RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 NR1H2P55055 460 aa7.97□□□□□ -1.13
GTF2A1-204ENST00000556268 CDH13P55290 713 aa7.97□□□□□ -1.13
GTF2A1-204ENST00000556268 SIRPAP78324 504 aa7.97□□□□□ -1.13
GTF2A1-204ENST00000556268 PON3Q15166 354 aa7.97□□□□□ -1.13
GTF2A1-204ENST00000556268 APOOLQ6UXV4 268 aa7.97□□□□□ -1.13
GTF2A1-204ENST00000556268 ZNF704Q6ZNC4 412 aaPredicted RBP7.97□□□□□ -1.13
GTF2A1-204ENST00000556268 Q6ZPA2 131 aa7.97□□□□□ -1.13
GTF2A1-204ENST00000556268 DNM1P46Q6ZS02 220 aa7.97□□□□□ -1.13
GTF2A1-204ENST00000556268 RPS27LQ71UM5 84 aaKnown RBP7.97□□□□□ -1.13
GTF2A1-204ENST00000556268 EXOC3L1Q86VI1 746 aa7.97□□□□□ -1.13
GTF2A1-204ENST00000556268 UBQLNLQ8IYU4 475 aa7.97□□□□□ -1.13
GTF2A1-204ENST00000556268 OR5M1Q8NGP8 315 aa7.97□□□□□ -1.13
GTF2A1-204ENST00000556268 OR6K3Q8NGY3 331 aa7.97□□□□□ -1.13
GTF2A1-204ENST00000556268 LILRB1Q8NHL6 650 aaPredicted RBP7.97□□□□□ -1.13
GTF2A1-204ENST00000556268 C16orf78Q8WTQ4 265 aa7.97□□□□□ -1.13
GTF2A1-204ENST00000556268 TMEM171Q8WVE6 324 aa7.97□□□□□ -1.13
GTF2A1-204ENST00000556268 HOXB13Q92826 284 aaPredicted RBP7.97□□□□□ -1.13
GTF2A1-204ENST00000556268 EFHD2Q96C19 240 aaPredicted RBP7.97□□□□□ -1.13
GTF2A1-204ENST00000556268 C1GALT1C1Q96EU7 318 aa7.97□□□□□ -1.13
GTF2A1-204ENST00000556268 ZC3HAV1LQ96H79 300 aaKnown RBP7.97□□□□□ -1.13
GTF2A1-204ENST00000556268 GMPPAQ96IJ6 420 aaPredicted RBP7.97□□□□□ -1.13
GTF2A1-204ENST00000556268 ADGRG7Q96K78 797 aa7.97□□□□□ -1.13
GTF2A1-204ENST00000556268 MRPL57Q9BQC6 102 aaKnown RBP7.97□□□□□ -1.13
GTF2A1-204ENST00000556268 MLST8Q9BVC4 326 aa7.97□□□□□ -1.13
GTF2A1-204ENST00000556268 KLHL4Q9C0H6 718 aa7.97□□□□□ -1.13
GTF2A1-204ENST00000556268 PTGES2Q9H7Z7 377 aa7.97□□□□□ -1.13
GTF2A1-204ENST00000556268 BCO1Q9HAY6 547 aa7.97□□□□□ -1.13
GTF2A1-204ENST00000556268 FAM120CQ9NX05 1096 aaKnown RBP7.97□□□□□ -1.13
GTF2A1-204ENST00000556268 TAS2R9Q9NYW1 312 aa7.97□□□□□ -1.13
GTF2A1-204ENST00000556268 FLRT3Q9NZU0 649 aa7.97□□□□□ -1.13
GTF2A1-204ENST00000556268 PROCRQ9UNN8 238 aa7.97□□□□□ -1.13
GTF2A1-204ENST00000556268 C19orf53Q9UNZ5 99 aaPredicted RBP7.97□□□□□ -1.13
GTF2A1-204ENST00000556268 GPR52Q9Y2T5 361 aa7.97□□□□□ -1.13
GTF2A1-204ENST00000556268 UTP11Q9Y3A2 253 aaKnown RBP7.97□□□□□ -1.13
GTF2A1-204ENST00000556268 CHST2Q9Y4C5 530 aa7.97□□□□□ -1.13
GTF2A1-204ENST00000556268 ALPK2Q86TB3 2170 aa7.96□□□□□ -1.14
GTF2A1-204ENST00000556268 SS18L1O75177 396 aaPredicted RBP7.96□□□□□ -1.14
GTF2A1-204ENST00000556268 SMIM24O75264 130 aa7.96□□□□□ -1.14
GTF2A1-204ENST00000556268 IL33O95760 270 aa7.96□□□□□ -1.14
GTF2A1-204ENST00000556268 IL3P08700 152 aa7.96□□□□□ -1.14
GTF2A1-204ENST00000556268 DANCRP0C864 163 aa7.96□□□□□ -1.14
GTF2A1-204ENST00000556268 TCEA1P23193 301 aaKnown RBP7.96□□□□□ -1.14
GTF2A1-204ENST00000556268 PSMA4P25789 261 aaKnown RBP7.96□□□□□ -1.14
GTF2A1-204ENST00000556268 MAP3K8P41279 467 aa7.96□□□□□ -1.14
GTF2A1-204ENST00000556268 MTNR1BP49286 362 aa7.96□□□□□ -1.14
GTF2A1-204ENST00000556268 ATP5J2P56134 94 aa7.96□□□□□ -1.14
GTF2A1-204ENST00000556268 RPS3AP61247 264 aaKnown RBP7.96□□□□□ -1.14
GTF2A1-204ENST00000556268 C17orf67Q0P5P2 114 aa7.96□□□□□ -1.14
GTF2A1-204ENST00000556268 HEPACAMQ14CZ8 416 aa7.96□□□□□ -1.14
GTF2A1-204ENST00000556268 ERCC6LQ2NKX8 1250 aa7.96□□□□□ -1.14
GTF2A1-204ENST00000556268 FAM219BQ5XKK7 198 aa7.96□□□□□ -1.14
GTF2A1-204ENST00000556268 MARCH3Q86UD3 253 aa7.96□□□□□ -1.14
GTF2A1-204ENST00000556268 CCDC25Q86WR0 208 aa7.96□□□□□ -1.14
GTF2A1-204ENST00000556268 HIPK1Q86Z02 1210 aa7.96□□□□□ -1.14
GTF2A1-204ENST00000556268 TFAP2CQ92754 450 aa7.96□□□□□ -1.14
GTF2A1-204ENST00000556268 MTBPQ96DY7 904 aa7.96□□□□□ -1.14
GTF2A1-204ENST00000556268 HDHD5Q9BXW7 423 aa7.96□□□□□ -1.14
GTF2A1-204ENST00000556268 REG4Q9BYZ8 158 aa7.96□□□□□ -1.14
GTF2A1-204ENST00000556268 SHCBP1LQ9BZQ2 653 aa7.96□□□□□ -1.14
GTF2A1-204ENST00000556268 GLRX2Q9NS18 164 aa7.96□□□□□ -1.14
GTF2A1-204ENST00000556268 ZDHHC18Q9NUE0 388 aa7.96□□□□□ -1.14
GTF2A1-204ENST00000556268 WBP11Q9Y2W2 641 aaKnown RBP7.96□□□□□ -1.14
GTF2A1-204ENST00000556268 NBEAL1Q6ZS30 2694 aa7.96□□□□□ -1.14
GTF2A1-204ENST00000556268 CHD3Q12873 2000 aaKnown RBP7.95□□□□□ -1.14
GTF2A1-204ENST00000556268 UPK1AO00322 258 aa7.95□□□□□ -1.14
GTF2A1-204ENST00000556268 TLX2O43763 284 aaPredicted RBP7.95□□□□□ -1.14
GTF2A1-204ENST00000556268 OR4F21O95013 312 aa7.95□□□□□ -1.14
GTF2A1-204ENST00000556268 KRT6AP02538 564 aa7.95□□□□□ -1.14
GTF2A1-204ENST00000556268 KRT6BP04259 564 aa7.95□□□□□ -1.14
GTF2A1-204ENST00000556268 IFI6P09912 130 aa7.95□□□□□ -1.14
GTF2A1-204ENST00000556268 FCGR2AP12318 317 aa7.95□□□□□ -1.14
GTF2A1-204ENST00000556268 KRT4P19013 534 aa7.95□□□□□ -1.14
GTF2A1-204ENST00000556268 TSPAN8P19075 237 aa7.95□□□□□ -1.14
GTF2A1-204ENST00000556268 DDCP20711 480 aa7.95□□□□□ -1.14
GTF2A1-204ENST00000556268 IDUAP35475 653 aa7.95□□□□□ -1.14
GTF2A1-204ENST00000556268 ARL1P40616 181 aaPredicted RBP7.95□□□□□ -1.14
GTF2A1-204ENST00000556268 GSTM5P46439 218 aa7.95□□□□□ -1.14
GTF2A1-204ENST00000556268 KRT6CP48668 564 aa7.95□□□□□ -1.14
GTF2A1-204ENST00000556268 NHLH2Q02577 135 aa7.95□□□□□ -1.14
GTF2A1-204ENST00000556268 CSTF3Q12996 717 aaKnown RBP7.95□□□□□ -1.14
GTF2A1-204ENST00000556268 MALLQ13021 153 aa7.95□□□□□ -1.14
GTF2A1-204ENST00000556268 ETFDHQ16134 617 aa7.95□□□□□ -1.14
GTF2A1-204ENST00000556268 DECR1Q16698 335 aa7.95□□□□□ -1.14
GTF2A1-204ENST00000556268 CLEC12BQ2HXU8 276 aa7.95□□□□□ -1.14
GTF2A1-204ENST00000556268 CTU2Q2VPK5 515 aaKnown RBP7.95□□□□□ -1.14
GTF2A1-204ENST00000556268 UNC50Q53HI1 259 aa7.95□□□□□ -1.14
GTF2A1-204ENST00000556268 TCHHL1Q5QJ38 904 aaPredicted RBP7.95□□□□□ -1.14
GTF2A1-204ENST00000556268 CPTPQ5TA50 214 aa7.95□□□□□ -1.14
GTF2A1-204ENST00000556268 RAET1LQ5VY80 246 aa7.95□□□□□ -1.14
GTF2A1-204ENST00000556268 MBNL2Q5VZF2 373 aaKnown RBP7.95□□□□□ -1.14
GTF2A1-204ENST00000556268 MFSD12Q6NUT3 480 aa7.95□□□□□ -1.14
GTF2A1-204ENST00000556268 ZNF572Q7Z3I7 529 aaPredicted RBP7.95□□□□□ -1.14
GTF2A1-204ENST00000556268 OR2L13Q8N349 312 aa7.95□□□□□ -1.14
GTF2A1-204ENST00000556268 AKAP1Q92667 903 aaKnown RBP eCLIP7.95□□□□□ -1.14
GTF2A1-204ENST00000556268 EXOSC8Q96B26 276 aaKnown RBP7.95□□□□□ -1.14
GTF2A1-204ENST00000556268 ELP4Q96EB1 424 aa7.95□□□□□ -1.14
GTF2A1-204ENST00000556268 APIPQ96GX9 242 aa7.95□□□□□ -1.14
GTF2A1-204ENST00000556268 HBEGFQ99075 208 aa7.95□□□□□ -1.14
GTF2A1-204ENST00000556268 LMF2Q9BU23 707 aaKnown RBP7.95□□□□□ -1.14
GTF2A1-204ENST00000556268 ACPTQ9BZG2 426 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms