RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 OR10A4Q9H209 315 aa3.55□□□□□ -1.84
ATXN3-217ENST00000553287 UBQLN3Q9H347 655 aa3.55□□□□□ -1.84
ATXN3-217ENST00000553287 C5orf66Q9H5L9 145 aa3.55□□□□□ -1.84
ATXN3-217ENST00000553287 FNDC4Q9H6D8 234 aaPredicted RBP3.55□□□□□ -1.84
ATXN3-217ENST00000553287 AKIRIN1Q9H9L7 192 aaPredicted RBP3.55□□□□□ -1.84
ATXN3-217ENST00000553287 MOSPD1Q9UJG1 213 aa3.55□□□□□ -1.84
ATXN3-217ENST00000553287 VSIG4Q9Y279 399 aa3.55□□□□□ -1.84
ATXN3-217ENST00000553287 HIVEP3Q5T1R4 2406 aa3.55□□□□□ -1.84
ATXN3-217ENST00000553287 ESPL1Q14674 2120 aa3.55□□□□□ -1.84
ATXN3-217ENST00000553287 ZNF469Q96JG9 3925 aaPredicted RBP3.54□□□□□ -1.84
ATXN3-217ENST00000553287 IGHV3-16A0A0C4DH30 117 aa3.54□□□□□ -1.84
ATXN3-217ENST00000553287 A8MX80 341 aa3.54□□□□□ -1.84
ATXN3-217ENST00000553287 F5H5T6 163 aa3.54□□□□□ -1.84
ATXN3-217ENST00000553287 TMX2-CTNND1H3BSU7 103 aa3.54□□□□□ -1.84
ATXN3-217ENST00000553287 M0QYV0 167 aa3.54□□□□□ -1.84
ATXN3-217ENST00000553287 STK17BO94768 372 aa3.54□□□□□ -1.84
ATXN3-217ENST00000553287 UGT2B4P06133 528 aa3.54□□□□□ -1.84
ATXN3-217ENST00000553287 ANKRD34CP0C6C1 535 aa3.54□□□□□ -1.84
ATXN3-217ENST00000553287 LBPP18428 481 aa3.54□□□□□ -1.84
ATXN3-217ENST00000553287 PTAFRP25105 342 aa3.54□□□□□ -1.84
ATXN3-217ENST00000553287 DLSTP36957 453 aa3.54□□□□□ -1.84
ATXN3-217ENST00000553287 CCNHP51946 323 aaPredicted RBP3.54□□□□□ -1.84
ATXN3-217ENST00000553287 SRP54P61011 504 aaKnown RBP3.54□□□□□ -1.84
ATXN3-217ENST00000553287 BST2Q10589 180 aaKnown RBP3.54□□□□□ -1.84
ATXN3-217ENST00000553287 PPA1Q15181 289 aa3.54□□□□□ -1.84
ATXN3-217ENST00000553287 TMEM44Q2T9K0 475 aa3.54□□□□□ -1.84
ATXN3-217ENST00000553287 WSCD2Q2TBF2 565 aa3.54□□□□□ -1.84
ATXN3-217ENST00000553287 C14orf28Q4W4Y0 310 aa3.54□□□□□ -1.84
ATXN3-217ENST00000553287 DCAF12Q5T6F0 453 aa3.54□□□□□ -1.84
ATXN3-217ENST00000553287 RNLSQ5VYX0 342 aa3.54□□□□□ -1.84
ATXN3-217ENST00000553287 SPECC1LQ69YQ0 1117 aa3.54□□□□□ -1.84
ATXN3-217ENST00000553287 C22orf39Q6P5X5 142 aa3.54□□□□□ -1.84
ATXN3-217ENST00000553287 FAM199XQ6PEV8 388 aaPredicted RBP3.54□□□□□ -1.84
ATXN3-217ENST00000553287 BAIAP2L2Q6UXY1 529 aa3.54□□□□□ -1.84
ATXN3-217ENST00000553287 SPATA21Q7Z572 469 aa3.54□□□□□ -1.84
ATXN3-217ENST00000553287 KIAA0895Q8NCT3 520 aa3.54□□□□□ -1.84
ATXN3-217ENST00000553287 OCC1Q8TAD7 63 aa3.54□□□□□ -1.84
ATXN3-217ENST00000553287 CATSPER2Q96P56 530 aa3.54□□□□□ -1.84
ATXN3-217ENST00000553287 TSSK2Q96PF2 358 aa3.54□□□□□ -1.84
ATXN3-217ENST00000553287 MARCH7Q9H992 704 aa3.54□□□□□ -1.84
ATXN3-217ENST00000553287 ACP6Q9NPH0 428 aa3.54□□□□□ -1.84
ATXN3-217ENST00000553287 MRGBPQ9NV56 204 aa3.54□□□□□ -1.84
ATXN3-217ENST00000553287 ASF1BQ9NVP2 202 aa3.54□□□□□ -1.84
ATXN3-217ENST00000553287 DMAC2Q9NW81 257 aa3.54□□□□□ -1.84
ATXN3-217ENST00000553287 APPL1Q9UKG1 709 aa3.54□□□□□ -1.84
ATXN3-217ENST00000553287 NTNG1Q9Y2I2 539 aa3.54□□□□□ -1.84
ATXN3-217ENST00000553287 VPS13CQ709C8 3753 aa3.54□□□□□ -1.84
ATXN3-217ENST00000553287 A0A0U1RQS6 177 aa3.53□□□□□ -1.84
ATXN3-217ENST00000553287 A0A1B0GTH9 108 aa3.53□□□□□ -1.84
ATXN3-217ENST00000553287 ARGFXA6NJG6 315 aa3.53□□□□□ -1.84
ATXN3-217ENST00000553287 ZNF732B4DXR9 585 aa3.53□□□□□ -1.84
ATXN3-217ENST00000553287 ALOX15BO15296 676 aa3.53□□□□□ -1.84
ATXN3-217ENST00000553287 LRRTM2O43300 516 aa3.53□□□□□ -1.84
ATXN3-217ENST00000553287 FCGR3BO75015 233 aa3.53□□□□□ -1.84
ATXN3-217ENST00000553287 CPNE6O95741 557 aa3.53□□□□□ -1.84
ATXN3-217ENST00000553287 CD160O95971 181 aa3.53□□□□□ -1.84
ATXN3-217ENST00000553287 TNFP01375 233 aa3.53□□□□□ -1.84
ATXN3-217ENST00000553287 APOEP02649 317 aa3.53□□□□□ -1.84
ATXN3-217ENST00000553287 THY1P04216 161 aa3.53□□□□□ -1.84
ATXN3-217ENST00000553287 RPN1P04843 607 aaKnown RBP3.53□□□□□ -1.84
ATXN3-217ENST00000553287 FGF1P05230 155 aa3.53□□□□□ -1.84
ATXN3-217ENST00000553287 RHOCP08134 193 aa3.53□□□□□ -1.84
ATXN3-217ENST00000553287 ALPIP09923 528 aa3.53□□□□□ -1.84
ATXN3-217ENST00000553287 DUX4L4P0CJ87 422 aa3.53□□□□□ -1.84
ATXN3-217ENST00000553287 KLK2P20151 261 aa3.53□□□□□ -1.84
ATXN3-217ENST00000553287 CD82P27701 267 aa3.53□□□□□ -1.84
ATXN3-217ENST00000553287 ELK3P41970 407 aa3.53□□□□□ -1.84
ATXN3-217ENST00000553287 PLK1P53350 603 aa3.53□□□□□ -1.84
ATXN3-217ENST00000553287 NAGLUP54802 743 aa3.53□□□□□ -1.84
ATXN3-217ENST00000553287 ARF5P84085 180 aa3.53□□□□□ -1.84
ATXN3-217ENST00000553287 NME3Q13232 169 aa3.53□□□□□ -1.84
ATXN3-217ENST00000553287 ELOCQ15369 112 aa3.53□□□□□ -1.84
ATXN3-217ENST00000553287 MAPK11Q15759 364 aa3.53□□□□□ -1.84
ATXN3-217ENST00000553287 CARD16Q5EG05 197 aa3.53□□□□□ -1.84
ATXN3-217ENST00000553287 SLC27A4Q6P1M0 643 aa3.53□□□□□ -1.84
ATXN3-217ENST00000553287 CCDC73Q6ZRK6 1079 aa3.53□□□□□ -1.84
ATXN3-217ENST00000553287 RFPL4BQ6ZWI9 263 aa3.53□□□□□ -1.84
ATXN3-217ENST00000553287 GKN2Q86XP6 184 aa3.53□□□□□ -1.84
ATXN3-217ENST00000553287 HIPK1Q86Z02 1210 aa3.53□□□□□ -1.84
ATXN3-217ENST00000553287 TAF4BQ92750 862 aa3.53□□□□□ -1.84
ATXN3-217ENST00000553287 ST6GALNAC6Q969X2 333 aa3.53□□□□□ -1.84
ATXN3-217ENST00000553287 KIAA1143Q96AT1 154 aaPredicted RBP3.53□□□□□ -1.84
ATXN3-217ENST00000553287 SNRNP40Q96DI7 357 aaKnown RBP3.53□□□□□ -1.84
ATXN3-217ENST00000553287 BTN2A3PQ96KV6 586 aa3.53□□□□□ -1.84
ATXN3-217ENST00000553287 SERPINB11Q96P15 392 aa3.53□□□□□ -1.84
ATXN3-217ENST00000553287 TNFRSF13CQ96RJ3 184 aa3.53□□□□□ -1.84
ATXN3-217ENST00000553287 DDX50Q9BQ39 737 aaKnown RBP3.53□□□□□ -1.84
ATXN3-217ENST00000553287 MGME1Q9BQP7 344 aa3.53□□□□□ -1.84
ATXN3-217ENST00000553287 APOOQ9BUR5 198 aa3.53□□□□□ -1.84
ATXN3-217ENST00000553287 CYP3A43Q9HB55 503 aa3.53□□□□□ -1.84
ATXN3-217ENST00000553287 PFDN4Q9NQP4 134 aa3.53□□□□□ -1.84
ATXN3-217ENST00000553287 DEPPQ9NTK1 212 aa3.53□□□□□ -1.84
ATXN3-217ENST00000553287 THYN1Q9P016 225 aa3.53□□□□□ -1.84
ATXN3-217ENST00000553287 AKAP7Q9P0M2 348 aaPredicted RBP3.53□□□□□ -1.84
ATXN3-217ENST00000553287 HS3ST2Q9Y278 367 aa3.53□□□□□ -1.84
ATXN3-217ENST00000553287 RP1L1Q8IWN7 2480 aaPredicted RBP3.53□□□□□ -1.84
ATXN3-217ENST00000553287 CCDC168Q8NDH2 2452 aa3.53□□□□□ -1.84
ATXN3-217ENST00000553287 MN1Q10571 1320 aaPredicted RBP3.52□□□□□ -1.85
ATXN3-217ENST00000553287 IGHV1OR21-1A0A087WYE8 117 aa3.52□□□□□ -1.85
ATXN3-217ENST00000553287 ZSCAN5CA6NGD5 496 aaPredicted RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms