RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 ZNF117Q03924 483 aa11.49□□□□□ -0.57
SNRPF-203ENST00000551316 MAD2L1BPQ15013 274 aaPredicted RBP11.49□□□□□ -0.57
SNRPF-203ENST00000551316 SPA17Q15506 151 aa11.49□□□□□ -0.57
SNRPF-203ENST00000551316 NDUFAF6Q330K2 333 aa11.49□□□□□ -0.57
SNRPF-203ENST00000551316 OXLD1Q5BKU9 147 aa11.49□□□□□ -0.57
SNRPF-203ENST00000551316 HP1BP3Q5SSJ5 553 aaPredicted RBP11.49□□□□□ -0.57
SNRPF-203ENST00000551316 CBLN3Q6UW01 205 aa11.49□□□□□ -0.57
SNRPF-203ENST00000551316 WDFY1Q8IWB7 410 aa11.49□□□□□ -0.57
SNRPF-203ENST00000551316 C17orf78Q8N4C9 275 aa11.49□□□□□ -0.57
SNRPF-203ENST00000551316 OR4F5Q8NH21 305 aa11.49□□□□□ -0.57
SNRPF-203ENST00000551316 EXOSC8Q96B26 276 aaKnown RBP11.49□□□□□ -0.57
SNRPF-203ENST00000551316 ZNF442Q9H7R0 627 aa11.49□□□□□ -0.57
SNRPF-203ENST00000551316 PPANQ9NQ55 473 aaKnown RBP11.49□□□□□ -0.57
SNRPF-203ENST00000551316 PLEK2Q9NYT0 353 aa11.49□□□□□ -0.57
SNRPF-203ENST00000551316 MYEF2Q9P2K5 600 aaKnown RBP11.49□□□□□ -0.57
SNRPF-203ENST00000551316 NOSIPQ9Y314 301 aaKnown RBP11.49□□□□□ -0.57
SNRPF-203ENST00000551316 PCDHGA11Q9Y5H2 935 aa11.49□□□□□ -0.57
SNRPF-203ENST00000551316 FRAS1Q86XX4 4008 aa11.49□□□□□ -0.57
SNRPF-203ENST00000551316 NR5A2O00482 541 aa11.48□□□□□ -0.57
SNRPF-203ENST00000551316 HOXA3O43365 443 aaPredicted RBP11.48□□□□□ -0.57
SNRPF-203ENST00000551316 BCAS2O75934 225 aaPredicted RBP11.48□□□□□ -0.57
SNRPF-203ENST00000551316 IGHV4-38-2P0DP08 117 aa11.48□□□□□ -0.57
SNRPF-203ENST00000551316 CDH2P19022 906 aaPredicted RBP11.48□□□□□ -0.57
SNRPF-203ENST00000551316 ALDH3B1P43353 468 aa11.48□□□□□ -0.57
SNRPF-203ENST00000551316 CLK3P49761 638 aaKnown RBP11.48□□□□□ -0.57
SNRPF-203ENST00000551316 PROK1P58294 105 aa11.48□□□□□ -0.57
SNRPF-203ENST00000551316 PSPHP78330 225 aa11.48□□□□□ -0.57
SNRPF-203ENST00000551316 DLG1Q12959 904 aa11.48□□□□□ -0.57
SNRPF-203ENST00000551316 HLXQ14774 488 aaPredicted RBP11.48□□□□□ -0.57
SNRPF-203ENST00000551316 ARMCX4Q5H9R4 360 aa11.48□□□□□ -0.57
SNRPF-203ENST00000551316 CDKL4Q5MAI5 379 aa11.48□□□□□ -0.57
SNRPF-203ENST00000551316 SPANXN3Q5MJ09 141 aa11.48□□□□□ -0.57
SNRPF-203ENST00000551316 TSPO2Q5TGU0 170 aa11.48□□□□□ -0.57
SNRPF-203ENST00000551316 METTL4Q8N3J2 472 aa11.48□□□□□ -0.57
SNRPF-203ENST00000551316 C1orf162Q8NEQ5 155 aaPredicted RBP11.48□□□□□ -0.57
SNRPF-203ENST00000551316 NUP37Q8NFH4 326 aa11.48□□□□□ -0.57
SNRPF-203ENST00000551316 RDH5Q92781 318 aa11.48□□□□□ -0.57
SNRPF-203ENST00000551316 MRPL37Q9BZE1 423 aaKnown RBP11.48□□□□□ -0.57
SNRPF-203ENST00000551316 MMP26Q9NRE1 261 aa11.48□□□□□ -0.57
SNRPF-203ENST00000551316 ZNF780BQ9Y6R6 833 aa11.48□□□□□ -0.57
SNRPF-203ENST00000551316 TANC2Q9HCD6 1990 aa11.48□□□□□ -0.57
SNRPF-203ENST00000551316 HUWE1Q7Z6Z7 4374 aaKnown RBP11.47□□□□□ -0.57
SNRPF-203ENST00000551316 A0A1B0GUS0 222 aa11.47□□□□□ -0.57
SNRPF-203ENST00000551316 FOXE1O00358 373 aaPredicted RBP11.47□□□□□ -0.57
SNRPF-203ENST00000551316 CRYAAP02489 173 aa11.47□□□□□ -0.57
SNRPF-203ENST00000551316 KRT14P02533 472 aa11.47□□□□□ -0.57
SNRPF-203ENST00000551316 GP5P40197 560 aa11.47□□□□□ -0.57
SNRPF-203ENST00000551316 ASMTP46597 345 aa11.47□□□□□ -0.57
SNRPF-203ENST00000551316 PRPS1P60891 318 aa11.47□□□□□ -0.57
SNRPF-203ENST00000551316 ATP6AP1LQ52LC2 224 aa11.47□□□□□ -0.57
SNRPF-203ENST00000551316 TMEM107Q6UX40 140 aa11.47□□□□□ -0.57
SNRPF-203ENST00000551316 RAD9BQ6WBX8 426 aa11.47□□□□□ -0.57
SNRPF-203ENST00000551316 CNGA4Q8IV77 575 aa11.47□□□□□ -0.57
SNRPF-203ENST00000551316 B4GALNT2Q8NHY0 566 aa11.47□□□□□ -0.57
SNRPF-203ENST00000551316 ERP27Q96DN0 273 aa11.47□□□□□ -0.57
SNRPF-203ENST00000551316 OR5B2Q96R09 309 aa11.47□□□□□ -0.57
SNRPF-203ENST00000551316 SERPINI1Q99574 410 aa11.47□□□□□ -0.57
SNRPF-203ENST00000551316 ALG9Q9H6U8 611 aa11.47□□□□□ -0.57
SNRPF-203ENST00000551316 TAS2R9Q9NYW1 312 aa11.47□□□□□ -0.57
SNRPF-203ENST00000551316 DCTN4Q9UJW0 460 aa11.47□□□□□ -0.57
SNRPF-203ENST00000551316 ADAM29Q9UKF5 820 aa11.47□□□□□ -0.57
SNRPF-203ENST00000551316 ZNF503-AS2A6NEH8 195 aa11.46□□□□□ -0.57
SNRPF-203ENST00000551316 K7EIL1 84 aa11.46□□□□□ -0.57
SNRPF-203ENST00000551316 UPK1AO00322 258 aa11.46□□□□□ -0.57
SNRPF-203ENST00000551316 NDUFA7O95182 113 aa11.46□□□□□ -0.57
SNRPF-203ENST00000551316 IGLV1-44P01699 117 aa11.46□□□□□ -0.57
SNRPF-203ENST00000551316 IL3P08700 152 aa11.46□□□□□ -0.57
SNRPF-203ENST00000551316 PRKCAP17252 672 aa11.46□□□□□ -0.57
SNRPF-203ENST00000551316 SLC7A1P30825 629 aa11.46□□□□□ -0.57
SNRPF-203ENST00000551316 PHEXP78562 749 aa11.46□□□□□ -0.57
SNRPF-203ENST00000551316 SLC9B1Q4ZJI4 515 aa11.46□□□□□ -0.57
SNRPF-203ENST00000551316 GLE1Q53GS7 698 aaKnown RBP11.46□□□□□ -0.57
SNRPF-203ENST00000551316 LIPJQ5W064 366 aa11.46□□□□□ -0.57
SNRPF-203ENST00000551316 ANKRD16Q6P6B7 361 aa11.46□□□□□ -0.57
SNRPF-203ENST00000551316 FIP1L1Q6UN15 594 aaKnown RBP11.46□□□□□ -0.57
SNRPF-203ENST00000551316 CASP12Q6UXS9 341 aa11.46□□□□□ -0.57
SNRPF-203ENST00000551316 IKBIPQ70UQ0 350 aa11.46□□□□□ -0.57
SNRPF-203ENST00000551316 LRP11Q86VZ4 500 aa11.46□□□□□ -0.57
SNRPF-203ENST00000551316 FBXO30Q8TB52 745 aa11.46□□□□□ -0.57
SNRPF-203ENST00000551316 CFAP36Q96G28 342 aa11.46□□□□□ -0.57
SNRPF-203ENST00000551316 ATOH8Q96SQ7 321 aa11.46□□□□□ -0.57
SNRPF-203ENST00000551316 GPA33Q99795 319 aa11.46□□□□□ -0.57
SNRPF-203ENST00000551316 KCNS3Q9BQ31 491 aa11.46□□□□□ -0.57
SNRPF-203ENST00000551316 LMF2Q9BU23 707 aaKnown RBP11.46□□□□□ -0.57
SNRPF-203ENST00000551316 QRSL1Q9H0R6 528 aaKnown RBP11.46□□□□□ -0.57
SNRPF-203ENST00000551316 KCNF1Q9H3M0 494 aa11.46□□□□□ -0.57
SNRPF-203ENST00000551316 NELFAQ9H3P2 528 aa11.46□□□□□ -0.57
SNRPF-203ENST00000551316 MARCH7Q9H992 704 aa11.46□□□□□ -0.57
SNRPF-203ENST00000551316 TCF7L1Q9HCS4 588 aa11.46□□□□□ -0.57
SNRPF-203ENST00000551316 Q9N2J8 555 aa11.46□□□□□ -0.57
SNRPF-203ENST00000551316 FARSBQ9NSD9 589 aaKnown RBP11.46□□□□□ -0.57
SNRPF-203ENST00000551316 RNF114Q9Y508 228 aa11.46□□□□□ -0.57
SNRPF-203ENST00000551316 SUPT3HB4E1H0 165 aa11.45□□□□□ -0.58
SNRPF-203ENST00000551316 CDC14BO60729 498 aa11.45□□□□□ -0.58
SNRPF-203ENST00000551316 SUPT3HO75486 399 aa11.45□□□□□ -0.58
SNRPF-203ENST00000551316 CLPXO76031 633 aa11.45□□□□□ -0.58
SNRPF-203ENST00000551316 PPP1R3DO95685 299 aa11.45□□□□□ -0.58
SNRPF-203ENST00000551316 TIA1P31483 386 aaKnown RBP eCLIP11.45□□□□□ -0.58
SNRPF-203ENST00000551316 DIO1P49895 249 aa11.45□□□□□ -0.58
SNRPF-203ENST00000551316 TPM4P67936 248 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms