RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, human

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R3A-204	ENST00000554574	KRT75	O95678	551 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	C6orf47	O95873	294 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	SERPINA1	P01009	418 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	C1QC	P02747	245 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	MT-ND1	P03886	318 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	LCK	P06239	509 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	LYN	P07948	512 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	FAM58BP	P0C7Q3	252 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	UGT2B7	P16662	529 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	EFNA1	P20827	205 aa	Predicted RBP	4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	HIST1H1T	P22492	207 aa	Predicted RBP	4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	UQCRC2	P22695	453 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	CD27	P26842	260 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	KDELR2	P33947	212 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	PCGF2	P35227	344 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	PLA2G16	P53816	162 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	STXBP1	P61764	594 aa	Known RBP	4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	TGM3	Q08188	693 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	RBBP4	Q09028	425 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	PDK3	Q15120	406 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	SLC5A12	Q1EHB4	618 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	ALG10	Q5BKT4	473 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	NHSL2	Q5HYW2	709 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	ALG10B	Q5I7T1	473 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	TRIM40	Q6P9F5	258 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	ZNF793	Q6ZN11	406 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	IGFN1	Q86VF2	1251 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	NAGS	Q8N159	534 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	ZCCHC7	Q8N3Z6	543 aa	Known RBP	4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	SPEM1	Q8N4L4	309 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	PSMA8	Q8TAA3	256 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	FBXO30	Q8TB52	745 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	NT5C	Q8TCD5	201 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	PNPT1	Q8TCS8	783 aa	Known RBP	4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	RLN3	Q8WXF3	142 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	OR5P2	Q8WZ92	322 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	CLDN23	Q96B33	292 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	ZBED6CL	Q96FA7	236 aa	Predicted RBP	4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	PYURF	Q96I23	114 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	SLC35A5	Q9BS91	424 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	FAIM2	Q9BWQ8	316 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	ANKRD60	Q9BZ19	345 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	TRIM4	Q9C037	500 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	TCEAL2	Q9H3H9	227 aa	Predicted RBP	4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	TMEM38A	Q9H6F2	299 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	NTN4	Q9HB63	628 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	TEX10	Q9NXF1	929 aa	Predicted RBP	4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	DNAJB9	Q9UBS3	223 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574		V9GYQ6	96 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	ASCC3	Q8N3C0	2202 aa	Known RBP	4.35	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	WDR87	Q6ZQQ6	2873 aa		4.35	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	OR6C74	A6NCV1	312 aa		4.35	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	C2orf74	A8MZ97	194 aa		4.35	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	C4orf51	C9J302	202 aa		4.35	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	PDLIM1	O00151	329 aa		4.35	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	EI24	O14681	340 aa		4.35	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	CST1	P01037	141 aa		4.35	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	CSF2	P04141	144 aa		4.35	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	SEMG1	P04279	462 aa		4.35	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	SERPIND1	P05546	499 aa		4.35	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	SLC35G6	P0C7Q6	338 aa		4.35	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	CTSE	P14091	401 aa		4.35	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	ZNF23	P17027	643 aa		4.35	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	MAG	P20916	626 aa		4.35	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	ATP5A1	P25705	553 aa	Known RBP	4.35	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	CD38	P28907	300 aa		4.35	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	CHI3L1	P36222	383 aa	Predicted RBP	4.35	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	CRAT	P43155	626 aa		4.35	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	MAGEA8	P43361	318 aa		4.35	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	RPS9	P46781	194 aa	Known RBP	4.35	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	RGS1	Q08116	209 aa		4.35	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	C16orf72	Q14CZ0	275 aa		4.35	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	ZNF630	Q2M218	657 aa	Predicted RBP	4.35	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	LRRC23	Q53EV4	343 aa	Predicted RBP	4.35	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	TOR1AIP1	Q5JTV8	583 aa		4.35	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	4.35	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	C6orf52	Q5T4I8	152 aa		4.35	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	NDUFAF5	Q5TEU4	345 aa		4.35	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	PMS2CL	Q68D20	193 aa		4.35	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	SPESP1	Q6UW49	350 aa		4.35	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	UGT2A3	Q6UWM9	527 aa		4.35	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	EIF3M	Q7L2H7	374 aa	Known RBP	4.35	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	VN1R4	Q7Z5H5	301 aa		4.35	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	TAF8	Q7Z7C8	310 aa		4.35	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	CARM1	Q86X55	608 aa		4.35	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	SLC30A8	Q8IWU4	369 aa		4.35	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	CHERP	Q8IWX8	916 aa	Known RBP	4.35	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	SLC35F3	Q8IY50	421 aa		4.35	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	MMP21	Q8N119	569 aa		4.35	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	SVOPL	Q8N434	492 aa		4.35	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	ACOT4	Q8N9L9	421 aa		4.35	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	AVL9	Q8NBF6	648 aa		4.35	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	SLC37A2	Q8TED4	501 aa		4.35	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	PATE1	Q8WXA2	126 aa		4.35	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	TMBIM1	Q969X1	311 aa		4.35	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	TM4SF19	Q96DZ7	209 aa		4.35	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	NEURL3	Q96EH8	262 aa		4.35	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	RDH12	Q96NR8	316 aa		4.35	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms