RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 RBM14Q96PK6 669 aaKnown RBP4.04□□□□□ -1.76
VRK1-205ENST00000555402 GON7Q9BXV9 100 aa4.04□□□□□ -1.76
VRK1-205ENST00000555402 GCOM2Q9BZD3 368 aaPredicted RBP4.04□□□□□ -1.76
VRK1-205ENST00000555402 NAT10Q9H0A0 1025 aaKnown RBP4.04□□□□□ -1.76
VRK1-205ENST00000555402 GLIPR2Q9H4G4 154 aa4.04□□□□□ -1.76
VRK1-205ENST00000555402 ZNF385DQ9H6B1 395 aa4.04□□□□□ -1.76
VRK1-205ENST00000555402 DCAF16Q9NXF7 216 aa4.04□□□□□ -1.76
VRK1-205ENST00000555402 SIGLEC8Q9NYZ4 499 aa4.04□□□□□ -1.76
VRK1-205ENST00000555402 ZNF107Q9UII5 783 aaPredicted RBP4.04□□□□□ -1.76
VRK1-205ENST00000555402 SCML2Q9UQR0 700 aa4.04□□□□□ -1.76
VRK1-205ENST00000555402 AK6Q9Y3D8 172 aaKnown RBP4.04□□□□□ -1.76
VRK1-205ENST00000555402 FLVCR1Q9Y5Y0 555 aa4.04□□□□□ -1.76
VRK1-205ENST00000555402 PP2D1A8MPX8 630 aa4.03□□□□□ -1.76
VRK1-205ENST00000555402 CXCL11O14625 94 aa4.03□□□□□ -1.76
VRK1-205ENST00000555402 POLR2DO15514 142 aaKnown RBP4.03□□□□□ -1.76
VRK1-205ENST00000555402 BCL2L11O43521 198 aa4.03□□□□□ -1.76
VRK1-205ENST00000555402 POLR2EP19388 210 aaKnown RBP4.03□□□□□ -1.76
VRK1-205ENST00000555402 IMPDH1P20839 514 aa4.03□□□□□ -1.76
VRK1-205ENST00000555402 MMP11P24347 488 aa4.03□□□□□ -1.76
VRK1-205ENST00000555402 HMGB2P26583 209 aaKnown RBP4.03□□□□□ -1.76
VRK1-205ENST00000555402 HOXD10P28358 340 aa4.03□□□□□ -1.76
VRK1-205ENST00000555402 YWHABP31946 246 aaKnown RBP4.03□□□□□ -1.76
VRK1-205ENST00000555402 CD80P33681 288 aa4.03□□□□□ -1.76
VRK1-205ENST00000555402 UGT1A3P35503 534 aa4.03□□□□□ -1.76
VRK1-205ENST00000555402 STARP49675 285 aa4.03□□□□□ -1.76
VRK1-205ENST00000555402 HSPA2P54652 639 aa4.03□□□□□ -1.76
VRK1-205ENST00000555402 RIPK4P57078 832 aa4.03□□□□□ -1.76
VRK1-205ENST00000555402 TNFRSF17Q02223 184 aa4.03□□□□□ -1.76
VRK1-205ENST00000555402 BCL2L1Q07817 233 aa4.03□□□□□ -1.76
VRK1-205ENST00000555402 ELAVL3Q14576 367 aaKnown RBP4.03□□□□□ -1.76
VRK1-205ENST00000555402 BEND3Q5T5X7 828 aa4.03□□□□□ -1.76
VRK1-205ENST00000555402 METTL11BQ5VVY1 283 aa4.03□□□□□ -1.76
VRK1-205ENST00000555402 NLRP9Q7RTR0 991 aa4.03□□□□□ -1.76
VRK1-205ENST00000555402 MARCH9Q86YJ5 346 aa4.03□□□□□ -1.76
VRK1-205ENST00000555402 SLC35F2Q8IXU6 374 aa4.03□□□□□ -1.76
VRK1-205ENST00000555402 SLC41A3Q96GZ6 507 aa4.03□□□□□ -1.76
VRK1-205ENST00000555402 MAGT1Q9H0U3 335 aa4.03□□□□□ -1.76
VRK1-205ENST00000555402 RHBGQ9H310 441 aa4.03□□□□□ -1.76
VRK1-205ENST00000555402 LRRN3Q9H3W5 708 aa4.03□□□□□ -1.76
VRK1-205ENST00000555402 FANCFQ9NPI8 374 aa4.03□□□□□ -1.76
VRK1-205ENST00000555402 SMOXQ9NWM0 555 aa4.03□□□□□ -1.76
VRK1-205ENST00000555402 OR1A1Q9P1Q5 309 aa4.03□□□□□ -1.76
VRK1-205ENST00000555402 PDE10AQ9Y233 779 aa4.03□□□□□ -1.76
VRK1-205ENST00000555402 RASD1Q9Y272 281 aa4.03□□□□□ -1.76
VRK1-205ENST00000555402 PLLPQ9Y342 182 aa4.03□□□□□ -1.76
VRK1-205ENST00000555402 SYNRGQ9UMZ2 1314 aa4.02□□□□□ -1.77
VRK1-205ENST00000555402 TAPBPO15533 448 aa4.02□□□□□ -1.77
VRK1-205ENST00000555402 PRKYO43930 277 aa4.02□□□□□ -1.77
VRK1-205ENST00000555402 HCN1O60741 890 aa4.02□□□□□ -1.77
VRK1-205ENST00000555402 GNA14O95837 355 aa4.02□□□□□ -1.77
VRK1-205ENST00000555402 RNH1P13489 461 aaKnown RBP4.02□□□□□ -1.77
VRK1-205ENST00000555402 FASP25445 335 aa4.02□□□□□ -1.77
VRK1-205ENST00000555402 ANXA13P27216 316 aa4.02□□□□□ -1.77
VRK1-205ENST00000555402 GCAP28676 217 aa4.02□□□□□ -1.77
VRK1-205ENST00000555402 FGF9P31371 208 aaPredicted RBP4.02□□□□□ -1.77
VRK1-205ENST00000555402 GRIA1P42261 906 aa4.02□□□□□ -1.77
VRK1-205ENST00000555402 PRKXP51817 358 aa4.02□□□□□ -1.77
VRK1-205ENST00000555402 SLC25A30Q5SVS4 291 aa4.02□□□□□ -1.77
VRK1-205ENST00000555402 OR4F3Q6IEY1 312 aa4.02□□□□□ -1.77
VRK1-205ENST00000555402 ZNF774Q6NX45 483 aa4.02□□□□□ -1.77
VRK1-205ENST00000555402 CCDC137Q6PK04 289 aaKnown RBP4.02□□□□□ -1.77
VRK1-205ENST00000555402 CCDC65Q8IXS2 484 aa4.02□□□□□ -1.77
VRK1-205ENST00000555402 CD177Q8N6Q3 437 aa4.02□□□□□ -1.77
VRK1-205ENST00000555402 OR4D9Q8NGE8 314 aa4.02□□□□□ -1.77
VRK1-205ENST00000555402 OR5D13Q8NGL4 314 aa4.02□□□□□ -1.77
VRK1-205ENST00000555402 OR2A12Q8NGT7 310 aa4.02□□□□□ -1.77
VRK1-205ENST00000555402 COQ2Q96H96 371 aa4.02□□□□□ -1.77
VRK1-205ENST00000555402 VSIG2Q96IQ7 327 aa4.02□□□□□ -1.77
VRK1-205ENST00000555402 ZNF414Q96IQ9 312 aa4.02□□□□□ -1.77
VRK1-205ENST00000555402 SLC35A5Q9BS91 424 aa4.02□□□□□ -1.77
VRK1-205ENST00000555402 CHIAQ9BZP6 476 aa4.02□□□□□ -1.77
VRK1-205ENST00000555402 SMYD3Q9H7B4 428 aa4.02□□□□□ -1.77
VRK1-205ENST00000555402 RPS10P5Q9NQ39 176 aa4.02□□□□□ -1.77
VRK1-205ENST00000555402 POLE4Q9NR33 117 aa4.02□□□□□ -1.77
VRK1-205ENST00000555402 WARS2Q9UGM6 360 aaKnown RBP4.02□□□□□ -1.77
VRK1-205ENST00000555402 ANGPTL2Q9UKU9 493 aa4.02□□□□□ -1.77
VRK1-205ENST00000555402 ASB3Q9Y575 518 aa4.02□□□□□ -1.77
VRK1-205ENST00000555402 TIMM10BQ9Y5J6 103 aa4.02□□□□□ -1.77
VRK1-205ENST00000555402 CFAP65Q6ZU64 1925 aaKnown RBP4.01□□□□□ -1.77
VRK1-205ENST00000555402 IGLV8-61A0A075B6I0 122 aa4.01□□□□□ -1.77
VRK1-205ENST00000555402 K7ENP7 123 aa4.01□□□□□ -1.77
VRK1-205ENST00000555402 OR10H3O60404 316 aa4.01□□□□□ -1.77
VRK1-205ENST00000555402 B4GALT2O60909 372 aa4.01□□□□□ -1.77
VRK1-205ENST00000555402 PALMO75781 387 aa4.01□□□□□ -1.77
VRK1-205ENST00000555402 SNX4O95219 450 aa4.01□□□□□ -1.77
VRK1-205ENST00000555402 STSP08842 583 aa4.01□□□□□ -1.77
VRK1-205ENST00000555402 NCK1P16333 377 aa4.01□□□□□ -1.77
VRK1-205ENST00000555402 RPL13AP40429 203 aaKnown RBP4.01□□□□□ -1.77
VRK1-205ENST00000555402 CASP4P49662 377 aa4.01□□□□□ -1.77
VRK1-205ENST00000555402 RPS8P62241 208 aaKnown RBP4.01□□□□□ -1.77
VRK1-205ENST00000555402 OC90Q02509 493 aaPredicted RBP4.01□□□□□ -1.77
VRK1-205ENST00000555402 C1orf61Q13536 156 aa4.01□□□□□ -1.77
VRK1-205ENST00000555402 DPYSL2Q16555 572 aa4.01□□□□□ -1.77
VRK1-205ENST00000555402 VITQ6UXI7 678 aa4.01□□□□□ -1.77
VRK1-205ENST00000555402 DNM1P46Q6ZS02 220 aa4.01□□□□□ -1.77
VRK1-205ENST00000555402 APOBEC3FQ8IUX4 373 aaKnown RBP4.01□□□□□ -1.77
VRK1-205ENST00000555402 NRMQ8IXM6 262 aa4.01□□□□□ -1.77
VRK1-205ENST00000555402 GPD1LQ8N335 351 aa4.01□□□□□ -1.77
VRK1-205ENST00000555402 OR13C2Q8NGS9 318 aa4.01□□□□□ -1.77
VRK1-205ENST00000555402 RAPGEF5Q92565 580 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms