RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 MSX1P28360 303 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 SHC1P29353 583 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 RRM2P31350 389 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 GSSP48637 474 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 DAPP51397 102 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 TDGF1P3P51864 188 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 RPS4XP62701 263 aaKnown RBP6.11□□□□□ -1.43
LINC00517-202ENST00000554257 GANABQ14697 944 aaKnown RBP6.11□□□□□ -1.43
LINC00517-202ENST00000554257 KDM4DQ6B0I6 523 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 LINC00696Q6ZRV3 163 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 FKBP9P1Q75LS8 142 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 TRILQ7L0X0 811 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 PLCZ1Q86YW0 608 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 LRRC75AQ8NAA5 344 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 TMEM255BQ8WV15 326 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 SLC41A3Q96GZ6 507 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 ZNF347Q96SE7 839 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 MBOAT4Q96T53 435 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 C20orf141Q9NUB4 165 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 SH3GLB1Q9Y371 365 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 MED12LQ86YW9 2145 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 A6NL46 340 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 NDUFB5O43674 189 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 IFNW1P05000 195 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 ALPLP05186 524 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 UBTFL6P0CB48 400 aaPredicted RBP6.11□□□□□ -1.43
LINC00517-202ENST00000554257 SLC1A3P43003 542 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 SLC6A8P48029 635 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 HPCAP84074 193 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 EFNB1P98172 346 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 PRKCDQ05655 676 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 CBFBQ13951 182 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 QPRTQ15274 297 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 EXOC3L2Q2M3D2 409 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 DCST1Q5T197 706 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 WBP2NLQ6ICG8 309 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 C1orf94Q6P1W5 598 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 PGBD2Q6P3X8 592 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 PODNL1Q6PEZ8 512 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 ZNF550Q7Z398 422 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 CYP4Z1Q86W10 505 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 KIF18BQ86Y91 864 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 PIAS4Q8N2W9 510 aaPredicted RBP6.11□□□□□ -1.43
LINC00517-202ENST00000554257 VANGL1Q8TAA9 524 aaPredicted RBP6.11□□□□□ -1.43
LINC00517-202ENST00000554257 ST8SIA1Q92185 356 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 NR4A3Q92570 626 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 EXTL1Q92935 676 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 ABHD17AQ96GS6 310 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 CENPNQ96H22 339 aaPredicted RBP6.11□□□□□ -1.43
LINC00517-202ENST00000554257 MCHR1Q99705 422 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 FAM173AQ9BQD7 235 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 UTP23Q9BRU9 249 aaKnown RBP6.11□□□□□ -1.43
LINC00517-202ENST00000554257 TMEM43Q9BTV4 400 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 OSBPL10Q9BXB5 764 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 DGCR6LQ9BY27 220 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 ADNPQ9H2P0 1102 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 RHCGQ9UBD6 479 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 OSGIN1Q9UJX0 560 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 SLC7A7Q9UM01 511 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 TP53TG5Q9Y2B4 290 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 LIPGQ9Y5X9 500 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 IGSF10Q6WRI0 2623 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 CPSF4LA6NMK7 179 aaKnown RBP6.11□□□□□ -1.43
LINC00517-202ENST00000554257 CDC42EP2O14613 210 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 RRP8O43159 456 aaKnown RBP6.11□□□□□ -1.43
LINC00517-202ENST00000554257 PEX1O43933 1283 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 CYP7B1O75881 506 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 RASAL1O95294 804 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 BGLAPP02818 100 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 PEX2P28328 305 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 RBM34P42696 430 aaKnown RBP6.11□□□□□ -1.43
LINC00517-202ENST00000554257 FOXK2Q01167 660 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 FOXF1Q12946 379 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 MICAQ29983 383 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 ABHD17BQ5VST6 288 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 SLC25A25Q6KCM7 469 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 AMIGO2Q86SJ2 522 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 ADGRE4PQ86SQ3 457 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 GTPBP8Q8N3Z3 284 aaPredicted RBP6.11□□□□□ -1.43
LINC00517-202ENST00000554257 FAM83FQ8NEG4 500 aaPredicted RBP6.11□□□□□ -1.43
LINC00517-202ENST00000554257 PFN4Q8NHR9 129 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 PHOSPHO1Q8TCT1 267 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 LRGUKQ96M69 825 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 GNRHR2Q96P88 292 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 DSN1Q9H410 356 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 IGF2RP11717 2491 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 A0A087WZY1 265 aa6.1□□□□□ -1.43
LINC00517-202ENST00000554257 ZC3H12DA2A288 527 aaKnown RBP6.1□□□□□ -1.43
LINC00517-202ENST00000554257 TRAPPC13A5PLN9 417 aa6.1□□□□□ -1.43
LINC00517-202ENST00000554257 TMEM247A6NEH6 219 aa6.1□□□□□ -1.43
LINC00517-202ENST00000554257 SHISA8B8ZZ34 492 aa6.1□□□□□ -1.43
LINC00517-202ENST00000554257 G3V3Y1 287 aa6.1□□□□□ -1.43
LINC00517-202ENST00000554257 TP53I11O14683 189 aa6.1□□□□□ -1.43
LINC00517-202ENST00000554257 CDC40O60508 579 aaKnown RBP eCLIP6.1□□□□□ -1.43
LINC00517-202ENST00000554257 PTP4A3O75365 173 aa6.1□□□□□ -1.43
LINC00517-202ENST00000554257 ADH6P28332 368 aa6.1□□□□□ -1.43
LINC00517-202ENST00000554257 YAP1P46937 504 aaKnown RBP6.1□□□□□ -1.43
LINC00517-202ENST00000554257 MEOX1P50221 254 aa6.1□□□□□ -1.43
LINC00517-202ENST00000554257 DSCR4P56555 118 aaPredicted RBP6.1□□□□□ -1.43
LINC00517-202ENST00000554257 SESN3P58005 492 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms