RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 IGHV3-48P01763 117 aa2□□□□□ -2.09
SCFD1-218ENST00000556256 ALOX5P09917 674 aa2□□□□□ -2.09
SCFD1-218ENST00000556256 RPA2P15927 270 aa2□□□□□ -2.09
SCFD1-218ENST00000556256 GCKP35557 465 aa2□□□□□ -2.09
SCFD1-218ENST00000556256 CHI3L1P36222 383 aaPredicted RBP2□□□□□ -2.09
SCFD1-218ENST00000556256 P2RY1P47900 373 aa2□□□□□ -2.09
SCFD1-218ENST00000556256 NUCB2P80303 420 aa2□□□□□ -2.09
SCFD1-218ENST00000556256 MXD4Q14582 209 aaPredicted RBP2□□□□□ -2.09
SCFD1-218ENST00000556256 LIPNQ5VXI9 398 aa2□□□□□ -2.09
SCFD1-218ENST00000556256 TTC23Q5W5X9 447 aa2□□□□□ -2.09
SCFD1-218ENST00000556256 ZNF544Q6NX49 715 aa2□□□□□ -2.09
SCFD1-218ENST00000556256 TIFABQ6ZNK6 161 aa2□□□□□ -2.09
SCFD1-218ENST00000556256 C16orf62Q7Z3J2 963 aa2□□□□□ -2.09
SCFD1-218ENST00000556256 SVOPLQ8N434 492 aa2□□□□□ -2.09
SCFD1-218ENST00000556256 DHRSXQ8N5I4 330 aa2□□□□□ -2.09
SCFD1-218ENST00000556256 KIR3DL3Q8N743 410 aa2□□□□□ -2.09
SCFD1-218ENST00000556256 C14orf178Q8N769 122 aaPredicted RBP2□□□□□ -2.09
SCFD1-218ENST00000556256 ANKFN1Q8N957 763 aa2□□□□□ -2.09
SCFD1-218ENST00000556256 FAM133AQ8N9E0 248 aa2□□□□□ -2.09
SCFD1-218ENST00000556256 SYT14Q8NB59 555 aa2□□□□□ -2.09
SCFD1-218ENST00000556256 IPMKQ8NFU5 416 aa2□□□□□ -2.09
SCFD1-218ENST00000556256 PNPT1Q8TCS8 783 aaKnown RBP2□□□□□ -2.09
SCFD1-218ENST00000556256 SLC5A11Q8WWX8 675 aa2□□□□□ -2.09
SCFD1-218ENST00000556256 FAM104AQ969W3 186 aa2□□□□□ -2.09
SCFD1-218ENST00000556256 TRIM44Q96DX7 344 aaPredicted RBP2□□□□□ -2.09
SCFD1-218ENST00000556256 PELI1Q96FA3 418 aa2□□□□□ -2.09
SCFD1-218ENST00000556256 SENP8Q96LD8 212 aa2□□□□□ -2.09
SCFD1-218ENST00000556256 AMDHD1Q96NU7 426 aa2□□□□□ -2.09
SCFD1-218ENST00000556256 IL4I1Q96RQ9 567 aa2□□□□□ -2.09
SCFD1-218ENST00000556256 PLEKHF1Q96S99 279 aa2□□□□□ -2.09
SCFD1-218ENST00000556256 ERP44Q9BS26 406 aa2□□□□□ -2.09
SCFD1-218ENST00000556256 ZNF670Q9BS34 389 aa2□□□□□ -2.09
SCFD1-218ENST00000556256 SRXN1Q9BYN0 137 aa2□□□□□ -2.09
SCFD1-218ENST00000556256 RHBGQ9H310 441 aa2□□□□□ -2.09
SCFD1-218ENST00000556256 AIPL1Q9NZN9 384 aa2□□□□□ -2.09
SCFD1-218ENST00000556256 ERVW-1Q9UQF0 538 aa2□□□□□ -2.09
SCFD1-218ENST00000556256 SMIM28A0A1B0GU29 152 aa1.99□□□□□ -2.09
SCFD1-218ENST00000556256 K7N7A8 449 aa1.99□□□□□ -2.09
SCFD1-218ENST00000556256 SULT2B1O00204 365 aa1.99□□□□□ -2.09
SCFD1-218ENST00000556256 FCN1O00602 326 aa1.99□□□□□ -2.09
SCFD1-218ENST00000556256 HCRTR1O43613 425 aa1.99□□□□□ -2.09
SCFD1-218ENST00000556256 PRKYO43930 277 aa1.99□□□□□ -2.09
SCFD1-218ENST00000556256 TIMP1P01033 207 aa1.99□□□□□ -2.09
SCFD1-218ENST00000556256 CCDC166P0CW27 439 aa1.99□□□□□ -2.09
SCFD1-218ENST00000556256 PSMB1P20618 241 aaKnown RBP1.99□□□□□ -2.09
SCFD1-218ENST00000556256 ATP6V1C1P21283 382 aa1.99□□□□□ -2.09
SCFD1-218ENST00000556256 VDAC1P21796 283 aa1.99□□□□□ -2.09
SCFD1-218ENST00000556256 MMP11P24347 488 aa1.99□□□□□ -2.09
SCFD1-218ENST00000556256 PSMA5P28066 241 aa1.99□□□□□ -2.09
SCFD1-218ENST00000556256 AQP1P29972 269 aa1.99□□□□□ -2.09
SCFD1-218ENST00000556256 PRKXP51817 358 aa1.99□□□□□ -2.09
SCFD1-218ENST00000556256 DIO3P55073 304 aa1.99□□□□□ -2.09
SCFD1-218ENST00000556256 RPS14P62263 151 aaKnown RBP1.99□□□□□ -2.09
SCFD1-218ENST00000556256 CBX1P83916 185 aa1.99□□□□□ -2.09
SCFD1-218ENST00000556256 CKAP4Q07065 602 aaKnown RBP1.99□□□□□ -2.09
SCFD1-218ENST00000556256 ELAVL3Q14576 367 aaKnown RBP1.99□□□□□ -2.09
SCFD1-218ENST00000556256 SLC25A52Q3SY17 297 aa1.99□□□□□ -2.09
SCFD1-218ENST00000556256 SPATA46Q5T0L3 261 aa1.99□□□□□ -2.09
SCFD1-218ENST00000556256 BLOC1S2Q6QNY1 142 aa1.99□□□□□ -2.09
SCFD1-218ENST00000556256 MOB3BQ86TA1 216 aa1.99□□□□□ -2.09
SCFD1-218ENST00000556256 ZNF683Q8IZ20 524 aa1.99□□□□□ -2.09
SCFD1-218ENST00000556256 STEAP2Q8NFT2 490 aa1.99□□□□□ -2.09
SCFD1-218ENST00000556256 OR51G2Q8NGK0 314 aa1.99□□□□□ -2.09
SCFD1-218ENST00000556256 OR4D5Q8NGN0 318 aa1.99□□□□□ -2.09
SCFD1-218ENST00000556256 OR1F12Q8NHA8 337 aa1.99□□□□□ -2.09
SCFD1-218ENST00000556256 LINC01006Q8NI28 216 aa1.99□□□□□ -2.09
SCFD1-218ENST00000556256 PAQR8Q8TEZ7 354 aa1.99□□□□□ -2.09
SCFD1-218ENST00000556256 RLN3Q8WXF3 142 aa1.99□□□□□ -2.09
SCFD1-218ENST00000556256 FRAT1Q92837 279 aaPredicted RBP1.99□□□□□ -2.09
SCFD1-218ENST00000556256 EMG1Q92979 244 aaKnown RBP1.99□□□□□ -2.09
SCFD1-218ENST00000556256 SH3YL1Q96HL8 342 aaPredicted RBP1.99□□□□□ -2.09
SCFD1-218ENST00000556256 C7orf34Q96L11 122 aa1.99□□□□□ -2.09
SCFD1-218ENST00000556256 TECTBQ96PL2 329 aa1.99□□□□□ -2.09
SCFD1-218ENST00000556256 TXN2Q99757 166 aa1.99□□□□□ -2.09
SCFD1-218ENST00000556256 SLC35A5Q9BS91 424 aa1.99□□□□□ -2.09
SCFD1-218ENST00000556256 NIPSNAP3BQ9BS92 247 aa1.99□□□□□ -2.09
SCFD1-218ENST00000556256 CRNKL1Q9BZJ0 848 aaKnown RBP1.99□□□□□ -2.09
SCFD1-218ENST00000556256 NMUR2Q9GZQ4 415 aa1.99□□□□□ -2.09
SCFD1-218ENST00000556256 NAT10Q9H0A0 1025 aaKnown RBP1.99□□□□□ -2.09
SCFD1-218ENST00000556256 ZNF385DQ9H6B1 395 aa1.99□□□□□ -2.09
SCFD1-218ENST00000556256 SMYD3Q9H7B4 428 aa1.99□□□□□ -2.09
SCFD1-218ENST00000556256 FANCFQ9NPI8 374 aa1.99□□□□□ -2.09
SCFD1-218ENST00000556256 PIPOXQ9P0Z9 390 aa1.99□□□□□ -2.09
SCFD1-218ENST00000556256 WARS2Q9UGM6 360 aaKnown RBP1.99□□□□□ -2.09
SCFD1-218ENST00000556256 TBK1Q9UHD2 729 aa1.99□□□□□ -2.09
SCFD1-218ENST00000556256 MRPS33Q9Y291 106 aaKnown RBP1.99□□□□□ -2.09
SCFD1-218ENST00000556256 MRPS7Q9Y2R9 242 aaKnown RBP1.99□□□□□ -2.09
SCFD1-218ENST00000556256 AK6Q9Y3D8 172 aaKnown RBP1.99□□□□□ -2.09
SCFD1-218ENST00000556256 ALG6Q9Y672 507 aa1.99□□□□□ -2.09
SCFD1-218ENST00000556256 TUBAL3A6NHL2 446 aa1.98□□□□□ -2.09
SCFD1-218ENST00000556256 K7EQM0 130 aa1.98□□□□□ -2.09
SCFD1-218ENST00000556256 RS1O15537 224 aa1.98□□□□□ -2.09
SCFD1-218ENST00000556256 ECI2O75521 394 aa1.98□□□□□ -2.09
SCFD1-218ENST00000556256 UGT2B17O75795 530 aa1.98□□□□□ -2.09
SCFD1-218ENST00000556256 KIAA0754O94854 1291 aa1.98□□□□□ -2.09
SCFD1-218ENST00000556256 GNA14O95837 355 aa1.98□□□□□ -2.09
SCFD1-218ENST00000556256 LALBAP00709 142 aa1.98□□□□□ -2.09
SCFD1-218ENST00000556256 OR8U8P0C7N1 319 aa1.98□□□□□ -2.09
SCFD1-218ENST00000556256 HNF1AP20823 631 aa1.98□□□□□ -2.09
SCFD1-218ENST00000556256 LAP3P28838 519 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms