013 274 aaPredicted RBP4.11□□□□□ -1.75
SRP54-212ENST00000556992 TRAM2Q15035 370 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 LTB4RQ15722 352 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 NPTX1Q15818 432 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 CLPPQ16740 277 aaPredicted RBP4.11□□□□□ -1.75
SRP54-212ENST00000556992 PRICKLE4Q2TBC4 344 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 CNPY1Q3B7I2 92 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 EIPR1Q53HC9 387 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 FGD3Q5JSP0 725 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 FHL5Q5TD97 284 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 NKAIN2Q5VXU1 208 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 ZNF770Q6IQ21 691 aaPredicted RBP4.11□□□□□ -1.75
SRP54-212ENST00000556992 DEF8Q6ZN54 512 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 KCTD8Q6ZWB6 473 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 DGLUCYQ7Z3D6 616 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 SPARTQ8N0X7 666 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 AQP11Q8NBQ7 271 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 BPIFB6Q8NFQ5 453 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 OR7G1Q8NGA0 311 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 GPR32P1Q8NGA4 272 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 OR5T3Q8NGG3 340 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 OR5D16Q8NGK9 328 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 OR51Q1Q8NH59 317 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 CEP76Q8TAP6 659 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 ZNF420Q8TAQ5 688 aaPredicted RBP4.11□□□□□ -1.75
SRP54-212ENST00000556992 GPR151Q8TDV0 419 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 NINJ1Q92982 152 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 MYDGFQ969H8 173 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 SLC38A4Q969I6 547 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 ZNF566Q969W8 418 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 CTHRC1Q96CG8 243 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 MVB12AQ96EY5 273 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 MMABQ96EY8 250 aaPredicted RBP4.11□□□□□ -1.75
SRP54-212ENST00000556992 GIMAP5Q96F15 307 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 OTUB1Q96FW1 271 aaPredicted RBP4.11□□□□□ -1.75
SRP54-212ENST00000556992 SDF2Q99470 211 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 PITX2Q99697 317 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 ARHGDIGQ99819 225 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 TEX12Q9BXU0 123 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 DGCR6LQ9BY27 220 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 POLR2J2Q9GZM3 115 aaKnown RBP4.11□□□□□ -1.75
SRP54-212ENST00000556992 YIPF3Q9GZM5 350 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 HOXD1Q9GZZ0 328 aa4.11□□□□□ -1.75
SRP54-212ENST00000556992 SPRTNQ9H040 489 aaPredicted RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms