RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 PAMR1Q6UXH9 720 aa16.45■□□□□ 0.22
NEDD1-208ENST00000555806 ANKFN1Q8N957 763 aa16.45■□□□□ 0.22
NEDD1-208ENST00000555806 ZNF563Q8TA94 476 aa16.45■□□□□ 0.22
NEDD1-208ENST00000555806 LRRC8CQ8TDW0 803 aa16.45■□□□□ 0.22
NEDD1-208ENST00000555806 RNF128Q8TEB7 428 aa16.45■□□□□ 0.22
NEDD1-208ENST00000555806 ABHD3Q8WU67 409 aa16.45■□□□□ 0.22
NEDD1-208ENST00000555806 ZC3HAV1LQ96H79 300 aaKnown RBP16.45■□□□□ 0.22
NEDD1-208ENST00000555806 ATP6V1G3Q96LB4 118 aa16.45■□□□□ 0.22
NEDD1-208ENST00000555806 SAP130Q9H0E3 1048 aa16.45■□□□□ 0.22
NEDD1-208ENST00000555806 QRSL1Q9H0R6 528 aaKnown RBP16.45■□□□□ 0.22
NEDD1-208ENST00000555806 COQ10BQ9H8M1 238 aa16.45■□□□□ 0.22
NEDD1-208ENST00000555806 PLSCR4Q9NRQ2 329 aa16.45■□□□□ 0.22
NEDD1-208ENST00000555806 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.45■□□□□ 0.22
NEDD1-208ENST00000555806 C6orf203Q9P0P8 240 aaPredicted RBP16.45■□□□□ 0.22
NEDD1-208ENST00000555806 LIPT1Q9Y234 373 aa16.45■□□□□ 0.22
NEDD1-208ENST00000555806 AKAP6Q13023 2319 aa16.44■□□□□ 0.22
NEDD1-208ENST00000555806 RYKP34925 604 aa16.44■□□□□ 0.22
NEDD1-208ENST00000555806 SESN3P58005 492 aa16.44■□□□□ 0.22
NEDD1-208ENST00000555806 MERTKQ12866 999 aa16.44■□□□□ 0.22
NEDD1-208ENST00000555806 RNPS1Q15287 305 aaKnown RBP16.44■□□□□ 0.22
NEDD1-208ENST00000555806 COX20Q5RI15 118 aa16.44■□□□□ 0.22
NEDD1-208ENST00000555806 TMEM201Q5SNT2 666 aa16.44■□□□□ 0.22
NEDD1-208ENST00000555806 ANKRD34AQ69YU3 496 aa16.44■□□□□ 0.22
NEDD1-208ENST00000555806 FCRLAQ7L513 359 aa16.44■□□□□ 0.22
NEDD1-208ENST00000555806 STK32CQ86UX6 486 aa16.44■□□□□ 0.22
NEDD1-208ENST00000555806 FAM71CQ8NEG0 241 aa16.44■□□□□ 0.22
NEDD1-208ENST00000555806 DYDC1Q8WWB3 177 aa16.44■□□□□ 0.22
NEDD1-208ENST00000555806 ZG16BQ96DA0 208 aa16.44■□□□□ 0.22
NEDD1-208ENST00000555806 TRNT1Q96Q11 434 aaKnown RBP16.44■□□□□ 0.22
NEDD1-208ENST00000555806 OR5B2Q96R09 309 aa16.44■□□□□ 0.22
NEDD1-208ENST00000555806 RMND5AQ9H871 391 aa16.44■□□□□ 0.22
NEDD1-208ENST00000555806 FANCFQ9NPI8 374 aa16.44■□□□□ 0.22
NEDD1-208ENST00000555806 SDR39U1Q9NRG7 319 aaPredicted RBP16.44■□□□□ 0.22
NEDD1-208ENST00000555806 SERINC1Q9NRX5 453 aa16.44■□□□□ 0.22
NEDD1-208ENST00000555806 ACER3Q9NUN7 267 aa16.44■□□□□ 0.22
NEDD1-208ENST00000555806 HEATR5AQ86XA9 2040 aa16.43■□□□□ 0.22
NEDD1-208ENST00000555806 F8P00451 2351 aa16.43■□□□□ 0.22
NEDD1-208ENST00000555806 CLDN24A6NM45 220 aa16.43■□□□□ 0.22
NEDD1-208ENST00000555806 ETV2O00321 342 aaPredicted RBP16.43■□□□□ 0.22
NEDD1-208ENST00000555806 DNAJA2O60884 412 aa16.43■□□□□ 0.22
NEDD1-208ENST00000555806 BCAS1O75363 584 aaPredicted RBP16.43■□□□□ 0.22
NEDD1-208ENST00000555806 RAF1P04049 648 aa16.43■□□□□ 0.22
NEDD1-208ENST00000555806 CHRM4P08173 479 aa16.43■□□□□ 0.22
NEDD1-208ENST00000555806 NR2F1P10589 423 aa16.43■□□□□ 0.22
NEDD1-208ENST00000555806 POLR2JP52435 117 aaKnown RBP16.43■□□□□ 0.22
NEDD1-208ENST00000555806 KCNJ10P78508 379 aa16.43■□□□□ 0.22
NEDD1-208ENST00000555806 KEAP1Q14145 624 aa16.43■□□□□ 0.22
NEDD1-208ENST00000555806 TTMPQ5BVD1 217 aa16.43■□□□□ 0.22
NEDD1-208ENST00000555806 LRRC74BQ6ZQY2 392 aa16.43■□□□□ 0.22
NEDD1-208ENST00000555806 PLEKHM3Q6ZWE6 761 aa16.43■□□□□ 0.22
NEDD1-208ENST00000555806 MIER2Q8N344 545 aa16.43■□□□□ 0.22
NEDD1-208ENST00000555806 ARFGAP2Q8N6H7 521 aa16.43■□□□□ 0.22
NEDD1-208ENST00000555806 GOLGA6L1Q8N7Z2 621 aa16.43■□□□□ 0.22
NEDD1-208ENST00000555806 OR9I1Q8NGQ6 314 aa16.43■□□□□ 0.22
NEDD1-208ENST00000555806 C7orf26Q96N11 449 aa16.43■□□□□ 0.22
NEDD1-208ENST00000555806 FOXC2Q99958 501 aa16.43■□□□□ 0.22
NEDD1-208ENST00000555806 SLC38A1Q9H2H9 487 aa16.43■□□□□ 0.22
NEDD1-208ENST00000555806 PLEKHF2Q9H8W4 249 aa16.43■□□□□ 0.22
NEDD1-208ENST00000555806 CELSR1Q9NYQ6 3014 aa16.43■□□□□ 0.22
NEDD1-208ENST00000555806 IGHV3-15A0A0B4J1V0 119 aa16.42■□□□□ 0.22
NEDD1-208ENST00000555806 POLR3GO15318 223 aaPredicted RBP16.42■□□□□ 0.22
NEDD1-208ENST00000555806 PRKD3O94806 890 aa16.42■□□□□ 0.22
NEDD1-208ENST00000555806 CRYGSP22914 178 aa16.42■□□□□ 0.22
NEDD1-208ENST00000555806 STX1BP61266 288 aa16.42■□□□□ 0.22
NEDD1-208ENST00000555806 C6orf10Q5SRN2 563 aa16.42■□□□□ 0.22
NEDD1-208ENST00000555806 EPGNQ6UW88 154 aa16.42■□□□□ 0.22
NEDD1-208ENST00000555806 MSANTD1Q6ZTZ1 278 aa16.42■□□□□ 0.22
NEDD1-208ENST00000555806 BEND4Q6ZU67 534 aa16.42■□□□□ 0.22
NEDD1-208ENST00000555806 TUSC5Q8IXB3 177 aa16.42■□□□□ 0.22
NEDD1-208ENST00000555806 WDR60Q8WVS4 1066 aa16.42■□□□□ 0.22
NEDD1-208ENST00000555806 PIK3IP1Q96FE7 263 aa16.42■□□□□ 0.22
NEDD1-208ENST00000555806 ITCHQ96J02 903 aa16.42■□□□□ 0.22
NEDD1-208ENST00000555806 SLCO1B3Q9NPD5 702 aa16.42■□□□□ 0.22
NEDD1-208ENST00000555806 SLC6A13Q9NSD5 602 aa16.42■□□□□ 0.22
NEDD1-208ENST00000555806 KLHL13Q9P2N7 655 aa16.42■□□□□ 0.22
NEDD1-208ENST00000555806 SPIN1Q9Y657 262 aaPredicted RBP16.42■□□□□ 0.22
NEDD1-208ENST00000555806 TEP1Q99973 2627 aaKnown RBP16.42■□□□□ 0.22
NEDD1-208ENST00000555806 A0A1W2PPR1 153 aa16.41■□□□□ 0.22
NEDD1-208ENST00000555806 ATE1O95260 518 aa16.41■□□□□ 0.22
NEDD1-208ENST00000555806 TFPIP10646 304 aa16.41■□□□□ 0.22
NEDD1-208ENST00000555806 NID1P14543 1247 aa16.41■□□□□ 0.22
NEDD1-208ENST00000555806 ENPP1P22413 925 aa16.41■□□□□ 0.22
NEDD1-208ENST00000555806 CRATP43155 626 aa16.41■□□□□ 0.22
NEDD1-208ENST00000555806 RAC3P60763 192 aa16.41■□□□□ 0.22
NEDD1-208ENST00000555806 GNA13Q14344 377 aa16.41■□□□□ 0.22
NEDD1-208ENST00000555806 GTDC1Q4AE62 458 aa16.41■□□□□ 0.22
NEDD1-208ENST00000555806 SLC43A2Q8N370 569 aa16.41■□□□□ 0.22
NEDD1-208ENST00000555806 SLC25A43Q8WUT9 341 aaPredicted RBP16.41■□□□□ 0.22
NEDD1-208ENST00000555806 CNOT9Q92600 299 aaKnown RBP16.41■□□□□ 0.22
NEDD1-208ENST00000555806 VPS33AQ96AX1 596 aa16.41■□□□□ 0.22
NEDD1-208ENST00000555806 TCF7L2Q9NQB0 619 aa16.41■□□□□ 0.22
NEDD1-208ENST00000555806 EXOSC3Q9NQT5 275 aaKnown RBP16.41■□□□□ 0.22
NEDD1-208ENST00000555806 CTPS2Q9NRF8 586 aa16.41■□□□□ 0.22
NEDD1-208ENST00000555806 ARGLU1Q9NWB6 273 aaPredicted RBP16.41■□□□□ 0.22
NEDD1-208ENST00000555806 KLHL9Q9P2J3 617 aa16.41■□□□□ 0.22
NEDD1-208ENST00000555806 P2RX2Q9UBL9 471 aa16.41■□□□□ 0.22
NEDD1-208ENST00000555806 ABCA4P78363 2273 aa16.4■□□□□ 0.22
NEDD1-208ENST00000555806 FAM234BA2RU67 622 aa16.4■□□□□ 0.22
NEDD1-208ENST00000555806 AGAP5A6NIR3 686 aa16.4■□□□□ 0.22
NEDD1-208ENST00000555806 DEFB108AA8MXU0 73 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms