RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 GABRG1Q8N1C3 465 aa4.36□□□□□ -1.71
VRK1-203ENST00000555067 LINC01561Q8N1V8 128 aa4.36□□□□□ -1.71
VRK1-203ENST00000555067 TRIML2Q8N7C3 387 aa4.36□□□□□ -1.71
VRK1-203ENST00000555067 ASCC1Q8N9N2 400 aaKnown RBP4.36□□□□□ -1.71
VRK1-203ENST00000555067 OR5L2Q8NGL0 311 aa4.36□□□□□ -1.71
VRK1-203ENST00000555067 OR1B1Q8NGR6 318 aa4.36□□□□□ -1.71
VRK1-203ENST00000555067 OR2T6Q8NHC8 308 aa4.36□□□□□ -1.71
VRK1-203ENST00000555067 MARCH1Q8TCQ1 289 aa4.36□□□□□ -1.71
VRK1-203ENST00000555067 ACMSDQ8TDX5 336 aa4.36□□□□□ -1.71
VRK1-203ENST00000555067 MAIP1Q8WWC4 291 aa4.36□□□□□ -1.71
VRK1-203ENST00000555067 ARNTL2Q8WYA1 636 aa4.36□□□□□ -1.71
VRK1-203ENST00000555067 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.36□□□□□ -1.71
VRK1-203ENST00000555067 TADA1Q96BN2 335 aa4.36□□□□□ -1.71
VRK1-203ENST00000555067 FAM218AQ96MZ4 157 aa4.36□□□□□ -1.71
VRK1-203ENST00000555067 NKX3-1Q99801 234 aaPredicted RBP4.36□□□□□ -1.71
VRK1-203ENST00000555067 FEM1AQ9BSK4 669 aa4.36□□□□□ -1.71
VRK1-203ENST00000555067 CABLES2Q9BTV7 478 aa4.36□□□□□ -1.71
VRK1-203ENST00000555067 ELOVL6Q9H5J4 265 aa4.36□□□□□ -1.71
VRK1-203ENST00000555067 ATP13A3Q9H7F0 1226 aa4.36□□□□□ -1.71
VRK1-203ENST00000555067 Q9HAA7 133 aa4.36□□□□□ -1.71
VRK1-203ENST00000555067 PLEKHA3Q9HB20 300 aa4.36□□□□□ -1.71
VRK1-203ENST00000555067 ANGPTL2Q9UKU9 493 aa4.36□□□□□ -1.71
VRK1-203ENST00000555067 EXOSC1Q9Y3B2 195 aaKnown RBP4.36□□□□□ -1.71
VRK1-203ENST00000555067 BZW2Q9Y6E2 419 aaKnown RBP4.36□□□□□ -1.71
VRK1-203ENST00000555067 IGHV4-61A0A0C4DH41 118 aa4.35□□□□□ -1.71
VRK1-203ENST00000555067 A0A0J9YYE9 177 aa4.35□□□□□ -1.71
VRK1-203ENST00000555067 TRBV11-1A0A0K0K1C0 115 aa4.35□□□□□ -1.71
VRK1-203ENST00000555067 FRG2CA6NGY1 282 aa4.35□□□□□ -1.71
VRK1-203ENST00000555067 NEDD8-MDP1E9PL57 170 aa4.35□□□□□ -1.71
VRK1-203ENST00000555067 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.35□□□□□ -1.71
VRK1-203ENST00000555067 TM9SF1O15321 606 aa4.35□□□□□ -1.71
VRK1-203ENST00000555067 MSH4O15457 936 aa4.35□□□□□ -1.71
VRK1-203ENST00000555067 PPIHO43447 177 aaKnown RBP4.35□□□□□ -1.71
VRK1-203ENST00000555067 DIRAS1O95057 198 aa4.35□□□□□ -1.71
VRK1-203ENST00000555067 POP4O95707 220 aaKnown RBP4.35□□□□□ -1.71
VRK1-203ENST00000555067 IGHV4-59P01825 116 aa4.35□□□□□ -1.71
VRK1-203ENST00000555067 TRBC1P01850 177 aa4.35□□□□□ -1.71
VRK1-203ENST00000555067 H2AFXP16104 143 aaPredicted RBP4.35□□□□□ -1.71
VRK1-203ENST00000555067 IMPDH1P20839 514 aa4.35□□□□□ -1.71
VRK1-203ENST00000555067 CDH5P33151 784 aaPredicted RBP4.35□□□□□ -1.71
VRK1-203ENST00000555067 SAA4P35542 130 aa4.35□□□□□ -1.71
VRK1-203ENST00000555067 ZFP36L2P47974 494 aaKnown RBP4.35□□□□□ -1.71
VRK1-203ENST00000555067 XGP55808 180 aa4.35□□□□□ -1.71
VRK1-203ENST00000555067 SNRPD1P62314 119 aaKnown RBP4.35□□□□□ -1.71
VRK1-203ENST00000555067 IL9RQ01113 521 aa4.35□□□□□ -1.71
VRK1-203ENST00000555067 PPIL2Q13356 520 aa4.35□□□□□ -1.71
VRK1-203ENST00000555067 KNOP1Q1ED39 458 aaKnown RBP4.35□□□□□ -1.71
VRK1-203ENST00000555067 SLC5A12Q1EHB4 618 aa4.35□□□□□ -1.71
VRK1-203ENST00000555067 FAM83EQ2M2I3 478 aa4.35□□□□□ -1.71
VRK1-203ENST00000555067 SLC25A52Q3SY17 297 aa4.35□□□□□ -1.71
VRK1-203ENST00000555067 TEX44Q53QW1 395 aa4.35□□□□□ -1.71
VRK1-203ENST00000555067 SLC22A10Q63ZE4 541 aa4.35□□□□□ -1.71
VRK1-203ENST00000555067 PAQR6Q6TCH4 344 aa4.35□□□□□ -1.71
VRK1-203ENST00000555067 COMTD1Q86VU5 262 aa4.35□□□□□ -1.71
VRK1-203ENST00000555067 VRK2Q86Y07 508 aa4.35□□□□□ -1.71
VRK1-203ENST00000555067 HPS6Q86YV9 775 aa4.35□□□□□ -1.71
VRK1-203ENST00000555067 OR10A7Q8NGE5 316 aa4.35□□□□□ -1.71
VRK1-203ENST00000555067 OR4D10Q8NGI6 311 aa4.35□□□□□ -1.71
VRK1-203ENST00000555067 RPLP0P6Q8NHW5 317 aa4.35□□□□□ -1.71
VRK1-203ENST00000555067 RHEBL1Q8TAI7 183 aa4.35□□□□□ -1.71
VRK1-203ENST00000555067 MSANTD3Q96H12 275 aa4.35□□□□□ -1.71
VRK1-203ENST00000555067 SYT11Q9BT88 431 aa4.35□□□□□ -1.71
VRK1-203ENST00000555067 GPR174Q9BXC1 333 aa4.35□□□□□ -1.71
VRK1-203ENST00000555067 PINK1Q9BXM7 581 aa4.35□□□□□ -1.71
VRK1-203ENST00000555067 DUSP16Q9BY84 665 aa4.35□□□□□ -1.71
VRK1-203ENST00000555067 ANKRD19PQ9H560 264 aa4.35□□□□□ -1.71
VRK1-203ENST00000555067 MRPS30Q9NP92 439 aaKnown RBP4.35□□□□□ -1.71
VRK1-203ENST00000555067 NT5MQ9NPB1 228 aa4.35□□□□□ -1.71
VRK1-203ENST00000555067 MAN2C1Q9NTJ4 1040 aa4.35□□□□□ -1.71
VRK1-203ENST00000555067 STARD10Q9Y365 291 aa4.35□□□□□ -1.71
VRK1-203ENST00000555067 DHRS7Q9Y394 339 aa4.35□□□□□ -1.71
VRK1-203ENST00000555067 ALG6Q9Y672 507 aa4.35□□□□□ -1.71
VRK1-203ENST00000555067 COL5A2P05997 1499 aaPredicted RBP4.35□□□□□ -1.71
VRK1-203ENST00000555067 NPIPA5A0A0B4J1W7 369 aa4.34□□□□□ -1.71
VRK1-203ENST00000555067 A0A1W2PPV9 198 aa4.34□□□□□ -1.71
VRK1-203ENST00000555067 TMCO5BA8MYB1 307 aa4.34□□□□□ -1.71
VRK1-203ENST00000555067 NPIPA5E9PKD4 350 aa4.34□□□□□ -1.71
VRK1-203ENST00000555067 LATO43561 262 aa4.34□□□□□ -1.71
VRK1-203ENST00000555067 RAMP3O60896 148 aa4.34□□□□□ -1.71
VRK1-203ENST00000555067 DUSP11O75319 330 aaKnown RBP4.34□□□□□ -1.71
VRK1-203ENST00000555067 OR2J3O76001 311 aa4.34□□□□□ -1.71
VRK1-203ENST00000555067 ZFAND5O76080 213 aa4.34□□□□□ -1.71
VRK1-203ENST00000555067 SNAI1O95863 264 aaPredicted RBP4.34□□□□□ -1.71
VRK1-203ENST00000555067 PLEKP08567 350 aaPredicted RBP4.34□□□□□ -1.71
VRK1-203ENST00000555067 HBQ1P09105 142 aa4.34□□□□□ -1.71
VRK1-203ENST00000555067 CT62P0C5K7 136 aa4.34□□□□□ -1.71
VRK1-203ENST00000555067 KITLGP21583 273 aa4.34□□□□□ -1.71
VRK1-203ENST00000555067 ACLYP53396 1101 aa4.34□□□□□ -1.71
VRK1-203ENST00000555067 SLC8A3P57103 927 aa4.34□□□□□ -1.71
VRK1-203ENST00000555067 CSNK2BP67870 215 aa4.34□□□□□ -1.71
VRK1-203ENST00000555067 OTUD4Q01804 1114 aaKnown RBP4.34□□□□□ -1.71
VRK1-203ENST00000555067 PAX5Q02548 391 aa4.34□□□□□ -1.71
VRK1-203ENST00000555067 KLRB1Q12918 225 aa4.34□□□□□ -1.71
VRK1-203ENST00000555067 SLAQ13239 276 aa4.34□□□□□ -1.71
VRK1-203ENST00000555067 XRCC4Q13426 336 aa4.34□□□□□ -1.71
VRK1-203ENST00000555067 VGLL4Q14135 290 aa4.34□□□□□ -1.71
VRK1-203ENST00000555067 ITIH4Q14624 930 aa4.34□□□□□ -1.71
VRK1-203ENST00000555067 ZNF239Q16600 458 aaKnown RBP4.34□□□□□ -1.71
VRK1-203ENST00000555067 UNC50Q53HI1 259 aa4.34□□□□□ -1.71
VRK1-203ENST00000555067 DMRTC1Q5HYR2 192 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms