RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 LILRA2Q8N149 483 aa13.85□□□□□ -0.19
PRPF40B-211ENST00000551063 OR52P1PQ8NH57 321 aa13.85□□□□□ -0.19
PRPF40B-211ENST00000551063 BBS10Q8TAM1 723 aa13.85□□□□□ -0.19
PRPF40B-211ENST00000551063 FNDC9Q8TBE3 224 aa13.85□□□□□ -0.19
PRPF40B-211ENST00000551063 INTS12Q96CB8 462 aaKnown RBP13.85□□□□□ -0.19
PRPF40B-211ENST00000551063 PIGMQ9H3S5 423 aa13.85□□□□□ -0.19
PRPF40B-211ENST00000551063 RNF122Q9H9V4 155 aa13.85□□□□□ -0.19
PRPF40B-211ENST00000551063 SLC24A3Q9HC58 644 aa13.85□□□□□ -0.19
PRPF40B-211ENST00000551063 ACER3Q9NUN7 267 aa13.85□□□□□ -0.19
PRPF40B-211ENST00000551063 JKAMPQ9P055 326 aa13.85□□□□□ -0.19
PRPF40B-211ENST00000551063 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.85□□□□□ -0.19
PRPF40B-211ENST00000551063 PRDM4Q9UKN5 801 aa13.85□□□□□ -0.19
PRPF40B-211ENST00000551063 MCTS1Q9ULC4 181 aaKnown RBP13.85□□□□□ -0.19
PRPF40B-211ENST00000551063 ADGRG4Q8IZF6 3080 aa13.85□□□□□ -0.19
PRPF40B-211ENST00000551063 A0A0J9YW62 118 aa13.84□□□□□ -0.19
PRPF40B-211ENST00000551063 A0A1W2PNV4 684 aa13.84□□□□□ -0.19
PRPF40B-211ENST00000551063 C5orf58C9J3I9 102 aa13.84□□□□□ -0.19
PRPF40B-211ENST00000551063 FAAHO00519 579 aa13.84□□□□□ -0.19
PRPF40B-211ENST00000551063 EFNA2O43921 213 aa13.84□□□□□ -0.19
PRPF40B-211ENST00000551063 CXCL13O43927 109 aa13.84□□□□□ -0.19
PRPF40B-211ENST00000551063 ARAFP10398 606 aa13.84□□□□□ -0.19
PRPF40B-211ENST00000551063 UQCRBP14927 111 aa13.84□□□□□ -0.19
PRPF40B-211ENST00000551063 GPX2P18283 190 aa13.84□□□□□ -0.19
PRPF40B-211ENST00000551063 IL11P20809 199 aa13.84□□□□□ -0.19
PRPF40B-211ENST00000551063 ADSLP30566 484 aaPredicted RBP13.84□□□□□ -0.19
PRPF40B-211ENST00000551063 SESN3P58005 492 aa13.84□□□□□ -0.19
PRPF40B-211ENST00000551063 LARS2Q15031 903 aaKnown RBP13.84□□□□□ -0.19
PRPF40B-211ENST00000551063 MAPRE2Q15555 327 aa13.84□□□□□ -0.19
PRPF40B-211ENST00000551063 RUNDC3AQ59EK9 446 aa13.84□□□□□ -0.19
PRPF40B-211ENST00000551063 COQ5Q5HYK3 327 aa13.84□□□□□ -0.19
PRPF40B-211ENST00000551063 RPS26P11Q5JNZ5 115 aaPredicted RBP13.84□□□□□ -0.19
PRPF40B-211ENST00000551063 PLEKHM3Q6ZWE6 761 aa13.84□□□□□ -0.19
PRPF40B-211ENST00000551063 GRINAQ7Z429 371 aa13.84□□□□□ -0.19
PRPF40B-211ENST00000551063 ZNF440Q8IYI8 595 aa13.84□□□□□ -0.19
PRPF40B-211ENST00000551063 ZNF563Q8TA94 476 aa13.84□□□□□ -0.19
PRPF40B-211ENST00000551063 SLC25A43Q8WUT9 341 aaPredicted RBP13.84□□□□□ -0.19
PRPF40B-211ENST00000551063 C10orf82Q8WW14 230 aa13.84□□□□□ -0.19
PRPF40B-211ENST00000551063 CNOT9Q92600 299 aaKnown RBP13.84□□□□□ -0.19
PRPF40B-211ENST00000551063 RNASE6Q93091 150 aaKnown RBP13.84□□□□□ -0.19
PRPF40B-211ENST00000551063 ZNF524Q96C55 264 aa13.84□□□□□ -0.19
PRPF40B-211ENST00000551063 CPPED1Q9BRF8 314 aaPredicted RBP13.84□□□□□ -0.19
PRPF40B-211ENST00000551063 IKZF5Q9H5V7 419 aa13.84□□□□□ -0.19
PRPF40B-211ENST00000551063 TMEM38AQ9H6F2 299 aa13.84□□□□□ -0.19
PRPF40B-211ENST00000551063 SAR1AQ9NR31 198 aa13.84□□□□□ -0.19
PRPF40B-211ENST00000551063 PACSIN3Q9UKS6 424 aa13.84□□□□□ -0.19
PRPF40B-211ENST00000551063 ZNF443Q9Y2A4 671 aaPredicted RBP13.84□□□□□ -0.19
PRPF40B-211ENST00000551063 SPIN1Q9Y657 262 aaPredicted RBP13.84□□□□□ -0.19
PRPF40B-211ENST00000551063 ABCA12Q86UK0 2595 aa13.83□□□□□ -0.19
PRPF40B-211ENST00000551063 CDHR4A6H8M9 788 aa13.83□□□□□ -0.2
PRPF40B-211ENST00000551063 BBIP1A8MTZ0 92 aa13.83□□□□□ -0.2
PRPF40B-211ENST00000551063 EEF1E1-BLOC1S5C9J1V9 151 aa13.83□□□□□ -0.2
PRPF40B-211ENST00000551063 SYT5O00445 386 aa13.83□□□□□ -0.2
PRPF40B-211ENST00000551063 TNFSF11O14788 317 aa13.83□□□□□ -0.2
PRPF40B-211ENST00000551063 SLC22A2O15244 555 aa13.83□□□□□ -0.2
PRPF40B-211ENST00000551063 EEF1E1O43324 174 aaKnown RBP13.83□□□□□ -0.2
PRPF40B-211ENST00000551063 TNFSF13O75888 250 aa13.83□□□□□ -0.2
PRPF40B-211ENST00000551063 SYNGR4O95473 234 aa13.83□□□□□ -0.2
PRPF40B-211ENST00000551063 ETS2P15036 469 aa13.83□□□□□ -0.2
PRPF40B-211ENST00000551063 SHC1P29353 583 aa13.83□□□□□ -0.2
PRPF40B-211ENST00000551063 SFTPDP35247 375 aa13.83□□□□□ -0.2
PRPF40B-211ENST00000551063 APOBEC1P41238 236 aaKnown RBP13.83□□□□□ -0.2
PRPF40B-211ENST00000551063 HTR3AP46098 478 aa13.83□□□□□ -0.2
PRPF40B-211ENST00000551063 EPS8Q12929 822 aa13.83□□□□□ -0.2
PRPF40B-211ENST00000551063 NFYCQ13952 458 aa13.83□□□□□ -0.2
PRPF40B-211ENST00000551063 HBMQ6B0K9 141 aa13.83□□□□□ -0.2
PRPF40B-211ENST00000551063 ZNF836Q6ZNA1 936 aa13.83□□□□□ -0.2
PRPF40B-211ENST00000551063 DMRTC2Q8IXT2 367 aaPredicted RBP13.83□□□□□ -0.2
PRPF40B-211ENST00000551063 C10orf111Q8N326 155 aa13.83□□□□□ -0.2
PRPF40B-211ENST00000551063 MAL2Q969L2 176 aa13.83□□□□□ -0.2
PRPF40B-211ENST00000551063 CPNE4Q96A23 557 aaPredicted RBP13.83□□□□□ -0.2
PRPF40B-211ENST00000551063 ANKRD27Q96NW4 1050 aa13.83□□□□□ -0.2
PRPF40B-211ENST00000551063 CGREF1Q99674 301 aa13.83□□□□□ -0.2
PRPF40B-211ENST00000551063 PRRG4Q9BZD6 226 aa13.83□□□□□ -0.2
PRPF40B-211ENST00000551063 TRIM8Q9BZR9 551 aa13.83□□□□□ -0.2
PRPF40B-211ENST00000551063 ARMC7Q9H6L4 198 aa13.83□□□□□ -0.2
PRPF40B-211ENST00000551063 COQ10BQ9H8M1 238 aa13.83□□□□□ -0.2
PRPF40B-211ENST00000551063 TIGARQ9NQ88 270 aa13.83□□□□□ -0.2
PRPF40B-211ENST00000551063 SERINC1Q9NRX5 453 aa13.83□□□□□ -0.2
PRPF40B-211ENST00000551063 IFT52Q9Y366 437 aa13.83□□□□□ -0.2
PRPF40B-211ENST00000551063 ARHGAP21Q5T5U3 1957 aa13.83□□□□□ -0.2
PRPF40B-211ENST00000551063 KIAA1549Q9HCM3 1950 aa13.82□□□□□ -0.2
PRPF40B-211ENST00000551063 PCNX3Q9H6A9 2034 aa13.82□□□□□ -0.2
PRPF40B-211ENST00000551063 CFAP73A6NFT4 308 aa13.82□□□□□ -0.2
PRPF40B-211ENST00000551063 ADAM11O75078 769 aa13.82□□□□□ -0.2
PRPF40B-211ENST00000551063 AQP8O94778 261 aa13.82□□□□□ -0.2
PRPF40B-211ENST00000551063 PGM3O95394 542 aa13.82□□□□□ -0.2
PRPF40B-211ENST00000551063 PABPC4LP0CB38 370 aaKnown RBP13.82□□□□□ -0.2
PRPF40B-211ENST00000551063 SLC7A1P30825 629 aa13.82□□□□□ -0.2
PRPF40B-211ENST00000551063 RYKP34925 604 aa13.82□□□□□ -0.2
PRPF40B-211ENST00000551063 AGFG1P52594 562 aaKnown RBP13.82□□□□□ -0.2
PRPF40B-211ENST00000551063 CDK6Q00534 326 aa13.82□□□□□ -0.2
PRPF40B-211ENST00000551063 MERTKQ12866 999 aa13.82□□□□□ -0.2
PRPF40B-211ENST00000551063 KLF10Q13118 480 aa13.82□□□□□ -0.2
PRPF40B-211ENST00000551063 GUSBP1Q15486 140 aa13.82□□□□□ -0.2
PRPF40B-211ENST00000551063 ZNF239Q16600 458 aaKnown RBP13.82□□□□□ -0.2
PRPF40B-211ENST00000551063 TRMT5Q32P41 509 aaKnown RBP13.82□□□□□ -0.2
PRPF40B-211ENST00000551063 TMEM176BQ3YBM2 270 aaPredicted RBP13.82□□□□□ -0.2
PRPF40B-211ENST00000551063 ZNF550Q7Z398 422 aa13.82□□□□□ -0.2
PRPF40B-211ENST00000551063 VRK2Q86Y07 508 aa13.82□□□□□ -0.2
PRPF40B-211ENST00000551063 OSTF1Q92882 214 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms