RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 CTU2Q2VPK5 515 aaKnown RBP9.56□□□□□ -0.88
SHMT2-213ENST00000554600 HSP90B2PQ58FF3 399 aa9.56□□□□□ -0.88
SHMT2-213ENST00000554600 CDH24Q86UP0 819 aa9.56□□□□□ -0.88
SHMT2-213ENST00000554600 ARFGAP2Q8N6H7 521 aa9.56□□□□□ -0.88
SHMT2-213ENST00000554600 FAM222BQ8WU58 562 aa9.56□□□□□ -0.88
SHMT2-213ENST00000554600 ST8SIA1Q92185 356 aa9.56□□□□□ -0.88
SHMT2-213ENST00000554600 STARD4Q96DR4 205 aa9.56□□□□□ -0.88
SHMT2-213ENST00000554600 SPDL1Q96EA4 605 aa9.56□□□□□ -0.88
SHMT2-213ENST00000554600 ADGRG7Q96K78 797 aa9.56□□□□□ -0.88
SHMT2-213ENST00000554600 OR5B2Q96R09 309 aa9.56□□□□□ -0.88
SHMT2-213ENST00000554600 GPATCH1Q9BRR8 931 aaKnown RBP9.56□□□□□ -0.88
SHMT2-213ENST00000554600 POLDIP3Q9BY77 421 aaKnown RBP9.56□□□□□ -0.88
SHMT2-213ENST00000554600 SAP130Q9H0E3 1048 aa9.56□□□□□ -0.88
SHMT2-213ENST00000554600 SLC38A1Q9H2H9 487 aa9.56□□□□□ -0.88
SHMT2-213ENST00000554600 RAD21L1Q9H4I0 556 aa9.56□□□□□ -0.88
SHMT2-213ENST00000554600 MTHFD2LQ9H903 347 aaPredicted RBP9.56□□□□□ -0.88
SHMT2-213ENST00000554600 RNF122Q9H9V4 155 aa9.56□□□□□ -0.88
SHMT2-213ENST00000554600 SERINC1Q9NRX5 453 aa9.56□□□□□ -0.88
SHMT2-213ENST00000554600 ZNF446Q9NWS9 450 aa9.56□□□□□ -0.88
SHMT2-213ENST00000554600 DNAJB12Q9NXW2 375 aaKnown RBP9.56□□□□□ -0.88
SHMT2-213ENST00000554600 CALML5Q9NZT1 146 aa9.56□□□□□ -0.88
SHMT2-213ENST00000554600 JKAMPQ9P055 326 aa9.56□□□□□ -0.88
SHMT2-213ENST00000554600 PCDHB14Q9Y5E9 798 aa9.56□□□□□ -0.88
SHMT2-213ENST00000554600 HRNRQ86YZ3 2850 aaPredicted RBP9.56□□□□□ -0.88
SHMT2-213ENST00000554600 A0A096LPI6 279 aa9.55□□□□□ -0.88
SHMT2-213ENST00000554600 A0A0G2JND7 137 aa9.55□□□□□ -0.88
SHMT2-213ENST00000554600 A0A1W2PNR3 127 aa9.55□□□□□ -0.88
SHMT2-213ENST00000554600 C5orf58C9J3I9 102 aa9.55□□□□□ -0.88
SHMT2-213ENST00000554600 CLIC1O00299 241 aa9.55□□□□□ -0.88
SHMT2-213ENST00000554600 CASKO14936 926 aa9.55□□□□□ -0.88
SHMT2-213ENST00000554600 ADAMDEC1O15204 470 aa9.55□□□□□ -0.88
SHMT2-213ENST00000554600 EFNA2O43921 213 aa9.55□□□□□ -0.88
SHMT2-213ENST00000554600 BCAS1O75363 584 aaPredicted RBP9.55□□□□□ -0.88
SHMT2-213ENST00000554600 DBIP07108 87 aaKnown RBP9.55□□□□□ -0.88
SHMT2-213ENST00000554600 GUSBP08236 651 aa9.55□□□□□ -0.88
SHMT2-213ENST00000554600 PABPC4LP0CB38 370 aaKnown RBP9.55□□□□□ -0.88
SHMT2-213ENST00000554600 POU2F1P14859 743 aa9.55□□□□□ -0.88
SHMT2-213ENST00000554600 CCNA2P20248 432 aa9.55□□□□□ -0.88
SHMT2-213ENST00000554600 PGM1P36871 562 aa9.55□□□□□ -0.88
SHMT2-213ENST00000554600 KIR2DL2P43627 348 aaPredicted RBP9.55□□□□□ -0.88
SHMT2-213ENST00000554600 CRISP3P54108 245 aa9.55□□□□□ -0.88
SHMT2-213ENST00000554600 SORDQ00796 357 aa9.55□□□□□ -0.88
SHMT2-213ENST00000554600 SQLEQ14534 574 aa9.55□□□□□ -0.88
SHMT2-213ENST00000554600 RPS26P11Q5JNZ5 115 aaPredicted RBP9.55□□□□□ -0.88
SHMT2-213ENST00000554600 GTF2IRD2BQ6EKJ0 949 aa9.55□□□□□ -0.88
SHMT2-213ENST00000554600 C3orf33Q6P1S2 294 aa9.55□□□□□ -0.88
SHMT2-213ENST00000554600 BLOC1S3Q6QNY0 202 aa9.55□□□□□ -0.88
SHMT2-213ENST00000554600 FAM214BQ7L5A3 538 aa9.55□□□□□ -0.88
SHMT2-213ENST00000554600 GTF2IRD2Q86UP8 949 aa9.55□□□□□ -0.88
SHMT2-213ENST00000554600 PEX5LQ8IYB4 626 aa9.55□□□□□ -0.88
SHMT2-213ENST00000554600 OIT3Q8WWZ8 545 aa9.55□□□□□ -0.88
SHMT2-213ENST00000554600 CNOT9Q92600 299 aaKnown RBP9.55□□□□□ -0.88
SHMT2-213ENST00000554600 GTF2H4Q92759 462 aa9.55□□□□□ -0.88
SHMT2-213ENST00000554600 CPNE4Q96A23 557 aaPredicted RBP9.55□□□□□ -0.88
SHMT2-213ENST00000554600 GMPPAQ96IJ6 420 aaPredicted RBP9.55□□□□□ -0.88
SHMT2-213ENST00000554600 SLC39A3Q9BRY0 314 aa9.55□□□□□ -0.88
SHMT2-213ENST00000554600 PAIP1Q9H074 479 aaKnown RBP9.55□□□□□ -0.88
SHMT2-213ENST00000554600 C12orf49Q9H741 205 aa9.55□□□□□ -0.88
SHMT2-213ENST00000554600 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.55□□□□□ -0.88
SHMT2-213ENST00000554600 NDRG3Q9UGV2 375 aa9.55□□□□□ -0.88
SHMT2-213ENST00000554600 ARID1AO14497 2285 aa9.55□□□□□ -0.88
SHMT2-213ENST00000554600 OTOGQ6ZRI0 2925 aa9.55□□□□□ -0.88
SHMT2-213ENST00000554600 F8P00451 2351 aa9.55□□□□□ -0.88
SHMT2-213ENST00000554600 IGHV3-15A0A0B4J1V0 119 aa9.54□□□□□ -0.88
SHMT2-213ENST00000554600 AGAP5A6NIR3 686 aa9.54□□□□□ -0.88
SHMT2-213ENST00000554600 A6NNC1 897 aa9.54□□□□□ -0.88
SHMT2-213ENST00000554600 EDF1O60869 148 aaKnown RBP9.54□□□□□ -0.88
SHMT2-213ENST00000554600 EPXP11678 715 aa9.54□□□□□ -0.88
SHMT2-213ENST00000554600 UQCRBP14927 111 aa9.54□□□□□ -0.88
SHMT2-213ENST00000554600 CD79BP40259 229 aa9.54□□□□□ -0.88
SHMT2-213ENST00000554600 MAGEA8P43361 318 aa9.54□□□□□ -0.88
SHMT2-213ENST00000554600 IDH2P48735 452 aaKnown RBP9.54□□□□□ -0.88
SHMT2-213ENST00000554600 MRPL19P49406 292 aaKnown RBP9.54□□□□□ -0.88
SHMT2-213ENST00000554600 ATP4BP51164 291 aa9.54□□□□□ -0.88
SHMT2-213ENST00000554600 FAM27E3Q08E93 113 aa9.54□□□□□ -0.88
SHMT2-213ENST00000554600 SF3A3Q12874 501 aaKnown RBP eCLIP9.54□□□□□ -0.881e-13■■■□□ 16.4
SHMT2-213ENST00000554600 ZNF239Q16600 458 aaKnown RBP9.54□□□□□ -0.88
SHMT2-213ENST00000554600 SLC25A53Q5H9E4 307 aa9.54□□□□□ -0.88
SHMT2-213ENST00000554600 TMEM201Q5SNT2 666 aa9.54□□□□□ -0.88
SHMT2-213ENST00000554600 MRPL2Q5T653 305 aaKnown RBP9.54□□□□□ -0.88
SHMT2-213ENST00000554600 PLEKHM3Q6ZWE6 761 aa9.54□□□□□ -0.88
SHMT2-213ENST00000554600 FCRLAQ7L513 359 aa9.54□□□□□ -0.88
SHMT2-213ENST00000554600 VRK2Q86Y07 508 aa9.54□□□□□ -0.88
SHMT2-213ENST00000554600 FUNDC1Q8IVP5 155 aa9.54□□□□□ -0.88
SHMT2-213ENST00000554600 CMIPQ8IY22 773 aa9.54□□□□□ -0.88
SHMT2-213ENST00000554600 ZNF610Q8N9Z0 462 aa9.54□□□□□ -0.88
SHMT2-213ENST00000554600 FAM71CQ8NEG0 241 aa9.54□□□□□ -0.88
SHMT2-213ENST00000554600 OR6K3Q8NGY3 331 aa9.54□□□□□ -0.88
SHMT2-213ENST00000554600 OR52P1PQ8NH57 321 aa9.54□□□□□ -0.88
SHMT2-213ENST00000554600 SLC38A5Q8WUX1 472 aa9.54□□□□□ -0.88
SHMT2-213ENST00000554600 ZNF524Q96C55 264 aa9.54□□□□□ -0.88
SHMT2-213ENST00000554600 DNAJA3Q96EY1 480 aa9.54□□□□□ -0.88
SHMT2-213ENST00000554600 TMEM19Q96HH6 336 aa9.54□□□□□ -0.88
SHMT2-213ENST00000554600 SRXN1Q9BYN0 137 aa9.54□□□□□ -0.88
SHMT2-213ENST00000554600 KLHL4Q9C0H6 718 aa9.54□□□□□ -0.88
SHMT2-213ENST00000554600 CLEC4MQ9H2X3 399 aaPredicted RBP9.54□□□□□ -0.88
SHMT2-213ENST00000554600 RABEP2Q9H5N1 569 aa9.54□□□□□ -0.88
SHMT2-213ENST00000554600 COQ10BQ9H8M1 238 aa9.54□□□□□ -0.88
SHMT2-213ENST00000554600 CTPS2Q9NRF8 586 aa9.54□□□□□ -0.88
SHMT2-213ENST00000554600 ACER3Q9NUN7 267 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms