RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 DPY30Q9C005 99 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 TUBB1Q9H4B7 451 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 ELOVL6Q9H5J4 265 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 PRSS16Q9NQE7 514 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 BATF3Q9NR55 127 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 C1orf109Q9NX04 203 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 ADA2Q9NZK5 511 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 CD84Q9UIB8 345 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 ZNF225Q9UK10 706 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 ZNF490Q9ULM2 529 aaPredicted RBP4.72□□□□□ -1.65
SRP54-211ENST00000556445 PSMD13Q9UNM6 376 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 GPR132Q9UNW8 380 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 MGAT4BQ9UQ53 548 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 FOXA2Q9Y261 457 aaPredicted RBP4.72□□□□□ -1.65
SRP54-211ENST00000556445 BTRCQ9Y297 605 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 NCKAP1Q9Y2A7 1128 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 L3MBTL1Q9Y468 752 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 LRRC42Q9Y546 428 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 FADS3Q9Y5Q0 445 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 STON1Q9Y6Q2 735 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 MUC22E2RYF6 1773 aaPredicted RBP4.72□□□□□ -1.65
SRP54-211ENST00000556445 DOCK8Q8NF50 2099 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 PRRC2BQ5JSZ5 2229 aaKnown RBP4.72□□□□□ -1.65
SRP54-211ENST00000556445 TCF20Q9UGU0 1960 aaKnown RBP4.71□□□□□ -1.66
SRP54-211ENST00000556445 A0A1B0GTQ1 180 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 C1orf226A1L170 272 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 OR2AG2A6NM03 316 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 LOC730098B7Z3J9 87 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 HSBP1L1C9JCN9 74 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 WRBO00258 174 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 FBP2O00757 339 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 CLDN4O14493 209 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 LSM1O15116 133 aaKnown RBP4.71□□□□□ -1.66
SRP54-211ENST00000556445 KMOO15229 486 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 PI15O43692 258 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 JRKO75564 520 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 PDE5AO76074 875 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 UMPSP11172 480 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 HLA-EP13747 358 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 HSD17B1P14061 328 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 DDX5P17844 614 aaKnown RBP4.71□□□□□ -1.66
SRP54-211ENST00000556445 ATP6V1C1P21283 382 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 CXCR2P25025 360 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 PRDX3P30048 256 aaKnown RBP4.71□□□□□ -1.66
SRP54-211ENST00000556445 SERPINB1P30740 379 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 PTGER1P34995 402 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 CA5AP35218 305 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 NUP62P37198 522 aaPredicted RBP4.71□□□□□ -1.66
SRP54-211ENST00000556445 RPL3P39023 403 aaKnown RBP4.71□□□□□ -1.66
SRP54-211ENST00000556445 MAGEB1P43366 347 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 CDKN1BP46527 198 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 HSPA13P48723 471 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 THOP1P52888 689 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 SLC37A1P57057 533 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 MRPS34P82930 218 aaKnown RBP4.71□□□□□ -1.66
SRP54-211ENST00000556445 SEMG2Q02383 582 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 CFHR3Q02985 330 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 FOLH1Q04609 750 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 SPOCK1Q08629 439 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 CNTN1Q12860 1018 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 GRB7Q14451 532 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 PAGE2BQ5JRK9 111 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 LRRC73Q5JTD7 316 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 C6orf141Q5SZD1 244 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 IL23RQ5VWK5 629 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 FRG2Q64ET8 278 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 NCR3LG1Q68D85 454 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 CAPN13Q6MZZ7 669 aaPredicted RBP4.71□□□□□ -1.66
SRP54-211ENST00000556445 C8orf82Q6P1X6 216 aaPredicted RBP4.71□□□□□ -1.66
SRP54-211ENST00000556445 PNCKQ6P2M8 343 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 TMEM65Q6PI78 240 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 AGTRAPQ6RW13 159 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 QSOX2Q6ZRP7 698 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 Q6ZSR9 355 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 RFLNAQ6ZTI6 216 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 DGLUCYQ7Z3D6 616 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 NANOGNBQ7Z5D8 188 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 DHDDSQ86SQ9 333 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 GPR180Q86V85 440 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 COMTD1Q86VU5 262 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 RALGPS2Q86X27 583 aaPredicted RBP4.71□□□□□ -1.66
SRP54-211ENST00000556445 DHFR2Q86XF0 187 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 NRROSQ86YC3 692 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 HPS6Q86YV9 775 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 TRAPPC5Q8IUR0 188 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 FUNDC1Q8IVP5 155 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 TDHQ8IZJ6 230 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 SLC43A2Q8N370 569 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 TRIML2Q8N7C3 387 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 SRFBP1Q8NEF9 429 aaKnown RBP4.71□□□□□ -1.66
SRP54-211ENST00000556445 OR2L2Q8NH16 312 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 OR14L1PQ8NHC6 308 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 SLC22A8Q8TCC7 542 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 DNAJC9Q8WXX5 260 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 RAD51AP1Q96B01 352 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 CCDC124Q96CT7 223 aaKnown RBP4.71□□□□□ -1.66
SRP54-211ENST00000556445 LRRC58Q96CX6 371 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 DUS3LQ96G46 650 aaKnown RBP4.71□□□□□ -1.66
SRP54-211ENST00000556445 MARK4Q96L34 752 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 ZNF583Q96ND8 569 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms