RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 1 (best) BASIC

Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 BTN3A2P78410 334 aa16.25■□□□□ 0.19
SYNE3-202ENST00000553340 OR1Q1Q15612 314 aa16.25■□□□□ 0.19
SYNE3-202ENST00000553340 GARNL3Q5VVW2 1013 aa16.25■□□□□ 0.19
SYNE3-202ENST00000553340 FCRLBQ6BAA4 426 aa16.25■□□□□ 0.19
SYNE3-202ENST00000553340 MTSS1LQ765P7 747 aa16.25■□□□□ 0.19
SYNE3-202ENST00000553340 PRSS45Q7RTY3 260 aa16.25■□□□□ 0.19
SYNE3-202ENST00000553340 BMP8AQ7Z5Y6 402 aa16.25■□□□□ 0.19
SYNE3-202ENST00000553340 SLITRK4Q8IW52 837 aa16.25■□□□□ 0.19
SYNE3-202ENST00000553340 LRRC25Q8N386 305 aaPredicted RBP16.25■□□□□ 0.19
SYNE3-202ENST00000553340 OR2L3Q8NG85 312 aa16.25■□□□□ 0.19
SYNE3-202ENST00000553340 OR13C2Q8NGS9 318 aa16.25■□□□□ 0.19
SYNE3-202ENST00000553340 THAP4Q8WY91 577 aa16.25■□□□□ 0.19
SYNE3-202ENST00000553340 ING5Q8WYH8 240 aa16.25■□□□□ 0.19
SYNE3-202ENST00000553340 BPIFA2Q96DR5 249 aa16.25■□□□□ 0.19
SYNE3-202ENST00000553340 SMAD5Q99717 465 aaKnown RBP16.25■□□□□ 0.19
SYNE3-202ENST00000553340 C1QTNF7Q9BXJ2 289 aa16.25■□□□□ 0.19
SYNE3-202ENST00000553340 METTL17Q9H7H0 456 aaPredicted RBP16.25■□□□□ 0.19
SYNE3-202ENST00000553340 NKIRAS2Q9NYR9 191 aa16.25■□□□□ 0.19
SYNE3-202ENST00000553340 PCDH10Q9P2E7 1040 aa16.25■□□□□ 0.19
SYNE3-202ENST00000553340 FKBP7Q9Y680 259 aa16.25■□□□□ 0.19
SYNE3-202ENST00000553340 M0R233 179 aa16.25■□□□□ 0.19
SYNE3-202ENST00000553340 TOXO94900 526 aa16.25■□□□□ 0.19
SYNE3-202ENST00000553340 HPXP02790 462 aa16.25■□□□□ 0.19
SYNE3-202ENST00000553340 GKN3PP0CG01 181 aa16.25■□□□□ 0.19
SYNE3-202ENST00000553340 ZNF3P17036 446 aa16.25■□□□□ 0.19
SYNE3-202ENST00000553340 SDHBP21912 280 aa16.25■□□□□ 0.19
SYNE3-202ENST00000553340 GDNFP39905 211 aa16.25■□□□□ 0.19
SYNE3-202ENST00000553340 CRYZQ08257 329 aaKnown RBP16.25■□□□□ 0.19
SYNE3-202ENST00000553340 TJAP1Q5JTD0 557 aa16.25■□□□□ 0.19
SYNE3-202ENST00000553340 TMEM65Q6PI78 240 aa16.25■□□□□ 0.19
SYNE3-202ENST00000553340 SYT9Q86SS6 491 aa16.25■□□□□ 0.19
SYNE3-202ENST00000553340 FTMTQ8N4E7 242 aa16.25■□□□□ 0.19
SYNE3-202ENST00000553340 SLC2A12Q8TD20 617 aa16.25■□□□□ 0.19
SYNE3-202ENST00000553340 RAB7BQ96AH8 199 aa16.25■□□□□ 0.19
SYNE3-202ENST00000553340 LRRC3BQ96PB8 259 aa16.25■□□□□ 0.19
SYNE3-202ENST00000553340 SDF2Q99470 211 aa16.25■□□□□ 0.19
SYNE3-202ENST00000553340 GSX2Q9BZM3 304 aa16.25■□□□□ 0.19
SYNE3-202ENST00000553340 ZCCHC4Q9H5U6 513 aa16.25■□□□□ 0.19
SYNE3-202ENST00000553340 HAO2Q9NYQ3 351 aa16.25■□□□□ 0.19
SYNE3-202ENST00000553340 NTMQ9P121 344 aa16.25■□□□□ 0.19
SYNE3-202ENST00000553340 SIGLEC7Q9Y286 467 aa16.25■□□□□ 0.19
SYNE3-202ENST00000553340 C1QTNF3-AMACRE9PGA6 284 aa16.24■□□□□ 0.19
SYNE3-202ENST00000553340 LATO43561 262 aa16.24■□□□□ 0.19
SYNE3-202ENST00000553340 SLC2A5P22732 501 aa16.24■□□□□ 0.19
SYNE3-202ENST00000553340 POU6F2P78424 691 aaPredicted RBP16.24■□□□□ 0.19
SYNE3-202ENST00000553340 CRMP1Q14194 572 aa16.24■□□□□ 0.19
SYNE3-202ENST00000553340 DUSP5Q16690 384 aa16.24■□□□□ 0.19
SYNE3-202ENST00000553340 FAAH2Q6GMR7 532 aa16.24■□□□□ 0.19
SYNE3-202ENST00000553340 MTFR2Q6P444 385 aa16.24■□□□□ 0.19
SYNE3-202ENST00000553340 TMPRSS11FQ6ZWK6 438 aa16.24■□□□□ 0.19
SYNE3-202ENST00000553340 CYB561A3Q8NBI2 242 aa16.24■□□□□ 0.19
SYNE3-202ENST00000553340 ZNF671Q8TAW3 534 aa16.24■□□□□ 0.19
SYNE3-202ENST00000553340 ST6GALNAC2Q9UJ37 374 aa16.24■□□□□ 0.19
SYNE3-202ENST00000553340 TBC1D3EA0A087X179 549 aa16.24■□□□□ 0.19
SYNE3-202ENST00000553340 CFDP00746 253 aaPredicted RBP16.24■□□□□ 0.19
SYNE3-202ENST00000553340 LAMP2P13473 410 aa16.24■□□□□ 0.19
SYNE3-202ENST00000553340 NT5EP21589 574 aa16.24■□□□□ 0.19
SYNE3-202ENST00000553340 SELENOPP49908 381 aa16.24■□□□□ 0.19
SYNE3-202ENST00000553340 POU4F2Q12837 409 aa16.24■□□□□ 0.19
SYNE3-202ENST00000553340 ZNF234Q14588 700 aa16.24■□□□□ 0.19
SYNE3-202ENST00000553340 FAM69AQ5T7M9 428 aa16.24■□□□□ 0.19
SYNE3-202ENST00000553340 NLRC3Q7RTR2 1065 aa16.24■□□□□ 0.19
SYNE3-202ENST00000553340 ZNF527Q8NB42 609 aa16.24■□□□□ 0.19
SYNE3-202ENST00000553340 MFSD9Q8NBP5 474 aa16.24■□□□□ 0.19
SYNE3-202ENST00000553340 FAM98AQ8NCA5 519 aaKnown RBP16.24■□□□□ 0.19
SYNE3-202ENST00000553340 C7orf57Q8NEG2 295 aa16.24■□□□□ 0.19
SYNE3-202ENST00000553340 OR52E1Q8NGJ3 308 aa16.24■□□□□ 0.19
SYNE3-202ENST00000553340 SARGQ9BW04 601 aa16.24■□□□□ 0.19
SYNE3-202ENST00000553340 HDAC8Q9BY41 377 aa16.24■□□□□ 0.19
SYNE3-202ENST00000553340 RBCK1Q9BYM8 510 aa16.24■□□□□ 0.19
SYNE3-202ENST00000553340 AUNIPQ9H7T9 357 aa16.24■□□□□ 0.19
SYNE3-202ENST00000553340 RPS6KB2Q9UBS0 482 aa16.24■□□□□ 0.19
SYNE3-202ENST00000553340 MED31Q9Y3C7 131 aa16.24■□□□□ 0.19
SYNE3-202ENST00000553340 OR1A2Q9Y585 309 aa16.24■□□□□ 0.19
SYNE3-202ENST00000553340 HIDE1A8MVS5 230 aa16.23■□□□□ 0.19
SYNE3-202ENST00000553340 PRAF2O60831 178 aa16.23■□□□□ 0.19
SYNE3-202ENST00000553340 RNGTTO60942 597 aaKnown RBP16.23■□□□□ 0.19
SYNE3-202ENST00000553340 NDUFS1P28331 727 aa16.23■□□□□ 0.19
SYNE3-202ENST00000553340 SOX9P48436 509 aa16.23■□□□□ 0.19
SYNE3-202ENST00000553340 BLVRAP53004 296 aa16.23■□□□□ 0.19
SYNE3-202ENST00000553340 EPHA4P54764 986 aa16.23■□□□□ 0.19
SYNE3-202ENST00000553340 SSX6Q7RTT6 188 aa16.23■□□□□ 0.19
SYNE3-202ENST00000553340 ADGRG3Q86Y34 549 aa16.23■□□□□ 0.19
SYNE3-202ENST00000553340 WDR26Q9H7D7 661 aa16.23■□□□□ 0.19
SYNE3-202ENST00000553340 SYNPO2LQ9H987 977 aa16.23■□□□□ 0.19
SYNE3-202ENST00000553340 COQ3Q9NZJ6 369 aa16.23■□□□□ 0.19
SYNE3-202ENST00000553340 AKAP7Q9P0M2 348 aaPredicted RBP16.23■□□□□ 0.19
SYNE3-202ENST00000553340 FBXL4Q9UKA2 621 aa16.23■□□□□ 0.19
SYNE3-202ENST00000553340 KCNK6Q9Y257 313 aa16.23■□□□□ 0.19
SYNE3-202ENST00000553340 GPR89AB7ZAQ6 455 aa16.23■□□□□ 0.19
SYNE3-202ENST00000553340 KHNYNO15037 678 aaKnown RBP16.23■□□□□ 0.19
SYNE3-202ENST00000553340 PRICKLE3O43900 615 aaPredicted RBP16.23■□□□□ 0.19
SYNE3-202ENST00000553340 ITGA10O75578 1167 aa16.23■□□□□ 0.19
SYNE3-202ENST00000553340 TGM6O95932 706 aa16.23■□□□□ 0.19
SYNE3-202ENST00000553340 DBIP07108 87 aaKnown RBP16.23■□□□□ 0.19
SYNE3-202ENST00000553340 GPR89BP0CG08 455 aa16.23■□□□□ 0.19
SYNE3-202ENST00000553340 GDI2P50395 445 aaKnown RBP16.23■□□□□ 0.19
SYNE3-202ENST00000553340 RPL6Q02878 288 aaKnown RBP16.23■□□□□ 0.19
SYNE3-202ENST00000553340 UBE2NLQ5JXB2 153 aa16.23■□□□□ 0.19
SYNE3-202ENST00000553340 MRPL2Q5T653 305 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms