RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 GRINAQ7Z429 371 aa11.31□□□□□ -0.6
SHMT2-221ENST00000555773 ZDHHC21Q8IVQ6 265 aa11.31□□□□□ -0.6
SHMT2-221ENST00000555773 GTPBP8Q8N3Z3 284 aaPredicted RBP11.31□□□□□ -0.6
SHMT2-221ENST00000555773 Q8NA96 180 aa11.31□□□□□ -0.6
SHMT2-221ENST00000555773 ZNF300Q96RE9 604 aaPredicted RBP11.31□□□□□ -0.6
SHMT2-221ENST00000555773 TAAR6Q96RI8 345 aa11.31□□□□□ -0.6
SHMT2-221ENST00000555773 PIGQQ9BRB3 760 aa11.31□□□□□ -0.6
SHMT2-221ENST00000555773 C12orf10Q9HB07 376 aa11.31□□□□□ -0.6
SHMT2-221ENST00000555773 ARMC1Q9NVT9 282 aa11.31□□□□□ -0.6
SHMT2-221ENST00000555773 SELENONQ9NZV5 590 aa11.31□□□□□ -0.6
SHMT2-221ENST00000555773 AP4S1Q9Y587 144 aa11.31□□□□□ -0.6
SHMT2-221ENST00000555773 V9GYQ6 96 aa11.31□□□□□ -0.6
SHMT2-221ENST00000555773 TRAPPC13A5PLN9 417 aa11.3□□□□□ -0.6
SHMT2-221ENST00000555773 FAM166BA8MTA8 275 aa11.3□□□□□ -0.6
SHMT2-221ENST00000555773 TFECO14948 347 aaPredicted RBP11.3□□□□□ -0.6
SHMT2-221ENST00000555773 HCN1O60741 890 aa11.3□□□□□ -0.6
SHMT2-221ENST00000555773 NTN1O95631 604 aa11.3□□□□□ -0.6
SHMT2-221ENST00000555773 PNMTP11086 282 aa11.3□□□□□ -0.6
SHMT2-221ENST00000555773 ZNF17P17021 662 aa11.3□□□□□ -0.6
SHMT2-221ENST00000555773 HTR2AP28223 471 aa11.3□□□□□ -0.6
SHMT2-221ENST00000555773 GCKP35557 465 aa11.3□□□□□ -0.6
SHMT2-221ENST00000555773 MAGEA5P43359 124 aa11.3□□□□□ -0.6
SHMT2-221ENST00000555773 SMIM11AP58511 58 aa11.3□□□□□ -0.6
SHMT2-221ENST00000555773 TAS2R41P59536 307 aa11.3□□□□□ -0.6
SHMT2-221ENST00000555773 VLDLRP98155 873 aa11.3□□□□□ -0.6
SHMT2-221ENST00000555773 ST3GAL3Q11203 375 aa11.3□□□□□ -0.6
SHMT2-221ENST00000555773 TMEM44Q2T9K0 475 aa11.3□□□□□ -0.6
SHMT2-221ENST00000555773 KRTCAP3Q53RY4 240 aa11.3□□□□□ -0.6
SHMT2-221ENST00000555773 RNFT1Q5M7Z0 435 aa11.3□□□□□ -0.6
SHMT2-221ENST00000555773 FAM180AQ6UWF9 173 aa11.3□□□□□ -0.6
SHMT2-221ENST00000555773 PLEKHM3Q6ZWE6 761 aa11.3□□□□□ -0.6
SHMT2-221ENST00000555773 TSEN54Q7Z6J9 526 aaKnown RBP11.3□□□□□ -0.6
SHMT2-221ENST00000555773 CADM2Q8N3J6 435 aa11.3□□□□□ -0.6
SHMT2-221ENST00000555773 FAM83FQ8NEG4 500 aaPredicted RBP11.3□□□□□ -0.6
SHMT2-221ENST00000555773 OR14L1PQ8NHC6 308 aa11.3□□□□□ -0.6
SHMT2-221ENST00000555773 ADAMTS16Q8TE57 1224 aa11.3□□□□□ -0.6
SHMT2-221ENST00000555773 MPP4Q96JB8 637 aa11.3□□□□□ -0.6
SHMT2-221ENST00000555773 PRRC1Q96M27 445 aa11.3□□□□□ -0.6
SHMT2-221ENST00000555773 PIP5K1AQ99755 562 aa11.3□□□□□ -0.6
SHMT2-221ENST00000555773 KLHDC3Q9BQ90 382 aa11.3□□□□□ -0.6
SHMT2-221ENST00000555773 PRR14Q9BWN1 585 aa11.3□□□□□ -0.6
SHMT2-221ENST00000555773 SERINC1Q9NRX5 453 aa11.3□□□□□ -0.6
SHMT2-221ENST00000555773 STOML1Q9UBI4 398 aa11.3□□□□□ -0.6
SHMT2-221ENST00000555773 RIMS3Q9UJD0 308 aa11.3□□□□□ -0.6
SHMT2-221ENST00000555773 ACAD8Q9UKU7 415 aa11.3□□□□□ -0.6
SHMT2-221ENST00000555773 VDAC3Q9Y277 283 aa11.3□□□□□ -0.6
SHMT2-221ENST00000555773 NINQ8N4C6 2090 aa11.3□□□□□ -0.6
SHMT2-221ENST00000555773 A0A0B4J2E0 115 aa11.29□□□□□ -0.6
SHMT2-221ENST00000555773 A0A1B0GWA3 101 aa11.29□□□□□ -0.6
SHMT2-221ENST00000555773 A0A1B0GX12 115 aa11.29□□□□□ -0.6
SHMT2-221ENST00000555773 CPSF4LA6NMK7 179 aaKnown RBP11.29□□□□□ -0.6
SHMT2-221ENST00000555773 hCG_2039718K7EN88 272 aa11.29□□□□□ -0.6
SHMT2-221ENST00000555773 HNRNPRO43390 633 aaKnown RBP11.29□□□□□ -0.6
SHMT2-221ENST00000555773 SUSD5O60279 629 aa11.29□□□□□ -0.6
SHMT2-221ENST00000555773 SEMA7AO75326 666 aa11.29□□□□□ -0.6
SHMT2-221ENST00000555773 FKBP6O75344 327 aa11.29□□□□□ -0.6
SHMT2-221ENST00000555773 KRT36O76013 467 aa11.29□□□□□ -0.6
SHMT2-221ENST00000555773 IGHG3P01860 377 aa11.29□□□□□ -0.6
SHMT2-221ENST00000555773 CHMP24386 653 aa11.29□□□□□ -0.6
SHMT2-221ENST00000555773 ELK4P28324 431 aa11.29□□□□□ -0.6
SHMT2-221ENST00000555773 TACR3P29371 465 aa11.29□□□□□ -0.6
SHMT2-221ENST00000555773 POLR2HP52434 150 aaKnown RBP11.29□□□□□ -0.6
SHMT2-221ENST00000555773 PMP22Q01453 160 aa11.29□□□□□ -0.6
SHMT2-221ENST00000555773 MERTKQ12866 999 aa11.29□□□□□ -0.6
SHMT2-221ENST00000555773 PIN1Q13526 163 aaPredicted RBP11.29□□□□□ -0.6
SHMT2-221ENST00000555773 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.29□□□□□ -0.6
SHMT2-221ENST00000555773 AAGABQ6PD74 315 aa11.29□□□□□ -0.6
SHMT2-221ENST00000555773 YRDCQ86U90 279 aaKnown RBP11.29□□□□□ -0.6
SHMT2-221ENST00000555773 SIAH3Q8IW03 269 aa11.29□□□□□ -0.6
SHMT2-221ENST00000555773 CISD2Q8N5K1 135 aaKnown RBP11.29□□□□□ -0.6
SHMT2-221ENST00000555773 PIK3C3Q8NEB9 887 aa11.29□□□□□ -0.6
SHMT2-221ENST00000555773 FAR1Q8WVX9 515 aa11.29□□□□□ -0.6
SHMT2-221ENST00000555773 SLC39A7Q92504 469 aa11.29□□□□□ -0.6
SHMT2-221ENST00000555773 SLC38A4Q969I6 547 aa11.29□□□□□ -0.6
SHMT2-221ENST00000555773 SLCO4A1Q96BD0 722 aa11.29□□□□□ -0.6
SHMT2-221ENST00000555773 C3orf49Q96BT1 292 aa11.29□□□□□ -0.6
SHMT2-221ENST00000555773 ZNF524Q96C55 264 aa11.29□□□□□ -0.6
SHMT2-221ENST00000555773 SLC41A3Q96GZ6 507 aa11.29□□□□□ -0.6
SHMT2-221ENST00000555773 FNDC11Q9BVV2 318 aa11.29□□□□□ -0.6
SHMT2-221ENST00000555773 DEFB127Q9H1M4 99 aa11.29□□□□□ -0.6
SHMT2-221ENST00000555773 ANKRD19PQ9H560 264 aa11.29□□□□□ -0.6
SHMT2-221ENST00000555773 AGPAT4Q9NRZ5 378 aa11.29□□□□□ -0.6
SHMT2-221ENST00000555773 OSGIN1Q9UJX0 560 aa11.29□□□□□ -0.6
SHMT2-221ENST00000555773 A4GNTQ9UNA3 340 aa11.29□□□□□ -0.6
SHMT2-221ENST00000555773 A0A087WUJ7 227 aa11.28□□□□□ -0.6
SHMT2-221ENST00000555773 TRGV5A0A0B4J1U4 118 aa11.28□□□□□ -0.6
SHMT2-221ENST00000555773 A0A1B0GVC2 190 aa11.28□□□□□ -0.6
SHMT2-221ENST00000555773 A0A1W2PRQ8 180 aa11.28□□□□□ -0.6
SHMT2-221ENST00000555773 OR2M5A3KFT3 312 aa11.28□□□□□ -0.6
SHMT2-221ENST00000555773 NPIPA5E9PKD4 350 aa11.28□□□□□ -0.6
SHMT2-221ENST00000555773 FFAR1O14842 300 aa11.28□□□□□ -0.6
SHMT2-221ENST00000555773 ADAMDEC1O15204 470 aa11.28□□□□□ -0.6
SHMT2-221ENST00000555773 ZNF208O43345 1280 aa11.28□□□□□ -0.6
SHMT2-221ENST00000555773 CHP2O43745 196 aa11.28□□□□□ -0.6
SHMT2-221ENST00000555773 ENTPD5O75356 428 aa11.28□□□□□ -0.6
SHMT2-221ENST00000555773 PRSS23O95084 383 aa11.28□□□□□ -0.6
SHMT2-221ENST00000555773 ACTL6AO96019 429 aa11.28□□□□□ -0.6
SHMT2-221ENST00000555773 FCGR1AP12314 374 aa11.28□□□□□ -0.6
SHMT2-221ENST00000555773 CXCR1P25024 350 aa11.28□□□□□ -0.6
SHMT2-221ENST00000555773 MST1P26927 711 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms