RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 FAM92AA1XBS5 289 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 RAB19A4D1S5 217 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 DUXAA6NLW8 204 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 C15orf62A8K5M9 175 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 F8W036 122 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 K7ERQ8 282 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 WRBO00258 174 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 PGRMC1O00264 195 aaKnown RBP4.35□□□□□ -1.71
ATXN3-218ENST00000553309 CCRL2O00421 344 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 FPGTO14772 594 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 INPP4BO15327 924 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 BUB1O43683 1085 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 DPM1O60762 260 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 TBL1XO60907 577 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 NOL3O60936 208 aaKnown RBP4.35□□□□□ -1.71
ATXN3-218ENST00000553309 PEX11AO75192 247 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 TRMUO75648 421 aaKnown RBP4.35□□□□□ -1.71
ATXN3-218ENST00000553309 BEST1O76090 585 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 STK17BO94768 372 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 MYO1DO94832 1006 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 PTBP3O95758 552 aaKnown RBP4.35□□□□□ -1.71
ATXN3-218ENST00000553309 PATE4P0C8F1 98 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 DBTP11182 482 aaKnown RBP4.35□□□□□ -1.71
ATXN3-218ENST00000553309 PRPS2P11908 318 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 PRG2P13727 222 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 MSH3P20585 1137 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 CHMP24386 653 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 GJB2P29033 226 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 ALDH4A1P30038 563 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 CHRNB4P30926 498 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 RCVRNP35243 200 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 SERPINB5P36952 375 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 CCT3P49368 545 aaKnown RBP4.35□□□□□ -1.71
ATXN3-218ENST00000553309 VEGFCP49767 419 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 NKX2-5P52952 324 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-218ENST00000553309 SPCS3P61009 180 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 NCALDP61601 193 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 PMS2P3Q13401 168 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 ELAVL3Q14576 367 aaKnown RBP4.35□□□□□ -1.71
ATXN3-218ENST00000553309 POU6F1Q14863 301 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 MORF4L2Q15014 288 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 LTB4RQ15722 352 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 CEBPEQ15744 281 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 KCTD21Q4G0X4 260 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 MPPE1Q53F39 396 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 TNFAIP8L3Q5GJ75 292 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 DCAF12Q5T6F0 453 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 ATAD3BQ5T9A4 648 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 PIP5KL1Q5T9C9 394 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 RESP18Q5W5W9 173 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 C3orf33Q6P1S2 294 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 EMBQ6PCB8 327 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 RFWD3Q6PCD5 774 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 ASRGL1Q7L266 308 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 TAS2R42Q7RTR8 314 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 TRPT1Q86TN4 253 aaKnown RBP4.35□□□□□ -1.71
ATXN3-218ENST00000553309 SETD3Q86TU7 594 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-218ENST00000553309 BIVMQ86UB2 503 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 RCOR2Q8IZ40 523 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 CENPSQ8N2Z9 138 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 C10orf53Q8N6V4 93 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 ICA1LQ8NDH6 482 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 VANGL1Q8TAA9 524 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-218ENST00000553309 AENQ8WTP8 325 aaKnown RBP4.35□□□□□ -1.71
ATXN3-218ENST00000553309 FAM131CQ96AQ9 280 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 PTERQ96BW5 349 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 SLC25A36Q96CQ1 311 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 PDXPQ96GD0 296 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 HPDLQ96IR7 371 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 C7orf26Q96N11 449 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 ZNF641Q96N77 438 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-218ENST00000553309 SERPINB12Q96P63 405 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 FAM111AQ96PZ2 611 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 TXN2Q99757 166 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 TDRD1Q9BXT4 1180 aaKnown RBP4.35□□□□□ -1.71
ATXN3-218ENST00000553309 OR2B2Q9GZK3 357 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 DDX47Q9H0S4 455 aaKnown RBP4.35□□□□□ -1.71
ATXN3-218ENST00000553309 OSGEPL1Q9H4B0 414 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 SIAEQ9HAT2 523 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 APMAPQ9HDC9 416 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 MRPS30Q9NP92 439 aaKnown RBP4.35□□□□□ -1.71
ATXN3-218ENST00000553309 TIGARQ9NQ88 270 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 SERINC1Q9NRX5 453 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 OLA1Q9NTK5 396 aaKnown RBP4.35□□□□□ -1.71
ATXN3-218ENST00000553309 IL19Q9UHD0 177 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 B3GALT5Q9Y2C3 310 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 PPP2R2CQ9Y2T4 447 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 SAMHD1Q9Y3Z3 626 aaKnown RBP4.35□□□□□ -1.71
ATXN3-218ENST00000553309 MAD1L1Q9Y6D9 718 aa4.35□□□□□ -1.71
ATXN3-218ENST00000553309 MYO7BQ6PIF6 2116 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 AKAP6Q13023 2319 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 RGSL1A5PLK6 1076 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 KRT87PA6NCN2 255 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 LIPT2A6NK58 231 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 A6NL46 340 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 A8MXQ7 604 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 K7EPI3 171 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 TXNDC9O14530 226 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 SMAD9O15198 467 aaKnown RBP4.34□□□□□ -1.71
ATXN3-218ENST00000553309 SMPD2O60906 423 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms