RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 TAS2R38P59533 333 aa9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 MRPS10P82664 201 aaKnown RBP9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 RPL6Q02878 288 aaKnown RBP9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 RUNX3Q13761 415 aa9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 INSL4Q14641 139 aa9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 CST6Q15828 149 aa9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 SHEQ5VZ18 495 aa9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 COMTD1Q86VU5 262 aa9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 LINC01555Q8NAE3 123 aa9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 BVESQ8NE79 360 aa9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 OR56A1Q8NGH5 318 aa9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 KAT2AQ92830 837 aa9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 FGF13Q92913 245 aa9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 FBXW5Q969U6 566 aa9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 ELP4Q96EB1 424 aa9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 ZNF416Q9BWM5 594 aa9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 GPN1Q9HCN4 374 aaPredicted RBP9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 BRD7Q9NPI1 651 aa9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 PCDHB16Q9NRJ7 776 aa9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 TM7SF3Q9NS93 570 aa9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 ZCCHC3Q9NUD5 404 aaKnown RBP9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 PRELID3BQ9Y3B1 194 aa9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 MDC1Q14676 2089 aaKnown RBP9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 MAN2B1O00754 1011 aa9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 MID1O15344 667 aa9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 SULT1B1O43704 296 aa9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 LCMT2O60294 686 aaKnown RBP9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 GALR3O60755 368 aaPredicted RBP9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 RP2O75695 350 aa9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 AQP8O94778 261 aa9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 CD1AP06126 327 aa9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 CD3GP09693 182 aa9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 GNSP15586 552 aa9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 PPP3CBP16298 524 aa9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 NDUFV2P19404 249 aa9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 SELENOPP49908 381 aa9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 CCR6P51684 374 aa9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 NCBP2P52298 156 aaKnown RBP eCLIP9.92□□□□□ -0.825e-17■□□□□ 10.6
MTHFD1-210ENST00000555252 DGCR2P98153 550 aa9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 ENPP2Q13822 863 aa9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 IRF4Q15306 451 aa9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 FAM180BQ6P0A1 224 aa9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 NIPAL3Q6P499 406 aa9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 IL20RBQ6UXL0 311 aa9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 GLDNQ6ZMI3 551 aaPredicted RBP9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 CFAP77Q6ZQR2 320 aa9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 MEPCEQ7L2J0 689 aaKnown RBP9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 SIRT6Q8N6T7 355 aa9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 C12orf76Q8N812 135 aaPredicted RBP9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 OR2A1Q8NGT9 310 aa9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 MOSPD2Q8NHP6 518 aa9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 ABHD4Q8TB40 342 aa9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 XAGE5Q8WWM1 108 aa9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 PHYHIPQ92561 330 aa9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 FCRL4Q96PJ5 515 aa9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 DDOQ99489 341 aa9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 SARGQ9BW04 601 aa9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 MRPS30Q9NP92 439 aaKnown RBP9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 HINT3Q9NQE9 182 aaKnown RBP9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 TRPC4Q9UBN4 977 aa9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 SLC13A4Q9UKG4 626 aa9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 CA5BQ9Y2D0 317 aa9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 TCF20Q9UGU0 1960 aaKnown RBP9.92□□□□□ -0.82
MTHFD1-210ENST00000555252 DAPL1A0PJW8 107 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 OR2M5A3KFT3 312 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 SLC22A31A6NKX4 558 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 MPTX1A8MV57 137 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 MCRIP1C9JLW8 97 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 ARL6IP5O75915 188 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 OR5F1O95221 314 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 HPXP02790 462 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 APODP05090 189 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 S100A11P31949 105 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 GJA4P35212 333 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 NRG3P56975 720 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 RAB8AP61006 207 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 S100A12P80511 92 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 TGM3Q08188 693 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 ZNF169Q14929 603 aaPredicted RBP9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 UBE2NLQ5JXB2 153 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 OLFML2AQ68BL7 652 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 MRM1Q6IN84 353 aaKnown RBP9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 RPL13AP3Q6NVV1 102 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 B3GLCTQ6Y288 498 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 MBOAT2Q6ZWT7 520 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 KANSL1Q7Z3B3 1105 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 CEACAM19Q7Z692 300 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 SFTPA1Q8IWL2 248 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 YAF2Q8IY57 180 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 HDDC3Q8N4P3 179 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 OR11G2Q8NGC1 345 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 OR51Q1Q8NH59 317 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 SLC2A12Q8TD20 617 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 BRIX1Q8TDN6 353 aaKnown RBP9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 C15orf40Q8WUR7 153 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 RIT1Q92963 219 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 ELMOD3Q96FG2 381 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 FAM46AQ96IP4 442 aaKnown RBP9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 YIPF4Q9BSR8 244 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 MRI1Q9BV20 369 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms